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Lsi02G027740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027740
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionthionin-like protein 2
Genome locationchr02:33984247..33989555
RNA-Seq ExpressionLsi02G027740
SyntenyLsi02G027740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]7.1e-0658.33Show/hide
Query:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID
        C+   S+  DL+H+DT++FCKLGCATSLCTKFSTK DP      SC++
Subjt:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-0658.33Show/hide
Query:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID
        C+   S+  DL+H+DT++FCKLGCATSLCTKFSTK DP      SC++
Subjt:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID

XP_004152967.1 thionin-like protein 2 [Cucumis sativus]5.4e-0641.98Show/hide
Query:  LSIISGRWPALLEDPQPHLGTAIPTALMSVLKPYHRFSFTLCFSCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKED
        LS+++G+  A++E  + +L      A+ S L      +      CI   SS M+L+ VDT +FCKLGCATS CTK STK+D
Subjt:  LSIISGRWPALLEDPQPHLGTAIPTALMSVLKPYHRFSFTLCFSCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKED

XP_038897055.1 thionin-like protein 2 [Benincasa hispida]4.9e-0760.42Show/hide
Query:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID
        C  NP STMD +H+DT++FCKLGCATS+CT FST  DP      SC+D
Subjt:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]3.2e-0658.33Show/hide
Query:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID
        C+   SS +D +H+DT++FCKLGCATSLCTKFSTK+DP      SC++
Subjt:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID

TrEMBL top hitse value%identityAlignment
A0A0A0KC18 Uncharacterized protein7.6e-0668.42Show/hide
Query:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDP
        C+   SS MDL+++DT++FCKLGCATS CTKFSTK+DP
Subjt:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDP

A0A5D3BCH5 Thionin-like protein 28.4e-0536.14Show/hide
Query:  LSIISGRWPALLEDPQPHLGTAIPTALMSVLKPYHRFSFTLCFSCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV
        LS+++GR   +L+  +  +      A++ ++      +      CI   SS MDL+ +DT++FCKLGC T  CTK STK+D V
Subjt:  LSIISGRWPALLEDPQPHLGTAIPTALMSVLKPYHRFSFTLCFSCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV

A0A6J1DDL8 thionin-like protein 24.9e-0552.54Show/hide
Query:  TLCFSCITN-----PSSTMDL-DHVDTNHFCKLGCATSLCTKFSTKEDPVSTAT-SCID
        T    C+T+      S+T D  D +DT +FCKLGCATSLCTKFSTK+DP      SC+D
Subjt:  TLCFSCITN-----PSSTMDL-DHVDTNHFCKLGCATSLCTKFSTKEDPVSTAT-SCID

A0A6J1KDK0 thionin-like protein 24.5e-0658.33Show/hide
Query:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID
        C+   S+  DL+H+DT++FCKLGCATSLCTKFSTK DP      SC++
Subjt:  CITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPV-STATSCID

A0A6P3Z3A7 thionin-like protein 26.4e-0551.02Show/hide
Query:  SCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPVS-TATSCID
        +CI  PSST+ L   ++N+FCKLGCA+SLC+ +STK++P S     C+D
Subjt:  SCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPVS-TATSCID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAGCCGTGGGTCATCGTCGGCCGTTCGTTTTCCGATAGTGGCGTCGTGAATACTGTTTCAGCGGCGGGGTTGCAGCAGCGTGGACGAAGCGTTGCCGTTTGGAT
CTCCGATTTGCAGGGTGGTTTCAGAGGCTATAGTTGGCGCGTGGATCTCTCCATAATCAGTGGTCGTTGGCCGGCGTTGCTGGAAGATCCACAGCCTCATTTGGGGACTG
CTATTCCAACTGCTTTAATGAGTGTGTTAAAACCATACCACCGGTTCTCTTTCACGCTTTGCTTCTCTTGCATCACCAATCCATCTTCCACTATGGATTTGGACCATGTG
GACACTAATCACTTCTGCAAACTTGGTTGTGCCACTTCTCTATGCACCAAATTCAGCACCAAGGAAGATCCTGTTTCAACTGCAACCTCTTGCATCGATGGAAAGCCACT
TTTCTCACTCTTGGAAACAATGGAAGACCCTGAAGTACCAAAGAGGGCCGAGCTACCATTATTAGAGAGACCAAAACTAGTAGTTAGGCCAACCCCATCCTTGGGTATAT
TACCAAACGAGAACGTAGATGTCGAAAATCCAGTACCGGCAAGACCTGTGAAGGCATTCTGGCTGCTTGATAATTGTTGGAACGAGTTCAAAGGAGCAGCCTCCTTACTA
GGATCCTCATTTTCATTCTTATCACCTCTCGCAGGATCCTCATTCTCATTCTTACCAACACTTACACATTCATCATTCTCAGCTTCCTTCTCAGCGACTCTTACAAGTTC
CTCATTGCCAGTCTTATCTCCTCCCGCTGCACTTCCACTATTTTCAGTTGGAGGTACCAAGCGTATTCCAGCAAAAGGATTTGAAGATGGGGCAGAGGCAGTTGGACCAC
GACGTACTTTGACAATTCTTCTCGTGGCTAGCACCTCTTCACTAGCCCGCTTGAAAGTTCCAGTCTCCTGCTCAGAAACATCTTCTTCATCATCAAGCCCAGGGTTATCT
CGTGATAGCTCCCTTCCAGCAGCCCTCTTTTTTCATCCCCCATTGAAGAGTCGAGCAAATCAACAAGAGCTTGGAGTTCCGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCAGCCGTGGGTCATCGTCGGCCGTTCGTTTTCCGATAGTGGCGTCGTGAATACTGTTTCAGCGGCGGGGTTGCAGCAGCGTGGACGAAGCGTTGCCGTTTGGAT
CTCCGATTTGCAGGGTGGTTTCAGAGGCTATAGTTGGCGCGTGGATCTCTCCATAATCAGTGGTCGTTGGCCGGCGTTGCTGGAAGATCCACAGCCTCATTTGGGGACTG
CTATTCCAACTGCTTTAATGAGTGTGTTAAAACCATACCACCGGTTCTCTTTCACGCTTTGCTTCTCTTGCATCACCAATCCATCTTCCACTATGGATTTGGACCATGTG
GACACTAATCACTTCTGCAAACTTGGTTGTGCCACTTCTCTATGCACCAAATTCAGCACCAAGGAAGATCCTGTTTCAACTGCAACCTCTTGCATCGATGGAAAGCCACT
TTTCTCACTCTTGGAAACAATGGAAGACCCTGAAGTACCAAAGAGGGCCGAGCTACCATTATTAGAGAGACCAAAACTAGTAGTTAGGCCAACCCCATCCTTGGGTATAT
TACCAAACGAGAACGTAGATGTCGAAAATCCAGTACCGGCAAGACCTGTGAAGGCATTCTGGCTGCTTGATAATTGTTGGAACGAGTTCAAAGGAGCAGCCTCCTTACTA
GGATCCTCATTTTCATTCTTATCACCTCTCGCAGGATCCTCATTCTCATTCTTACCAACACTTACACATTCATCATTCTCAGCTTCCTTCTCAGCGACTCTTACAAGTTC
CTCATTGCCAGTCTTATCTCCTCCCGCTGCACTTCCACTATTTTCAGTTGGAGGTACCAAGCGTATTCCAGCAAAAGGATTTGAAGATGGGGCAGAGGCAGTTGGACCAC
GACGTACTTTGACAATTCTTCTCGTGGCTAGCACCTCTTCACTAGCCCGCTTGAAAGTTCCAGTCTCCTGCTCAGAAACATCTTCTTCATCATCAAGCCCAGGGTTATCT
CGTGATAGCTCCCTTCCAGCAGCCCTCTTTTTTCATCCCCCATTGAAGAGTCGAGCAAATCAACAAGAGCTTGGAGTTCCGCTATAA
Protein sequenceShow/hide protein sequence
MAQPWVIVGRSFSDSGVVNTVSAAGLQQRGRSVAVWISDLQGGFRGYSWRVDLSIISGRWPALLEDPQPHLGTAIPTALMSVLKPYHRFSFTLCFSCITNPSSTMDLDHV
DTNHFCKLGCATSLCTKFSTKEDPVSTATSCIDGKPLFSLLETMEDPEVPKRAELPLLERPKLVVRPTPSLGILPNENVDVENPVPARPVKAFWLLDNCWNEFKGAASLL
GSSFSFLSPLAGSSFSFLPTLTHSSFSASFSATLTSSSLPVLSPPAALPLFSVGGTKRIPAKGFEDGAEAVGPRRTLTILLVASTSSLARLKVPVSCSETSSSSSSPGLS
RDSSLPAALFFHPPLKSRANQQELGVPL