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Lsi02G027950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G027950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal protein L37
Genome locationchr02:34176022..34177544
RNA-Seq ExpressionLsi02G027950
SyntenyLsi02G027950
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001569 - Ribosomal protein L37e
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein
IPR018267 - Ribosomal protein L37e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141772.1 60S ribosomal protein L37-3 [Cucumis sativus]2.7e-45100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

XP_022953178.1 60S ribosomal protein L37-3-like [Cucurbita moschata]2.3e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKG+AASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

XP_022964011.1 60S ribosomal protein L37-3-like [Cucurbita moschata]1.0e-4497.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

XP_023000413.1 60S ribosomal protein L37-3-like [Cucurbita maxima]3.0e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKS+C+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

XP_038902074.1 60S ribosomal protein L37-3 [Benincasa hispida]2.3e-4497.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPR+KGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

TrEMBL top hitse value%identityAlignment
A0A0A0K941 Ribosomal protein L371.3e-45100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A1S3CGU0 Ribosomal protein L371.3e-45100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A5D3BYC5 Ribosomal protein L371.3e-45100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A6J1HHN6 Ribosomal protein L374.9e-4597.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A6J1JVQ3 Ribosomal protein L371.1e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPRNKG+AASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

SwissProt top hitse value%identityAlignment
Q43292 60S ribosomal protein L37-21.3e-4288.42Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PRNKG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

Q8LEM8 60S ribosomal protein L37-32.2e-4287.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PR+K +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

Q8LFH7 60S ribosomal protein L37-11.1e-4186.32Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+ FREGT+A PRNK AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

Q90YT1 60S ribosomal protein L379.6e-3067.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA RKRKYNWS KA RR TTGTGRMR+++ V RRF++GFREGT   PR    AAS+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

Q9VXX8 Probable 60S ribosomal protein L37-A1.3e-2968.48Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAA
        M KGT SFGKR NKTHTLC RCGR S+H+QKS CA C +PAA+ R YNWSVKA RRKTTGTGRM++L+ V RRF++GFREGT+A P+   A+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAA

Arabidopsis top hitse value%identityAlignment
AT1G15250.1 Zinc-binding ribosomal protein family protein7.8e-4386.32Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+ FREGT+A PRNK AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

AT1G52300.1 Zinc-binding ribosomal protein family protein9.2e-4488.42Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PRNKG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA

AT3G16080.1 Zinc-binding ribosomal protein family protein1.6e-4387.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLR+VPRRFK+GFREGTEA PR+K +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGGGTACGGGCAGTTTTGGTAAAAGGAGGAACAAGACCCATACTCTATGTGTGCGGTGTGGACGCCGTAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCATG
TGCTTTCCCTGCTGCTCGCAAGCGCAAATATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACAACCGGAACTGGAAGAATGAGGTACTTGCGCCATGTTCCGCGTAGAT
TCAAGAGCGGCTTCAGAGAGGGGACTGAAGCTGCACCCAGGAATAAAGGAGCTGCAGCATCAGCATAA
mRNA sequenceShow/hide mRNA sequence
CTAAACCGTACTTCCGGTCATATAAAAGGGCCATTTTCCTTGCTGCTCTCCCCCATAGCCAAACTGCAGATAGAATTTCTCCTCCCTAGGGTTTCTTCGTCCTGCATCAA
TGGGAAAGGGTACGGGCAGTTTTGGTAAAAGGAGGAACAAGACCCATACTCTATGTGTGCGGTGTGGACGCCGTAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCATGT
GCTTTCCCTGCTGCTCGCAAGCGCAAATATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACAACCGGAACTGGAAGAATGAGGTACTTGCGCCATGTTCCGCGTAGATT
CAAGAGCGGCTTCAGAGAGGGGACTGAAGCTGCACCCAGGAATAAAGGAGCTGCAGCATCAGCATAAGGTTTTGGAAGAAGTTTGACCCAACTATAGTTTTCAGAAATCC
ATGCTTGAAATGATAAATTTGCTTGCAGTTCTCACCATATCCCATTGCCATCAACCGATGTAACAATAATTTGATGATAGGTAGAAACACAGCCAGTGATCATGTTCATT
GCAGTGATCAACAATTCTCACAGTTTCTACCTGTCACCAAACTTACTTTTTTCTGTATTGAATTGAACATCTAACCACCCTTTTGGGGGTGTTTTAGGGTAGGTTTCAAT
AAAAGGCAGTTAAAGTTGGGAG
Protein sequenceShow/hide protein sequence
MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA