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Lsi02G027310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionlate embryogenesis abundant protein 1
Genome locationchr02:33617321..33618564
RNA-Seq ExpressionLsi02G027310
SyntenyLsi02G027310
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058773.1 late embryogenesis abundant protein 1 [Cucumis melo var. makuwa]1.6e-3073.33Show/hide
Query:  MASHQD-ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSN------
        MASHQD +SHKAGE VGQAQVKKDE+MNQ            + HDQSA QTASDLKDQAANFLQQTGEQVKN+AQGAAEAVKNTLGMNTDNTSN      
Subjt:  MASHQD-ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSN------

Query:  ----TNNPTNNPTNNPSTRI
            T NP+NNPTNNPSTRI
Subjt:  ----TNNPTNNPTNNPSTRI

XP_022964497.1 late embryogenesis abundant protein 1 [Cucurbita moschata]3.6e-3075.68Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT
        MAS QDISH  GE VGQAQVKKDE++NQA+++A +AKD AST     SAAQTASDLKDQAANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    T
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT

Query:  NNPTNNPSTRI
        NNPTN PS  I
Subjt:  NNPTNNPSTRI

XP_023000409.1 late embryogenesis abundant protein 1 [Cucurbita maxima]1.9e-3177.48Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT
        MAS QDISH  GE+VGQAQVKKDE+MNQA++AA +AKD AST     SAAQTASDLKDQAANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    T
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT

Query:  NNPTNNPSTRI
        NNPTN PS  I
Subjt:  NNPTNNPSTRI

XP_023515217.1 late embryogenesis abundant protein 1-like [Cucurbita pepo subsp. pepo]5.6e-3176.58Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT
        MAS QDISH  GE+VGQAQVKKDE++NQA++AA +AKD AST     SAAQTASDLKDQAANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    T
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT

Query:  NNPTNNPSTRI
        NNPTN PS  I
Subjt:  NNPTNNPSTRI

XP_038899752.1 late embryogenesis abundant protein 2-like [Benincasa hispida]2.0e-4493.58Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNN
        MASHQDISHKAGEIVGQAQVKKDEI+NQASHAAHD+KDKASTHDQS AQTAS+LKDQAANFLQQTGEQVKN+AQGAA+AVKNTLGMNTDNT NTNNPTNN
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNN

Query:  PTNNPSTRI
        PTNNPSTRI
Subjt:  PTNNPSTRI

TrEMBL top hitse value%identityAlignment
A0A0A0K8V2 Uncharacterized protein4.8e-2870.34Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQ-SAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNT-----
        MASHQD+SHKA EIVGQAQVK+DE+MNQ            +T DQ SAAQTA+DLKDQAA+FLQQTGEQVKN+AQGAAEAVKNTLGMNTDNTSNT     
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQ-SAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNT-----

Query:  -----NNPTNNPTNNPST
             NNPTNNP NNP++
Subjt:  -----NNPTNNPTNNPST

A0A1S3CF46 late embryogenesis abundant protein 13.0e-3077.98Show/hide
Query:  MASHQD-ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTS--NTNNP
        MASHQD +SHKAGE VGQAQVKKDE+MNQ            + HDQSA QTASDLKDQAANFLQQTGEQVKN+AQGAAEAVKNTLGMNTDNTS  N+NNP
Subjt:  MASHQD-ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTS--NTNNP

Query:  TNNPTNNPS
        TNNPT NPS
Subjt:  TNNPTNNPS

A0A5D3CF20 Late embryogenesis abundant protein 17.9e-3173.33Show/hide
Query:  MASHQD-ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSN------
        MASHQD +SHKAGE VGQAQVKKDE+MNQ            + HDQSA QTASDLKDQAANFLQQTGEQVKN+AQGAAEAVKNTLGMNTDNTSN      
Subjt:  MASHQD-ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSN------

Query:  ----TNNPTNNPTNNPSTRI
            T NP+NNPTNNPSTRI
Subjt:  ----TNNPTNNPTNNPSTRI

A0A6J1HHY8 late embryogenesis abundant protein 11.8e-3075.68Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT
        MAS QDISH  GE VGQAQVKKDE++NQA+++A +AKD AST     SAAQTASDLKDQAANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    T
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT

Query:  NNPTNNPSTRI
        NNPTN PS  I
Subjt:  NNPTNNPSTRI

A0A6J1KJU5 late embryogenesis abundant protein 19.3e-3277.48Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT
        MAS QDISH  GE+VGQAQVKKDE+MNQA++AA +AKD AST     SAAQTASDLKDQAANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    T
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT

Query:  NNPTNNPSTRI
        NNPTN PS  I
Subjt:  NNPTNNPSTRI

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 16.5e-0637.76Show/hide
Query:  ASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTN
        A+  +    A     + Q   +    +A      A++K S   QS  +TA   KD +A FLQQTGE+VK +AQGA +AVK T GM  D+    + PTN
Subjt:  ASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTN

O49817 Late embryogenesis abundant protein 23.8e-0639.39Show/hide
Query:  QDISHKAGEIVGQAQVKKDEIMNQASHAAHD----AKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTN
        Q    K  +    A+ K  +        A D    AK+K S   QS  +TA   KD +A FLQQTGE+ K +AQGA +AVK T GM  D+    + PTN
Subjt:  QDISHKAGEIVGQAQVKKDEIMNQASHAAHD----AKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTN

Q96270 Late embryogenesis abundant protein 75.0e-0635.09Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIM----------------------NQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAE
        MASHQ+ S+KAGE  G+AQ K  E M                       +A   A  AKDK S   Q+  + A + KD+  +++ +TGE +KN A  AAE
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIM----------------------NQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAE

Query:  AVKNTLGMNTDNTS
          K T     + TS
Subjt:  AVKNTLGMNTDNTS

Q9LW12 Late embryogenesis abundant protein 297.9e-0435.58Show/hide
Query:  QDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNN
        ++   KAG  + +     + I N+A  AA   K+ A    Q   +TA   +D+   FL QTGE VK +A GAA+AVK+T GM T+     + P +  T  
Subjt:  QDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNN

Query:  PSTR
         +TR
Subjt:  PSTR

Arabidopsis top hitse value%identityAlignment
AT1G15415.1 The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol.6.7e-0637.96Show/hide
Query:  MASHQD--ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT
        MAS QD   S +AG+IVGQA VK+++  N +                           QA+ FLQQ GE+VK++A  A+EAVKN LG+N DN     N  
Subjt:  MASHQD--ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPT

Query:  NNPTNNPS
             NP+
Subjt:  NNPTNNPS

AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related2.3e-1445.61Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASD-----LKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTN
        M+S Q +SH AGE+ GQ Q+KK+E +N  SHA +   D   TH QS   +  D     L  QA++ +QQTG QVKN+AQGAA+AVKNTLGM+    S ++
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASD-----LKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTN

Query:  NPTNNPTNNPSTRI
              +N P ++I
Subjt:  NPTNNPTNNPSTRI

AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein3.5e-0735.09Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIM----------------------NQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAE
        MASHQ+ S+KAGE  G+AQ K  E M                       +A   A  AKDK S   Q+  + A + KD+  +++ +TGE +KN A  AAE
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIM----------------------NQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAE

Query:  AVKNTLGMNTDNTS
          K T     + TS
Subjt:  AVKNTLGMNTDNTS

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein3.5e-0735.09Show/hide
Query:  MASHQDISHKAGEIVGQAQVKKDEIM----------------------NQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAE
        MASHQ+ S+KAGE  G+AQ K  E M                       +A   A  AKDK S   Q+  + A + KD+  +++ +TGE +KN A  AAE
Subjt:  MASHQDISHKAGEIVGQAQVKKDEIM----------------------NQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAE

Query:  AVKNTLGMNTDNTS
          K T     + TS
Subjt:  AVKNTLGMNTDNTS

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein6.0e-0739.39Show/hide
Query:  AGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDL----------------------KDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMN
        AG+  GQAQ K ++    A   A  A DK +   QSA   A+DL                      ++QAA    QTGE VKN+AQGA + VKN+LGMN
Subjt:  AGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDL----------------------KDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCCATCAGGATATTAGCCACAAGGCTGGTGAGATTGTTGGCCAAGCTCAGGTAAAGAAAGACGAGATTATGAACCAAGCATCTCATGCAGCTCATGATGCCAA
AGACAAGGCTTCTACGCATGACCAATCTGCCGCCCAAACTGCCTCTGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGACTGGGGAGCAAGTGAAGAACATAGCAC
AAGGAGCAGCTGAGGCAGTAAAAAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAATCCAACCAACAACCCTACCAACAATCCATCCACTAGAATTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAATAGGCTAATTCACCAACTAAAATTAGCATTTTCAACCTCTATATAATGTCTGATTTTGATTAACTTTTCAGAGCATCCCTTTTCATACTTTCATTTATTCATTTT
TTTTTCTTCTTTCTATTCTCTAATCTTTTGAGTTTAAAACAAAAAACAAAAAATTCAATTCAGAAATGGCAAGCCATCAGGATATTAGCCACAAGGCTGGTGAGATTGTT
GGCCAAGCTCAGGTAAAGAAAGACGAGATTATGAACCAAGCATCTCATGCAGCTCATGATGCCAAAGACAAGGCTTCTACGCATGACCAATCTGCCGCCCAAACTGCCTC
TGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGACTGGGGAGCAAGTGAAGAACATAGCACAAGGAGCAGCTGAGGCAGTAAAAAACACACTTGGGATGAACACTG
ATAACACTTCAAACACCAACAATCCAACCAACAACCCTACCAACAATCCATCCACTAGAATTTAAAACATGAAGCTTTAATTACTTCATTTTTTTTTATTTTCTATCTTT
TAAATTTTTTAATTATCTTCTTTTTGGTGTTTTAATTAAATTTTATTTTTTCATATGCTCGACTGAAAATGAGCAAATGAAAGATAAGTTTTCTGTATAAATAATTGAAA
GGAAGAGTGTGATGTATGGATCCCCTTCCTTTTCATAATTAAATTTCTAGTTTTGTTGCCCTAATTTCTTTTGTGTCCCTTAATTAATTTTGTTACATATTTGCTTTACT
ATACTTTATCATAGAAATAAAAATATAT
Protein sequenceShow/hide protein sequence
MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTRI