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Lsi02G027680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:33942056..33943440
RNA-Seq ExpressionLsi02G027680
SyntenyLsi02G027680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058807.1 hypothetical protein E6C27_scaffold339G002820 [Cucumis melo var. makuwa]1.6e-0768.63Show/hide
Query:  RRGHASMQASRRAVEEGDTGRDGACDEAGMVAIEKIVGIGHGERAEQQPTH
        RR  AS+QAS+RAV EGD GRDGA DEAG VA  K  GIG GER +QQP+H
Subjt:  RRGHASMQASRRAVEEGDTGRDGACDEAGMVAIEKIVGIGHGERAEQQPTH
TrEMBL top hitse value%identityAlignment
A0A0A0K910 Uncharacterized protein6.5e-1058.44Show/hide
Query:  SCTAKLAEEVILLWRLIMEPGVV--MRRGHASMQASRRAVEEGDTGRDGACDEAGMVAIEKIVGIGHGERAEQQPTH
        SCTAKLAEE+ILL   + + G+V   RR  AS+QAS+ AV EG+ G DGA DEAG VA  K  GI  GER +QQP+H
Subjt:  SCTAKLAEEVILLWRLIMEPGVV--MRRGHASMQASRRAVEEGDTGRDGACDEAGMVAIEKIVGIGHGERAEQQPTH
A0A5A7UVT9 Uncharacterized protein7.9e-0868.63Show/hide
Query:  RRGHASMQASRRAVEEGDTGRDGACDEAGMVAIEKIVGIGHGERAEQQPTH
        RR  AS+QAS+RAV EGD GRDGA DEAG VA  K  GIG GER +QQP+H
Subjt:  RRGHASMQASRRAVEEGDTGRDGACDEAGMVAIEKIVGIGHGERAEQQPTH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACATTGGTGTTGTTCATAGAAGTAGACGGGTTCAAGCAAGAATGCAGGCATCTCGACGGGCAGTCGGAGAAGGAGATCCCAGGCGTGACGGTGCATACGACGA
AGCAGGAGCTGTAACAATCTTGAAAAGTTGCACAGCCAAGCTTGCAGAAGAAGTGATTTTGTTGTGGCGACTGATCATGGAGCCTGGCGTTGTAATGAGACGGGGACATG
CAAGTATGCAGGCATCTCGACGGGCAGTCGAAGAAGGAGACACCGGGCGTGATGGCGCATGTGATGAAGCAGGAATGGTAGCAATCGAAAAAATCGTAGGAATTGGCCAT
GGAGAGCGAGCAGAGCAGCAGCCAACCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGACATTGGTGTTGTTCATAGAAGTAGACGGGTTCAAGCAAGAATGCAGGCATCTCGACGGGCAGTCGGAGAAGGAGATCCCAGGCGTGACGGTGCATACGACGA
AGCAGGAGCTGTAACAATCTTGAAAAGTTGCACAGCCAAGCTTGCAGAAGAAGTGATTTTGTTGTGGCGACTGATCATGGAGCCTGGCGTTGTAATGAGACGGGGACATG
CAAGTATGCAGGCATCTCGACGGGCAGTCGAAGAAGGAGACACCGGGCGTGATGGCGCATGTGATGAAGCAGGAATGGTAGCAATCGAAAAAATCGTAGGAATTGGCCAT
GGAGAGCGAGCAGAGCAGCAGCCAACCCATTAA
Protein sequenceShow/hide protein sequence
MDDIGVVHRSRRVQARMQASRRAVGEGDPRRDGAYDEAGAVTILKSCTAKLAEEVILLWRLIMEPGVVMRRGHASMQASRRAVEEGDTGRDGACDEAGMVAIEKIVGIGH
GERAEQQPTH