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Lsi02G027690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionthionin-like protein 2
Genome locationchr02:33943234..33944117
RNA-Seq ExpressionLsi02G027690
SyntenyLsi02G027690
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461039.1 PREDICTED: thionin-like protein 2 [Cucumis melo]5.4e-3260.91Show/hide
Query:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVH-QPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGS
        KWALMA L+L+SLS  NS  FQ+CY++CFV+C +TPG++FSDCP RCL +C+ PS  +++ +VVH Q QQN  FCKLGCA  SCTKFSTK+ P E++V  
Subjt:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVH-QPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGS

Query:  CVESCSLACS
        CV+SCS  CS
Subjt:  CVESCSLACS

XP_011659556.1 thionin-like protein 2 [Cucumis sativus]9.8e-3461.61Show/hide
Query:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVH-QPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGS
        KWALMA L+L+SLS  NS  FQ+CY++CFV+C +TPG++FSDCP RCL +C+ PS  +++ +VVH Q QQN  FCKLGCA  SCTKFSTK+ P E++VG 
Subjt:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVH-QPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGS

Query:  CVESCSLACSRN
        CV+SCS  CS N
Subjt:  CVESCSLACSRN

XP_022953260.1 thionin-like protein 2 [Cucurbita moschata]2.3e-3058.93Show/hide
Query:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNT---NVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEV
        K  LMA LVLSSL+  NS  FQ+CY++CFV+C +TPG++FSDCP RCL +C+ PS  ++N    + VH+ Q+N+ FC+LGCA  SCTKFST + PAEK+V
Subjt:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNT---NVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEV

Query:  GSCVESCSLACS
        GSCV+SCS  CS
Subjt:  GSCVESCSLACS

XP_023547567.1 thionin-like protein 2 [Cucurbita pepo subsp. pepo]1.7e-3059.46Show/hide
Query:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNN--TNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVG
        K  LMA LVLSSL+  NS  FQ+CY++CFV+C +TPG++FSDCP RCL +C+ PS  ++N   + VH+ Q+N+ FC+LGCAT SCTKFST + PAE +VG
Subjt:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNN--TNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVG

Query:  SCVESCSLACS
        SCV+SCS  CS
Subjt:  SCVESCSLACS

XP_038899383.1 thionin-like protein 2 [Benincasa hispida]4.4e-3464.22Show/hide
Query:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGSC
        KWAL+A L+LSSLS  NS  FQ+CY++CFV+C +TPG++FSDCP RCL +C+ PS  ++N N VH+ +QN+ FCKLGCA  SCTKFSTK+ PAEKEVG+C
Subjt:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGSC

Query:  VESCSLACS
        V+SCS  CS
Subjt:  VESCSLACS

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein4.7e-3461.61Show/hide
Query:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVH-QPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGS
        KWALMA L+L+SLS  NS  FQ+CY++CFV+C +TPG++FSDCP RCL +C+ PS  +++ +VVH Q QQN  FCKLGCA  SCTKFSTK+ P E++VG 
Subjt:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVH-QPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGS

Query:  CVESCSLACSRN
        CV+SCS  CS N
Subjt:  CVESCSLACSRN

A0A1S3CDU4 thionin-like protein 22.6e-3260.91Show/hide
Query:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVH-QPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGS
        KWALMA L+L+SLS  NS  FQ+CY++CFV+C +TPG++FSDCP RCL +C+ PS  +++ +VVH Q QQN  FCKLGCA  SCTKFSTK+ P E++V  
Subjt:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVH-QPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGS

Query:  CVESCSLACS
        CV+SCS  CS
Subjt:  CVESCSLACS

A0A6J1CW29 thionin-like protein 21.2e-2147.46Show/hide
Query:  KWAL---MACLVLSSLSMTNSE--PFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNN----TNVVHQPQQNRLFCKLGCATFSCTKFSTKEY
        KW L   M  LV+ S  MT +E   FQ+CY++CFV+C +TPG SFS+CP +CL +C+ PS  +++         +   N  FCKLGCA   CT F+T   
Subjt:  KWAL---MACLVLSSLSMTNSE--PFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNN----TNVVHQPQQNRLFCKLGCATFSCTKFSTKEY

Query:  PAEKEVGSCVESCSLACS
        PAEK+VG CV+SCS  CS
Subjt:  PAEKEVGSCVESCSLACS

A0A6J1GMH5 thionin-like protein 21.1e-3058.93Show/hide
Query:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNT---NVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEV
        K  LMA LVLSSL+  NS  FQ+CY++CFV+C +TPG++FSDCP RCL +C+ PS  ++N    + VH+ Q+N+ FC+LGCA  SCTKFST + PAEK+V
Subjt:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNT---NVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEV

Query:  GSCVESCSLACS
        GSCV+SCS  CS
Subjt:  GSCVESCSLACS

A0A6J1JZ84 thionin-like protein 21.4e-3058.56Show/hide
Query:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNN--TNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVG
        K  LMA LVLSSL+  NS  FQ+CY++CF++C +TPG++FSDCP RCL +C+ PS  ++N   + VH+ Q+N+ FC+LGCA  SCTKFST++ PAEK+VG
Subjt:  KWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNN--TNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVG

Query:  SCVESCSLACS
        SCV+SCS  CS
Subjt:  SCVESCSLACS

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 21.2e-1033.62Show/hide
Query:  ALMACLVLSSL---SMTNSEPFQDCYSSCFVVCTVTPGI-SFSDCPSRCLHSCLN----PSTSMNNTNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAE
        A+M  +V+ +L   +     PF++CY +C V C        +  CP  C   CL     PS S NN +      ++  FCKLGCAT+ C   S+ + P  
Subjt:  ALMACLVLSSL---SMTNSEPFQDCYSSCFVVCTVTPGI-SFSDCPSRCLHSCLN----PSTSMNNTNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAE

Query:  KEVGSCVESCSLACSR
        + V +CV+SCS  C++
Subjt:  KEVGSCVESCSLACSR

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.8.6e-1233.62Show/hide
Query:  ALMACLVLSSL---SMTNSEPFQDCYSSCFVVCTVTPGI-SFSDCPSRCLHSCLN----PSTSMNNTNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAE
        A+M  +V+ +L   +     PF++CY +C V C        +  CP  C   CL     PS S NN +      ++  FCKLGCAT+ C   S+ + P  
Subjt:  ALMACLVLSSL---SMTNSEPFQDCYSSCFVVCTVTPGI-SFSDCPSRCLHSCLN----PSTSMNNTNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAE

Query:  KEVGSCVESCSLACSR
        + V +CV+SCS  C++
Subjt:  KEVGSCVESCSLACSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATAATGAAATGGGCTTTAATGGCTTGTTTGGTGCTGAGCTCGCTCTCCATGACCAATTCCGAACCTTTTCAAGATTGTTACAGCTCCTGCTTCGTCGTATGCAC
CGTCACGCCTGGGATCTCCTTCTCCGACTGCCCGTCGAGATGCCTGCATTCTTGCTTGAACCCGTCTACTTCTATGAACAACACCAATGTCGTCCATCAGCCACAACAAA
ATCGATTGTTCTGCAAGCTCGGTTGCGCAACTTTCTCGTGTACCAAGTTTAGCACAAAGGAATATCCAGCTGAGAAAGAAGTGGGGAGCTGTGTGGAATCTTGCTCTCTA
GCATGTTCCAGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATAATGAAATGGGCTTTAATGGCTTGTTTGGTGCTGAGCTCGCTCTCCATGACCAATTCCGAACCTTTTCAAGATTGTTACAGCTCCTGCTTCGTCGTATGCAC
CGTCACGCCTGGGATCTCCTTCTCCGACTGCCCGTCGAGATGCCTGCATTCTTGCTTGAACCCGTCTACTTCTATGAACAACACCAATGTCGTCCATCAGCCACAACAAA
ATCGATTGTTCTGCAAGCTCGGTTGCGCAACTTTCTCGTGTACCAAGTTTAGCACAAAGGAATATCCAGCTGAGAAAGAAGTGGGGAGCTGTGTGGAATCTTGCTCTCTA
GCATGTTCCAGGAATTGATGATCTGCATCTGCTAAATGAAGCCAATGAACTATATATTTTTTTTTGTT
Protein sequenceShow/hide protein sequence
MAIMKWALMACLVLSSLSMTNSEPFQDCYSSCFVVCTVTPGISFSDCPSRCLHSCLNPSTSMNNTNVVHQPQQNRLFCKLGCATFSCTKFSTKEYPAEKEVGSCVESCSL
ACSRN