; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G028060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G028060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCytochrome c-type biogenesis protein
Genome locationchr02:34252092..34253019
RNA-Seq ExpressionLsi02G028060
SyntenyLsi02G028060
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0032991 - protein-containing complex (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005616 - CcmH/CycL/Ccl2/NrfF family
IPR038297 - CcmH/CycL/Ccl2/NrfF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149299.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus]3.0e-1582.46Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        ME+DE+A+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
XP_008452301.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo]6.7e-1582.46Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        ME DE+A+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
XP_022152937.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charantia]5.1e-1582.46Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        MES+++AVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
XP_022953979.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata]3.0e-1584.21Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        MESD +AVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
XP_038904619.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida]1.4e-1584.21Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        ME+DE+AVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
TrEMBL top hitse value%identityAlignment
A0A0A0L351 Cytochrome c-type biogenesis protein1.5e-1582.46Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        ME+DE+A+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
A0A1S4DZT6 Cytochrome c-type biogenesis protein3.3e-1582.46Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        ME DE+A+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
A0A6J1DHL6 Cytochrome c-type biogenesis protein2.5e-1582.46Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        MES+++AVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
A0A6J1GPV4 Cytochrome c-type biogenesis protein1.5e-1584.21Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        MESD +AVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
A0A6J1JTI4 Cytochrome c-type biogenesis protein1.5e-1584.21Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
        MESD +AVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRK+  + D++R
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLR
SwissProt top hitse value%identityAlignment
B8AFK5 Cytochrome c-type biogenesis CcmH-like mitochondrial protein2.9e-1380Show/hide
Query:  ENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV
        E  VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRK+
Subjt:  ENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV
Q6K7S7 Cytochrome c-type biogenesis CcmH-like mitochondrial protein2.9e-1380Show/hide
Query:  ENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV
        E  VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRK+
Subjt:  ENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV
Q9XI46 Cytochrome c-type biogenesis CcmH-like mitochondrial protein3.8e-1373.47Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV
        ME  +   KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR++
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV
Arabidopsis top hitse value%identityAlignment
AT1G15220.1 cytochrome c biogenesis protein family2.7e-1473.47Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV
        ME  +   KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR++
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV
AT1G15220.2 cytochrome c biogenesis protein family2.7e-1473.47Show/hide
Query:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV
        ME  +   KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR++
Subjt:  MESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGCAGTGCAGTCTGGTCACGCTCCATGGTGTCTAAAATGGAGAGTGATGAGAATGCTGTGAAAAAAACACAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCA
CAATGTTAGGTGCATCGAGTGTGGTAGTCAATCCATTGAAGATTCACAAGCAGATATCGCGATTCTCCTCAGAAAGGTACCATTTCTTTTAGATAAACTCCGAGGTAGAC
AAATTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGCAGTGCAGTCTGGTCACGCTCCATGGTGTCTAAAATGGAGAGTGATGAGAATGCTGTGAAAAAAACACAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCA
CAATGTTAGGTGCATCGAGTGTGGTAGTCAATCCATTGAAGATTCACAAGCAGATATCGCGATTCTCCTCAGAAAGGTACCATTTCTTTTAGATAAACTCCGAGGTAGAC
AAATTAACTAA
Protein sequenceShow/hide protein sequence
MGCSAVWSRSMVSKMESDENAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKVPFLLDKLRGRQIN