; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G027350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description39S ribosomal protein L41-A, mitochondrial-like
Genome locationchr02:33636670..33639528
RNA-Seq ExpressionLsi02G027350
SyntenyLsi02G027350
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135839.1 39S ribosomal protein L41-A, mitochondrial [Cucumis sativus]1.4e-4190.82Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDL+DFK     LKPYVSQCPIE+KTSDNNESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS

XP_008461075.1 PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Cucumis melo]2.7e-4088.78Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDL+DFK     LKPYVSQCPIE+ TSDN ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS

XP_022143129.1 39S ribosomal protein L41-A, mitochondrial [Momordica charantia]6.0e-4087.76Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNY+VPDLTDFK     LKPYVSQCP E+KTS+ +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS

XP_022982189.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima]1.5e-3886.73Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK     LKPYVSQCPIE KTS+  ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]1.3e-4292.86Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK     LKPYVSQCPIE+KTSDNNESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS

TrEMBL top hitse value%identityAlignment
A0A0A0KBX4 Uncharacterized protein6.9e-4290.82Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDL+DFK     LKPYVSQCPIE+KTSDNNESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS

A0A1S3CEC5 39S ribosomal protein L41-A, mitochondrial-like1.3e-4088.78Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS
        MALGLILGLGR MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDL+DFK     LKPYVSQCPIE+ TSDN ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS

A0A2C9U139 Uncharacterized protein9.3e-3984.54Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAK
        M LGLILG+GRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK     LKPYVSQCP E+KT++++E+AK
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAK

A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial2.9e-4087.76Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS
        MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNY+VPDLTDFK     LKPYVSQCP E+KTS+ +ESAKS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS

A0A6J1J3V5 39S ribosomal protein L41-A, mitochondrial-like7.1e-3986.73Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK     LKPYVSQCPIE KTS+  ES KS
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial2.6e-0645.45Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS-QCPIEIKT
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FK     LKPYV+ + P  I T
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS-QCPIEIKT

Q6DJI4 39S ribosomal protein L41-A, mitochondrial9.0e-0741.77Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS
        +GLI  + R + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FK     LKPYVS
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS

Q6INF3 39S ribosomal protein L41-B, mitochondrial1.5e-0641.77Show/hide
Query:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS
        +GLI  + R + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FK     LKPYVS
Subjt:  LGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS

Q8IXM3 39S ribosomal protein L41, mitochondrial4.9e-0547.46Show/hide
Query:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS
        +SKR PR +   KG+  K  GF T    +V + E +P +VVPDLT FK     LKPYVS
Subjt:  SSKRAPRDY--YKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS

Q9CQN7 39S ribosomal protein L41, mitochondrial2.6e-0643.94Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS-QCPIEIKT
        +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FK     LKPYV+ + P  I T
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVS-QCPIEIKT

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L279.8e-3369.39Show/hide
Query:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEI-KTSDNNESAK
        M LGL+ G+GR  RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYV+ P+KLPNYVVPDLT FK     LKPYVSQCP+++ KT+++ E++K
Subjt:  MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEI-KTSDNNESAK

AT5G39800.1 Mitochondrial ribosomal protein L273.3e-3672.34Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAK
        GL++G+GR+ RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYV+ P+KLPNYVVPDLT FK     LKPYVSQCPI++ T+++ E++K
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAK

AT5G40080.1 Mitochondrial ribosomal protein L277.3e-3671.28Show/hide
Query:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAK
        GL++G+GR+ RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYV+ P+KLPNYVVPDLT FK     LKPYVSQCP+++ T+++ E++K
Subjt:  GLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTAGGACTAATATTGGGACTTGGAAGAGCAATGCGGAGGAAGCGTACATCTTCTCTGGACATTCTTTCATCTAAACGAGCTCCACGAGATTACTATAAGGGCAA
GAATTGCAAGCCTACTGGTTTTCATACGCGTAAAGGTGGATATGTATTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGGTATTTTTAC
TAGTTCTCAAGCCTTATGTATCTCAATGTCCCATAGAAATTAAGACAAGTGACAACAACGAATCAGCTAAGTCATAA
mRNA sequenceShow/hide mRNA sequence
AAAGAAAAAAAATTAATAACCTTTGTTTTTCTTTTTCTTCTCCTCTAGCTCTGGCTCTGGCTCTCTCTCTCTCTGTCTTCCTGTCCTATTCCCACTGATACTAGCCGCTG
CCGCCATAGGTTCAACGATTCTGTAACCTATTCATCTCTTCCCTTCAGCGAGTTTAAATTCCACCGCCGTAGGATAACTCCGACGCCGCTTAAACCCCGCGAAGACGCAC
GGACCCGTCCGATAGATAACCTAGCAGAAGAAGTTTCAGAAAGCGTTCTGGTACTGTTCTTTTGTTTGATCGAGGTGATTAACTTGGGAAATGGCGTTAGGACTAATATT
GGGACTTGGAAGAGCAATGCGGAGGAAGCGTACATCTTCTCTGGACATTCTTTCATCTAAACGAGCTCCACGAGATTACTATAAGGGCAAGAATTGCAAGCCTACTGGTT
TTCATACGCGTAAAGGTGGATATGTATTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGGTATTTTTACTAGTTCTCAAGCCTTATGTA
TCTCAATGTCCCATAGAAATTAAGACAAGTGACAACAACGAATCAGCTAAGTCATAAGGGAAGAGGTAAATATGAGCATGATGATGTTGGTGACGGCGTGGAGGGGACTT
GGAAGAAAAAGACCATTAGTTGCTTTTGTTGGATTCTTTTACTAGTTCAGGCTCTGGTTCATGAGTTGACAACTTCAAACAATCGACGAGAAAACAAAAACTTCCTTATT
TTCACAATATATGAAACACGTTTGGTTTCAATTTAGAAACTTTAAAGTTGAATTCATAATTTGAAAGCTGACTTTGAAAATGCTGGAAAAATATAATGTGTTTGGTAAGA
TACATTCTTTGAGAGAAAAAAAATTATTTTTTATTAACAATCATGCTTAATACATACTTCAAATATGTATATAGTCAATATTGTACAGTTAAATGAAGCTCAG
Protein sequenceShow/hide protein sequence
MALGLILGLGRAMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLVPEKLPNYVVPDLTDFKVFLLVLKPYVSQCPIEIKTSDNNESAKS