CuGenDBv2

Gene ID	Lsi02G027320
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	WD repeat-containing protein 43
Genome location	chr02:33623000..33626831
RNA-Seq Expression	Lsi02G027320
Synteny	Lsi02G027320
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0005730 - nucleolus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001680 - WD40 repeat IPR007148 - Small-subunit processome, Utp12 IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily IPR015943 - WD40/YVTN repeat-like-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058775.1 WD repeat-containing protein 43 [Cucumis melo var. makuwa]

3.8e-297

90.56

Show/hide

Query:  IWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDT
        IWST DGSLL EWKD DGK+D GYSCMACC LGKKRK+SYCVVAIGTN GDVLAVNASNGE+KWVS GCHPGGVIGLSFAN+GRRLHTVGSNGMASEMDT
Subjt:  IWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDT

Query:  ETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTIITSELGAKHLQVWWCDMSAGKFSRGPVLSMKH
        ETGNIIKEFKASK+SISSS FSLD KYLAVAGKKLKILS DDGDEL+VHPD+L P+KLVS+SDDAKTIITSELGAKHLQVWWCDMSAGKFSRGPVLSM H
Subjt:  ETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTIITSELGAKHLQVWWCDMSAGKFSRGPVLSMKH

Query:  PPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVSVIASRIHSVGENEVSVLVTHGSMDLPQHSLF
        PPFVSECRN+SNQEDSVV+LSVSVSG AYLWKLK+LS+DEV PTKVSVKANDNQSAEENH SAKKNRVSV+ASRIH +G+NEVSVLVTHGS+DLPQHSL 
Subjt:  PPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVSVIASRIHSVGENEVSVLVTHGSMDLPQHSLF

Query:  NIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEG
        +IGY+VKED NTAHENKTLQQND +SEQGPHEIEQVI PKSKKSKKKRAASDLDS TAGDVSDVGNGDASDV+FNDDLNEPSMGEKLASLNL DQNED G
Subjt:  NIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEG

Query:  REQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESS
        REQE+PSVPVIPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+ISFIQSRGAILVCALPWLRGLLLQHASKIMSQESS
Subjt:  REQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESS

Query:  LLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE
        LLALNSLYQLIE+RISTFQSALLLSSSLDFL+TGVLDEE N+NDAIVPIIYEE++SDENE+GDEMETDED ERD+VEAFDDLSAGEVDDDMSE
Subjt:  LLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE

XP_004136081.1 WD repeat-containing protein 43 isoform X2 [Cucumis sativus]

4.8e-308

88.94

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC
        MK EILKS PI AFTPDGDYLAI+SSNGTLKIWST DGSLL EWKD DGKND GYSCMACCFLGKKRK+SYCVVAIGTN GDVLAVNASNGE+KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII
        HPGGVIGLSFANKG RL TVGSNGMASEMDTETGNIIKEFKASK+SISSS FSLD +YL VAGKKLKILSTDDGDEL+VHPD+LGP+KLVS+SDDAKTII
Subjt:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII

Query:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS
        TSELGAKHLQVWWC++SAGKFSRGP+LSMKHPPFVSECRN+SNQEDSVV+LSVSVSG AYLWKLK+LS+DEV+PTKVSVKANDNQSAEENH SAKKNR S
Subjt:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS

Query:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDA
        V+ASRIH +G+NEVSVLVTHGS+DLPQH+L +IGY+VKED NTAHENKTLQQND +SEQGPHEIEQVITPKSKKSKKKRAAS+LDSLTAGDVSDVGNGD 
Subjt:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDA

Query:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI
        SDVLFNDDLNEPSMGEKLASLNL DQN+D GREQE+PSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL LLH+LISFI
Subjt:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI

Query:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDE
        QSRGAILVCALPWLR L+LQHASKIMSQESSLLALNSLYQLIESR STFQSALLLSSSLDFL+T VLD+E N+ND IVPIIYEE++SDENE+GDEMET+E
Subjt:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDE

Query:  DGERDKVEAFDDLSAGEVDDDMSE
        D ERD+VEAFDDLSAGEVDDDMSE
Subjt:  DGERDKVEAFDDLSAGEVDDDMSE

XP_008461080.1 PREDICTED: WD repeat-containing protein 43 [Cucumis melo]

0.0e+00

90.54

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC
        MKKEILKSPPITAFTPDGDYLAI SSNGTLKIWST DGSLL EWKD DGK+D GYSCMACC LGKKRK+SYC+VAIGTN GDVLAVNASNGE+KWVS GC
Subjt:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII
        HPGGVIGLSFAN+GRRLHTVGSNGMASEMDTETGNIIKEFKASK+SISSS FSLD KYLAVAGKKLKILS DDGDEL+VHPD+L P+KLVS+SDDAKTI+
Subjt:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII

Query:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS
        TSELGAKHLQVWWCDMSAGKFSRGPVLSM HPPFVSECRN+SNQEDSVV+LSVSVSG AYLWKLK+LS+DEV PTKVSVKANDNQSAEENH SAKKNRVS
Subjt:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS

Query:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDA
        V+AS+IH +G+NEVSVLVTHGS+DLPQHSL +IGY+VKED NTAHENKTLQQND +SEQGPHEIEQVITPKSKKSKKKRAASDLDS TAGDVSDVGNGDA
Subjt:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDA

Query:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI
        SDV+FNDDLNEPSMGEKLASLNL DQNED GREQE+PSVPVIPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+ISFI
Subjt:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI

Query:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDE
        QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFL+TGVLDEE N+NDAIVPIIYEE++SDENE+GDEMETDE
Subjt:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDE

Query:  DGERDKVEAFDDLSAGEVDDDMSE
        D ERD+VEAFDDLSAGEVDDDMSE
Subjt:  DGERDKVEAFDDLSAGEVDDDMSE

XP_031744699.1 WD repeat-containing protein 43 isoform X1 [Cucumis sativus]

7.6e-306

87.82

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC
        MK EILKS PI AFTPDGDYLAI+SSNGTLKIWST DGSLL EWKD DGKND GYSCMACCFLGKKRK+SYCVVAIGTN GDVLAVNASNGE+KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII
        HPGGVIGLSFANKG RL TVGSNGMASEMDTETGNIIKEFKASK+SISSS FSLD +YL VAGKKLKILSTDDGDEL+VHPD+LGP+KLVS+SDDAKTII
Subjt:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII

Query:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS
        TSELGAKHLQVWWC++SAGKFSRGP+LSMKHPPFVSECRN+SNQEDSVV+LSVSVSG AYLWKLK+LS+DEV+PTKVSVKANDNQSAEENH SAKKNR S
Subjt:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS

Query:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSD------
        V+ASRIH +G+NEVSVLVTHGS+DLPQH+L +IGY+VKED NTAHENKTLQQND +SEQGPHEIEQVITPKSKKSKKKRAAS+LDSLTAGDVSD      
Subjt:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSD------

Query:  --VGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKL
          VGNGD SDVLFNDDLNEPSMGEKLASLNL DQN+D GREQE+PSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL L
Subjt:  --VGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKL

Query:  LHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENES
        LH+LISFIQSRGAILVCALPWLR L+LQHASKIMSQESSLLALNSLYQLIESR STFQSALLLSSSLDFL+T VLD+E N+ND IVPIIYEE++SDENE+
Subjt:  LHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENES

Query:  GDEMETDEDGERDKVEAFDDLSAGEVDDDMSE
        GDEMET+ED ERD+VEAFDDLSAGEVDDDMSE
Subjt:  GDEMETDEDGERDKVEAFDDLSAGEVDDDMSE

XP_038899613.1 WD repeat-containing protein 43 [Benincasa hispida]

0.0e+00

91.84

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC
        MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWST DGSLL EWKD DGKNDVGYSCMACCF GKKRKNSYCVVA+GTN GDVLAVNASNGERKWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII
        H GGVIGLSFANKGRRLH VGSNG  SEMDTETGNIIKEFKASK+SISSS FSLD KYLAVAGKKLKILS DDGDELMVHPD+LGP+KLVSLSDDAKTII
Subjt:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII

Query:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS
        TSELGAKHLQVWWCDMSAGK SRGPVLSMKHPPFVSECRN+SNQED+VV+LSVSVSGVAYLWKLKILS+DEVSPTKVSVKANDNQSAEENH SAKKNRVS
Subjt:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS

Query:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQN-DLSEQGPHEIEQ-VITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD
        VIASRI+ VG+NEVSVLVTHGSMDLPQHSLF+IGYSVKEDVNTA  NKTLQQN D SEQGPHE+EQ V+TPKSKK KKKRAASDLDSLT GD+SDVGNGD
Subjt:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQN-DLSEQGPHEIEQ-VITPKSKKSKKKRAASDLDSLTAGDVSDVGNGD

Query:  ASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF
        ASDV+FNDDLNEPSMGEKLASLNLVDQNEDEGRE +EPSVP IPPSADSVQVLLKQALHA+DR LLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF
Subjt:  ASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISF

Query:  IQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETD
        IQSRGAILVC LPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFL++GVLDEEV+ENDAIVPIIYEED+SD+ ESGDEMETD
Subjt:  IQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETD

Query:  EDGERDKVEAFDDLSAGEVDDDMSE
        ED ERD+VEAFDDLSAGEVDDDMSE
Subjt:  EDGERDKVEAFDDLSAGEVDDDMSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBW9 Utp12 domain-containing protein

2.3e-308

88.94

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC
        MK EILKS PI AFTPDGDYLAI+SSNGTLKIWST DGSLL EWKD DGKND GYSCMACCFLGKKRK+SYCVVAIGTN GDVLAVNASNGE+KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII
        HPGGVIGLSFANKG RL TVGSNGMASEMDTETGNIIKEFKASK+SISSS FSLD +YL VAGKKLKILSTDDGDEL+VHPD+LGP+KLVS+SDDAKTII
Subjt:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII

Query:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS
        TSELGAKHLQVWWC++SAGKFSRGP+LSMKHPPFVSECRN+SNQEDSVV+LSVSVSG AYLWKLK+LS+DEV+PTKVSVKANDNQSAEENH SAKKNR S
Subjt:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS

Query:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDA
        V+ASRIH +G+NEVSVLVTHGS+DLPQH+L +IGY+VKED NTAHENKTLQQND +SEQGPHEIEQVITPKSKKSKKKRAAS+LDSLTAGDVSDVGNGD 
Subjt:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDA

Query:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI
        SDVLFNDDLNEPSMGEKLASLNL DQN+D GREQE+PSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKD KVISKSIAQLNSSDVL LLH+LISFI
Subjt:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI

Query:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDE
        QSRGAILVCALPWLR L+LQHASKIMSQESSLLALNSLYQLIESR STFQSALLLSSSLDFL+T VLD+E N+ND IVPIIYEE++SDENE+GDEMET+E
Subjt:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDE

Query:  DGERDKVEAFDDLSAGEVDDDMSE
        D ERD+VEAFDDLSAGEVDDDMSE
Subjt:  DGERDKVEAFDDLSAGEVDDDMSE

A0A1S3CDX9 WD repeat-containing protein 43

0.0e+00

90.54

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC
        MKKEILKSPPITAFTPDGDYLAI SSNGTLKIWST DGSLL EWKD DGK+D GYSCMACC LGKKRK+SYC+VAIGTN GDVLAVNASNGE+KWVS GC
Subjt:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII
        HPGGVIGLSFAN+GRRLHTVGSNGMASEMDTETGNIIKEFKASK+SISSS FSLD KYLAVAGKKLKILS DDGDEL+VHPD+L P+KLVS+SDDAKTI+
Subjt:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII

Query:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS
        TSELGAKHLQVWWCDMSAGKFSRGPVLSM HPPFVSECRN+SNQEDSVV+LSVSVSG AYLWKLK+LS+DEV PTKVSVKANDNQSAEENH SAKKNRVS
Subjt:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS

Query:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDA
        V+AS+IH +G+NEVSVLVTHGS+DLPQHSL +IGY+VKED NTAHENKTLQQND +SEQGPHEIEQVITPKSKKSKKKRAASDLDS TAGDVSDVGNGDA
Subjt:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDA

Query:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI
        SDV+FNDDLNEPSMGEKLASLNL DQNED GREQE+PSVPVIPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+ISFI
Subjt:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI

Query:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDE
        QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFL+TGVLDEE N+NDAIVPIIYEE++SDENE+GDEMETDE
Subjt:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDE

Query:  DGERDKVEAFDDLSAGEVDDDMSE
        D ERD+VEAFDDLSAGEVDDDMSE
Subjt:  DGERDKVEAFDDLSAGEVDDDMSE

A0A5A7UYX1 WD repeat-containing protein 43

1.8e-297

90.56

Show/hide

Query:  IWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDT
        IWST DGSLL EWKD DGK+D GYSCMACC LGKKRK+SYCVVAIGTN GDVLAVNASNGE+KWVS GCHPGGVIGLSFAN+GRRLHTVGSNGMASEMDT
Subjt:  IWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDT

Query:  ETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTIITSELGAKHLQVWWCDMSAGKFSRGPVLSMKH
        ETGNIIKEFKASK+SISSS FSLD KYLAVAGKKLKILS DDGDEL+VHPD+L P+KLVS+SDDAKTIITSELGAKHLQVWWCDMSAGKFSRGPVLSM H
Subjt:  ETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTIITSELGAKHLQVWWCDMSAGKFSRGPVLSMKH

Query:  PPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVSVIASRIHSVGENEVSVLVTHGSMDLPQHSLF
        PPFVSECRN+SNQEDSVV+LSVSVSG AYLWKLK+LS+DEV PTKVSVKANDNQSAEENH SAKKNRVSV+ASRIH +G+NEVSVLVTHGS+DLPQHSL 
Subjt:  PPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVSVIASRIHSVGENEVSVLVTHGSMDLPQHSLF

Query:  NIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEG
        +IGY+VKED NTAHENKTLQQND +SEQGPHEIEQVI PKSKKSKKKRAASDLDS TAGDVSDVGNGDASDV+FNDDLNEPSMGEKLASLNL DQNED G
Subjt:  NIGYSVKEDVNTAHENKTLQQND-LSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEG

Query:  REQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESS
        REQE+PSVPVIPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+ISFIQSRGAILVCALPWLRGLLLQHASKIMSQESS
Subjt:  REQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESS

Query:  LLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE
        LLALNSLYQLIE+RISTFQSALLLSSSLDFL+TGVLDEE N+NDAIVPIIYEE++SDENE+GDEMETDED ERD+VEAFDDLSAGEVDDDMSE
Subjt:  LLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE

A0A6J1D938 WD repeat-containing protein 43

6.9e-289

85.76

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKK--RKNSYCVVAIGTNIGDVLAVNASNGERKWVSA
        MKKE+LKSPPITAFTPDGDYLAILS N T+KIWS  DGSLL EWKDS+GK DVGYSC+ACCF+ KK  +K S CV+AIGT+ GDVLAVNAS+GE KWVSA
Subjt:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKK--RKNSYCVVAIGTNIGDVLAVNASNGERKWVSA

Query:  GCHPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKT
        GCH GGVIGLSFANKGRRL TVGSNGMASEMDTETGNIIKEFKASK+SISSS FS D KYLAVAGKKL+ILSTD+GDELMVH D+LGP+KLVS+SDDAK 
Subjt:  GCHPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKT

Query:  IITSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNR
        IITSE GAKHLQVWWCDMSA K SRGPVLSMKHPPFVSEC+NISN+EDS+V+LSVSVSGVAY+W+LKILS+DEVSP KV+VKAND QSAEENH SAKKNR
Subjt:  IITSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNR

Query:  VSVIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQN-DLSEQGPHEIEQ-VITPKSKKSKKKRAASDLDSLTAGDVSDVGN
        +SVIASRI   G+NEVSVLVTHGSMD PQ SLFNIGYSVKED+NTAHE KTLQQN D S QGPHEIEQ V TPKSKKSKKKRAASD+DSLTAGDVS VGN
Subjt:  VSVIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQN-DLSEQGPHEIEQ-VITPKSKKSKKKRAASDLDSLTAGDVSDVGN

Query:  GDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLI
        GDASDVLFNDD+NEP+MGEKLASLNL+DQ+EDE  EQEEPSVP IPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLI
Subjt:  GDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLI

Query:  SFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYE-EDESDENESGDEM
        S IQSRGAILVCALPWLRGLLLQHAS+IMSQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFL+TGVLDEEV++NDAIVPIIYE ED+SD+ ESGDEM
Subjt:  SFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYE-EDESDENESGDEM

Query:  ETDED-GERDKVEAFDDLSAGEVDD
        ETDED  E ++ EAF DLSAGEVDD
Subjt:  ETDED-GERDKVEAFDDLSAGEVDD

A0A6J1HJF3 WD repeat-containing protein 43 isoform X1

3.6e-277

81.44

Show/hide

Query:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC
        MK E  KSPPITAFTP+GDYLAILSSNGT+KIW+T DGSLL EWKD DGK D GYSC+ACCF+GKKRKNS C++AIGTN GDVL VNAS+GE KWVSAGC
Subjt:  MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGC

Query:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII
        H GGVIGLSFA+KGRRLHTVGSNG+A +M+ ETG+II EFKASK+SISSS FSLD KYLAVAGKKLKILSTDDG ELMVHPD+LGP+KL S+SDDAKTII
Subjt:  HPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTII

Query:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS
        TSE GAKH+QVWWCDMSAGK SRGPVLSMKHPPFVSECRNI+N EDS+V+LSVSVSGVAYLWKLK LS+D+V+PTKV+VK N+ +SAEENH SAKKNR+S
Subjt:  TSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVS

Query:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQNDLSEQGPHEIEQVIT-PKSKKSKKKRAASDLDSLTAGDVSDVGNGDA
        V++S I  +G+NEVSVLVTHGSMDLPQH++ NIGY  KED N A          L ++GPHEI+Q +T PKSKKSKKKRAASDLDS  AGDVSDVGN D 
Subjt:  VIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQNDLSEQGPHEIEQVIT-PKSKKSKKKRAASDLDSLTAGDVSDVGNGDA

Query:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI
        S+VLFNDDLNEP+MG+KLASLNL +QNEDE  EQ+EPSVP IPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH+LIS I
Subjt:  SDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFI

Query:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENE-SGDEMETD
        QSRGAILVCA+PWLRGLLLQHAS+IMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFL+TGVLDEE  ENDAIVPIIYEED+SD+ E SGDEMETD
Subjt:  QSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENE-SGDEMETD

Query:  EDGERDKVEAFDDLSAGEVDDDMSE
        E+G   +VEAFDDLSAGEVDDDMSE
Subjt:  EDGERDKVEAFDDLSAGEVDDDMSE

SwissProt top hits

e value

%identity

Alignment

Q15061 WD repeat-containing protein 43

9.2e-12

22.92

Show/hide

Query:  AFTPDGD-YLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFL---------GKKRK-------NSYCVVAIGTNIGDVLAVNASNGE--R
        AF+P    Y A+ S++G L++W T +  L  E+  S   +    +C+A              KKRK       N   ++A+GT +G +L  +   GE   
Subjt:  AFTPDGD-YLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFL---------GKKRK-------NSYCVVAIGTNIGDVLAVNASNGE--R

Query:  KWVSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLS
        K +S G H   V  + +      L++   +    E + +T  +  ++K    S+SS   S D K L  AG+ +K+   +  +          P+  +  +
Subjt:  KWVSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLS

Query:  D----------DAKTIITSELGAKH---LQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVK
                   D  T +    GA H   L VW       + S     ++   P   +     N+E+ V +  V   G  +L++  IL+     P   +  
Subjt:  D----------DAKTIITSELGAKH---LQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVK

Query:  ANDNQSAEENHESAKKNRVSVIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQNDLSEQGPHEIEQVIT---PKSKKSKKK
               +    + K   + ++A+   S   +++S+L+ +GS   P         +++     + E       D+S     ++E  IT        S+ K
Subjt:  ANDNQSAEENHESAKKNRVSVIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQNDLSEQGPHEIEQVIT---PKSKKSKKK

Query:  RAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVIS
             +    A         +  +       NE S+ E+L ++++      +G+E  +          +S  VLL Q L ++D  +L + L T++  +I 
Subjt:  RAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVIS

Query:  KSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAI-
        K++ ++    ++ LL  L   +Q      V  + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E  +     
Subjt:  KSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAI-

Query:  ---VPIIYEEDESDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE
             ++YEE ES E ES DE+  D+D E D  +  ++ S  E D+D+ E
Subjt:  ---VPIIYEEDESDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE

Q6ZQL4 WD repeat-containing protein 43

5.4e-12

22.37

Show/hide

Query:  AFTPDGD-YLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACC---------FLGKKRKNSYC-------VVAIGTNIGDVLAVNASNGE-RK
        AF+PD   Y A+ SS+G L++W T +  L  E+  S   +    +C+A              KKRK+          ++A+GT +G +L  +   GE   
Subjt:  AFTPDGD-YLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACC---------FLGKKRKNSYC-------VVAIGTNIGDVLAVNASNGE-RK

Query:  WVSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGD---ELMVHPDQLGPMKLVS
         +++G H   V  + +      L++   +    E  T+T  +  ++K    S+SS   S D K L  AG+ +K+   +  +       H   +  ++  +
Subjt:  WVSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGD---ELMVHPDQLGPMKLVS

Query:  L------SDDAKTIITSELGAKH---LQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKAN
        +        D  T +    GA H   L VW       + S     ++   P   +     N+E+ V +  V   G  +L++  IL+     P  ++    
Subjt:  L------SDDAKTIITSELGAKH---LQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKAN

Query:  DNQSAEENHESAKKNRVSVIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQNDLSEQGPHEIEQVITPKSKKSKKKRAASD
           +     +      + ++A+   S   +++S+L+ +G+   P         +++     + +     + D+S      +E  IT K K       A  
Subjt:  DNQSAEENHESAKKNRVSVIASRIHSVGENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQNDLSEQGPHEIEQVITPKSKKSKKKRAASD

Query:  LDSLTAGDVSDVGNGDASDVLFND----DLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISK
        L     G  + +    A      +       E ++ E+L +++L    + +GR+ +           +S  VLL Q L ++D  +L + L TK+  +I +
Subjt:  LDSLTAGDVSDVGNGDASDVLFND----DLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISK

Query:  SIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNEN----D
        ++ ++    V+ LL  L   +Q         + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E ++      
Subjt:  SIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNEN----D

Query:  AIVPIIYEE--------DESDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE
            ++YEE        DE  E +S D  + DED + +K E  D+    E D+DM +
Subjt:  AIVPIIYEE--------DESDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE

Arabidopsis top hits

e value

%identity

Alignment

AT1G15420.1 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).

8.7e-50

50.19

Show/hide

Query:  KSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVP--VIPPSADSVQVLLKQALHADDRALLLEC
        K KK  KKRA  + D  +  D     + D   VL +D LNEP++G+KL SL+L++  +    E    S P    PP+A SV VLL+QALHADDR+LLL+C
Subjt:  KSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVP--VIPPSADSVQVLLKQALHADDRALLLEC

Query:  LYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLD
        LY +D++VI+ S+A+LNS++VLKLL++L+  +QSRGAIL C +PW++ LLL H+S IMSQESSLLALN++YQLIESR+ST  +A+ +SS LD L    LD
Subjt:  LYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLD

Query:  EEVNENDAIVPIIYEEDESDENES---GDEMETDEDGERDKVEAFDDLSAGEVDDDMSE
        EE +E     P+IYE+ +SDE+E     + METDE+ +    EA D ++  E  DDMS+
Subjt:  EEVNENDAIVPIIYEEDESDENES---GDEMETDEDGERDKVEAFDDLSAGEVDDDMSE

AT5G11240.1 transducin family protein / WD-40 repeat family protein

2.0e-38

25.24

Show/hide

Query:  ITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKD-------------SDGKNDVGYSCMACCFLGKKRKNSY--CVVAIGTNIGDVLAVNASNGERKW
        +T+F+P  DYLA+ + +G +KIW T  G +  E+ D               G   V Y+CM    L KK+K      V+ +GT  GDVLA++ ++G+ KW
Subjt:  ITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKD-------------SDGKNDVGYSCMACCFLGKKRKNSY--CVVAIGTNIGDVLAVNASNGERKW

Query:  VSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDD
          + CHPGGV  +S + K   +++ G++GM  ++D  +GN+I++FKAS +++SS   S D K L  A  +LK  +  D  ++       G ++ V+ ++D
Subjt:  VSAGCHPGGVIGLSFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDD

Query:  AKTIITSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLW-KLKILSKDEVSPTKVSVKANDNQSAEENHESA
         K +++S +G +++ VW  D  A K S   VL+++HPP   +    +N E  + +L++S  GV Y W    +      +PTKV++      +A+ + +  
Subjt:  AKTIITSELGAKHLQVWWCDMSAGKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLW-KLKILSKDEVSPTKVSVKANDNQSAEENHESA

Query:  KKNRVSVIASRIHSV-GENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQNDLSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGD---
        K +   + A+++  +         +  G +  P      + +     +N + +   L            I Q ++  SK+   +   + LD   A D   
Subjt:  KKNRVSVIASRIHSV-GENEVSVLVTHGSMDLPQHSLFNIGYSVKEDVNTAHENKTLQQNDLSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGD---

Query:  ----VSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSS
            V+D+ +   S  L + D +   + +  A     D  E    E +  S+ ++  + +   +     +   D    L        K +  ++  +  S
Subjt:  ----VSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSS

Query:  DVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDE
           K L +L +  Q+R       LPW+  +++ H+  IMSQE  +   LN+L ++ +SR +  Q  L LS  L  L T  +++       I     E DE
Subjt:  DVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDE

Query:  SDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE
        S++ E  +++E    GE D           + DD + E
Subjt:  SDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE

Sequences

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CDS sequence

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ATGGCAATGAAGAAGGAAATTCTTAAATCGCCCCCTATCACAGCTTTCACTCCCGACGGCGACTATCTCGCCATCTTGTCCTCAAATGGAACTCTTAAGATTTGGAGTAC
TGGTGATGGGAGTTTACTGGTAGAGTGGAAGGATTCCGATGGAAAAAATGATGTTGGTTATTCTTGTATGGCATGCTGTTTTCTGGGGAAAAAGCGTAAAAACAGTTATT
GTGTAGTTGCTATTGGTACCAATATTGGGGATGTGTTGGCTGTGAATGCTTCAAACGGTGAGAGGAAGTGGGTCTCTGCAGGTTGCCATCCTGGTGGAGTTATTGGCCTT
TCTTTTGCGAACAAAGGCCGCAGACTGCATACAGTTGGAAGTAATGGAATGGCCTCTGAGATGGATACCGAAACAGGAAACATTATCAAGGAGTTCAAAGCTTCGAAAGA
ATCAATATCTTCTTCATTCTTTTCACTTGATGCGAAGTACTTAGCTGTAGCTGGTAAAAAGTTGAAGATTTTAAGCACAGATGATGGGGATGAGCTTATGGTGCACCCTG
ATCAATTGGGTCCTATGAAGCTTGTTTCTCTGTCTGATGATGCTAAAACAATAATTACATCAGAACTTGGAGCCAAACATCTTCAAGTGTGGTGGTGTGATATGAGTGCC
GGAAAATTTAGTAGAGGTCCTGTTCTATCCATGAAGCATCCTCCATTTGTCTCTGAATGCAGAAATATTAGCAATCAAGAAGACAGCGTAGTTATCTTGTCAGTATCAGT
ATCAGGTGTAGCTTATTTATGGAAATTAAAGATACTATCTAAAGATGAGGTTAGTCCAACTAAAGTCTCTGTAAAAGCTAATGACAACCAATCAGCTGAGGAAAACCATG
AAAGTGCTAAGAAGAATCGAGTTTCTGTGATTGCTTCCAGAATACATAGTGTAGGAGAAAATGAAGTGTCAGTTCTTGTTACTCATGGCTCCATGGACCTACCACAGCAT
AGTCTTTTTAATATTGGTTATTCTGTGAAGGAAGATGTAAATACTGCACATGAGAACAAAACACTCCAACAAAATGATCTTTCTGAACAAGGTCCCCATGAGATTGAACA
AGTGATTACGCCTAAAAGTAAGAAAAGCAAAAAGAAAAGAGCAGCATCTGATCTTGATAGTCTGACAGCTGGAGATGTCAGTGATGTTGGCAATGGAGATGCTTCTGATG
TTCTATTTAATGATGATTTAAATGAGCCATCCATGGGAGAGAAACTTGCGAGTTTGAATTTGGTGGACCAAAATGAGGATGAAGGTCGTGAACAAGAAGAACCTTCCGTC
CCTGTAATACCACCAAGTGCAGACTCTGTTCAGGTTTTGCTTAAGCAAGCGCTGCATGCAGACGATCGTGCCCTTCTGCTAGAATGCTTATATACCAAGGATGATAAGGT
TATTTCAAAATCAATAGCACAATTAAATTCATCGGATGTTCTCAAGCTTTTGCACTCTCTGATATCCTTTATCCAGTCAAGAGGTGCAATTCTTGTATGTGCCCTCCCTT
GGCTGAGAGGCTTACTTCTCCAACATGCTAGTAAAATTATGTCTCAAGAATCTTCTCTCCTCGCCTTGAACTCTCTATATCAGCTCATTGAGTCTAGAATTTCAACATTC
CAATCTGCTCTACTGCTATCAAGTAGCTTAGACTTCCTCTTCACGGGGGTTCTTGATGAGGAGGTAAATGAAAATGACGCCATTGTGCCGATTATTTACGAGGAGGACGA
GAGCGACGAAAATGAATCGGGTGATGAAATGGAAACTGATGAAGATGGTGAAAGGGATAAAGTAGAAGCCTTTGACGATCTTAGTGCTGGTGAGGTGGATGATGACATGA
GTGAATGA

mRNA sequence

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CTAAACCCCAAACCAGAACGCTAAAACCCTCAGCACACCAGGCTGCAGCTGCGAAGTGCCGTTCATCGCTCCCAACTTTTTCTTCTTTGCCCTTCCCAATTTGATTACCA
ATAAAGATTTATGGCAATGAAGAAGGAAATTCTTAAATCGCCCCCTATCACAGCTTTCACTCCCGACGGCGACTATCTCGCCATCTTGTCCTCAAATGGAACTCTTAAGA
TTTGGAGTACTGGTGATGGGAGTTTACTGGTAGAGTGGAAGGATTCCGATGGAAAAAATGATGTTGGTTATTCTTGTATGGCATGCTGTTTTCTGGGGAAAAAGCGTAAA
AACAGTTATTGTGTAGTTGCTATTGGTACCAATATTGGGGATGTGTTGGCTGTGAATGCTTCAAACGGTGAGAGGAAGTGGGTCTCTGCAGGTTGCCATCCTGGTGGAGT
TATTGGCCTTTCTTTTGCGAACAAAGGCCGCAGACTGCATACAGTTGGAAGTAATGGAATGGCCTCTGAGATGGATACCGAAACAGGAAACATTATCAAGGAGTTCAAAG
CTTCGAAAGAATCAATATCTTCTTCATTCTTTTCACTTGATGCGAAGTACTTAGCTGTAGCTGGTAAAAAGTTGAAGATTTTAAGCACAGATGATGGGGATGAGCTTATG
GTGCACCCTGATCAATTGGGTCCTATGAAGCTTGTTTCTCTGTCTGATGATGCTAAAACAATAATTACATCAGAACTTGGAGCCAAACATCTTCAAGTGTGGTGGTGTGA
TATGAGTGCCGGAAAATTTAGTAGAGGTCCTGTTCTATCCATGAAGCATCCTCCATTTGTCTCTGAATGCAGAAATATTAGCAATCAAGAAGACAGCGTAGTTATCTTGT
CAGTATCAGTATCAGGTGTAGCTTATTTATGGAAATTAAAGATACTATCTAAAGATGAGGTTAGTCCAACTAAAGTCTCTGTAAAAGCTAATGACAACCAATCAGCTGAG
GAAAACCATGAAAGTGCTAAGAAGAATCGAGTTTCTGTGATTGCTTCCAGAATACATAGTGTAGGAGAAAATGAAGTGTCAGTTCTTGTTACTCATGGCTCCATGGACCT
ACCACAGCATAGTCTTTTTAATATTGGTTATTCTGTGAAGGAAGATGTAAATACTGCACATGAGAACAAAACACTCCAACAAAATGATCTTTCTGAACAAGGTCCCCATG
AGATTGAACAAGTGATTACGCCTAAAAGTAAGAAAAGCAAAAAGAAAAGAGCAGCATCTGATCTTGATAGTCTGACAGCTGGAGATGTCAGTGATGTTGGCAATGGAGAT
GCTTCTGATGTTCTATTTAATGATGATTTAAATGAGCCATCCATGGGAGAGAAACTTGCGAGTTTGAATTTGGTGGACCAAAATGAGGATGAAGGTCGTGAACAAGAAGA
ACCTTCCGTCCCTGTAATACCACCAAGTGCAGACTCTGTTCAGGTTTTGCTTAAGCAAGCGCTGCATGCAGACGATCGTGCCCTTCTGCTAGAATGCTTATATACCAAGG
ATGATAAGGTTATTTCAAAATCAATAGCACAATTAAATTCATCGGATGTTCTCAAGCTTTTGCACTCTCTGATATCCTTTATCCAGTCAAGAGGTGCAATTCTTGTATGT
GCCCTCCCTTGGCTGAGAGGCTTACTTCTCCAACATGCTAGTAAAATTATGTCTCAAGAATCTTCTCTCCTCGCCTTGAACTCTCTATATCAGCTCATTGAGTCTAGAAT
TTCAACATTCCAATCTGCTCTACTGCTATCAAGTAGCTTAGACTTCCTCTTCACGGGGGTTCTTGATGAGGAGGTAAATGAAAATGACGCCATTGTGCCGATTATTTACG
AGGAGGACGAGAGCGACGAAAATGAATCGGGTGATGAAATGGAAACTGATGAAGATGGTGAAAGGGATAAAGTAGAAGCCTTTGACGATCTTAGTGCTGGTGAGGTGGAT
GATGACATGAGTGAATGATTATGAAGCTACAAAAAAAATCCTGTGTGGGATTTTTATTTTTTGACCTTCCTTTTTCCAAAATGAGCTCTTATTCTGTAATTTTGACATAT
GATTAATCCTCCTAATGAATGAGAATTATCTAAACCCATTGCCCCAAGTTGCAAACTTGTTATGTGGTCCCATTCTTCCCAACTTAAGAAAGAAAATTTTCATCTTGAAT
ATATAATATTTGAAGGCAAAATCTTTATACGGCAGAAAACCATCCATTCAATTCAGATGAGATGCCC

Protein sequence

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MAMKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTGDGSLLVEWKDSDGKNDVGYSCMACCFLGKKRKNSYCVVAIGTNIGDVLAVNASNGERKWVSAGCHPGGVIGL
SFANKGRRLHTVGSNGMASEMDTETGNIIKEFKASKESISSSFFSLDAKYLAVAGKKLKILSTDDGDELMVHPDQLGPMKLVSLSDDAKTIITSELGAKHLQVWWCDMSA
GKFSRGPVLSMKHPPFVSECRNISNQEDSVVILSVSVSGVAYLWKLKILSKDEVSPTKVSVKANDNQSAEENHESAKKNRVSVIASRIHSVGENEVSVLVTHGSMDLPQH
SLFNIGYSVKEDVNTAHENKTLQQNDLSEQGPHEIEQVITPKSKKSKKKRAASDLDSLTAGDVSDVGNGDASDVLFNDDLNEPSMGEKLASLNLVDQNEDEGREQEEPSV
PVIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLYQLIESRISTF
QSALLLSSSLDFLFTGVLDEEVNENDAIVPIIYEEDESDENESGDEMETDEDGERDKVEAFDDLSAGEVDDDMSE

Lsi02G027320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome