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Lsi02G027730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionthionin-like protein 2
Genome locationchr02:33975572..33980729
RNA-Seq ExpressionLsi02G027730
SyntenyLsi02G027730
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.2e-4085.87Show/hide
Query:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK
        M+SIV+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF AS+P DL+H+DTHYFCKLGCATSLCTKFSTK DP +K
Subjt:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK

KAG7014098.1 Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-3779.35Show/hide
Query:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK
        M+S+V+ICFILSL+AGRSTASF KCYAKCF+ CAITPGI +GTCGA CLA CLFIAS+PMD +HM+THYFCKLGCATS+CTKFSTK DP +K
Subjt:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-4085.87Show/hide
Query:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK
        M+SIV+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF AS+P DL+H+DTHYFCKLGCATSLCTKFSTK DP +K
Subjt:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]7.6e-4184.78Show/hide
Query:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK
        M+S+V+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF+AS+P DL+H+DTHYFCKLGCATSLCTKFSTK DP +K
Subjt:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]3.1e-4280Show/hide
Query:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQ
        M+S++LICFI+SLV GRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCL DCLFIASSP+D +H+DTHYFCKLGCATSLCTKFSTKKDP +K    + S 
Subjt:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQ

Query:  VSACG
        V++CG
Subjt:  VSACG

TrEMBL top hitse value%identityAlignment
A0A0A0KC18 Uncharacterized protein2.5e-4585.44Show/hide
Query:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQ
        M+S+VLICFILSLVAGRSTASFGKCYAKCF+VCAITPGIP+GTCGAKCLADCLFIASSPMDL++MDTHYFCKLGCATS CTKFSTKKDPG+K+SN  V+ 
Subjt:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQ

Query:  VSA
         S+
Subjt:  VSA

A0A5D3BCH5 Thionin-like protein 24.5e-2357.8Show/hide
Query:  MRSIVLICFILSLVAGRST--ASFGKCYAKCFVVCAITPGIP-IGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNIL
        MRSIVLI FILSLVAGRST      K + KC   CAI P IP +  C  KC+ADC+ +ASSPMDL+ MDTHYFCKLGC T  CTK STKKD       ++
Subjt:  MRSIVLICFILSLVAGRST--ASFGKCYAKCFVVCAITPGIP-IGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNIL

Query:  VSQVSACGS
         ++V  CG+
Subjt:  VSQVSACGS

A0A6J1DDL8 thionin-like protein 21.2e-3175.82Show/hide
Query:  IVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLF-IASSPMDL-DHMDTHYFCKLGCATSLCTKFSTKKDPGQK
        ++L+  +LSLVAG+STASFGKCYAKCFVVCAITPGIP+GTC AKCL DCLF  AS+  D  D +DT YFCKLGCATSLCTKFSTKKDP +K
Subjt:  IVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLF-IASSPMDL-DHMDTHYFCKLGCATSLCTKFSTKKDPGQK

A0A6J1KDK0 thionin-like protein 23.7e-4184.78Show/hide
Query:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK
        M+S+V+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF+AS+P DL+H+DTHYFCKLGCATSLCTKFSTK DP +K
Subjt:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQK

F6HX25 Uncharacterized protein6.1e-2046.67Show/hide
Query:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDP-GQKISNILVS
        +R++V++  ++ ++ G+STASF  CY KCF+ C ITP     +C  +CL DC+ I S P+D++  DT YFCKLGCA+SLCT  STKK+P G+K+ + + S
Subjt:  MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDP-GQKISNILVS

Query:  QVSAC
          + C
Subjt:  QVSAC

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 22.0e-0432.41Show/hide
Query:  VLICFILSLVAGRSTAS---FGKCYAKCFVVCAITPGIP-IGTCGAKCLADCLFIASSPM----DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNI
        V+I  ++  +  ++ A    F +CY  C V C      P    C   C  +CL   S P     ++D  D  YFCKLGCAT  C   S+ ++P       
Subjt:  VLICFILSLVAGRSTAS---FGKCYAKCFVVCAITPGIP-IGTCGAKCLADCLFIASSPM----DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNI

Query:  LVSQVSAC
         V +VSAC
Subjt:  LVSQVSAC

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.1.4e-0532.41Show/hide
Query:  VLICFILSLVAGRSTAS---FGKCYAKCFVVCAITPGIP-IGTCGAKCLADCLFIASSPM----DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNI
        V+I  ++  +  ++ A    F +CY  C V C      P    C   C  +CL   S P     ++D  D  YFCKLGCAT  C   S+ ++P       
Subjt:  VLICFILSLVAGRSTAS---FGKCYAKCFVVCAITPGIP-IGTCGAKCLADCLFIASSPM----DLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNI

Query:  LVSQVSAC
         V +VSAC
Subjt:  LVSQVSAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACC
AGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTG
GTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTATCTCAAGTTTCTGCATGTGGTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACC
AGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTG
GTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTATCTCAAGTTTCTGCATGTGGTAGTTAA
Protein sequenceShow/hide protein sequence
MRSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGQKISNILVSQVSACGS