; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G028130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G028130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive protein
Genome locationchr02:34313487..34314063
RNA-Seq ExpressionLsi02G028130
SyntenyLsi02G028130
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059316.1 auxin-responsive protein IAA27-like [Cucumis melo var. makuwa]5.9e-1280.77Show/hide
Query:  RCWLVKMGNVGLWLKFGDRIGMVVVVTMVSLFQEARNEVAEETERGKNGYEE
        RCWLVKM NVGLWL FG  IGM+VV    S FQEARNEVAEETERGKNGYEE
Subjt:  RCWLVKMGNVGLWLKFGDRIGMVVVVTMVSLFQEARNEVAEETERGKNGYEE
KAG6593477.1 hypothetical protein SDJN03_12953, partial [Cucurbita argyrosperma subsp. sororia]7.8e-0457.63Show/hide
Query:  QRCWLVKMGNVGLWLKFGD--RIGMVVV---VTMVS-LFQEARNEVAEETERGKNGYEE
        QR WLVKMG++ L  +  D  RIG+ V+    TM + LF+EAR EVAEETE+GKNG EE
Subjt:  QRCWLVKMGNVGLWLKFGD--RIGMVVV---VTMVS-LFQEARNEVAEETERGKNGYEE
TrEMBL top hitse value%identityAlignment
A0A5A7UYN9 Auxin-responsive protein2.9e-1280.77Show/hide
Query:  RCWLVKMGNVGLWLKFGDRIGMVVVVTMVSLFQEARNEVAEETERGKNGYEE
        RCWLVKM NVGLWL FG  IGM+VV    S FQEARNEVAEETERGKNGYEE
Subjt:  RCWLVKMGNVGLWLKFGDRIGMVVVVTMVSLFQEARNEVAEETERGKNGYEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTGAATCCTATGGAGTCTGTTTGCACTTGCAGCTCTCTTCCCTCTCTTTCTACATTACTTTCTTCCCTACAAACACAACAAAATATCATTCAAATCACTTTCAT
TTCAGTACCTTATAATTTATGTATCGATGATAGGCTCGATAACGTCGATGCATCACAGAAACCGCTACAAGCAACAACAATGAATATGCACGAAAGGGACATCAAGAACA
GGAGACTTGAGACATGCTTTATTTTCTTGATAAGGCAGCAAGAGGAAGAGCATCTGCAGAGGTGTTGGTTGGTGAAGATGGGCAACGTCGGTCTGTGGCTGAAGTTCGGA
GACAGGATCGGGATGGTGGTTGTTGTGACGATGGTTTCGTTGTTTCAAGAAGCGAGAAACGAGGTAGCAGAGGAGACGGAGAGAGGAAAGAATGGCTATGAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTGAATCCTATGGAGTCTGTTTGCACTTGCAGCTCTCTTCCCTCTCTTTCTACATTACTTTCTTCCCTACAAACACAACAAAATATCATTCAAATCACTTTCAT
TTCAGTACCTTATAATTTATGTATCGATGATAGGCTCGATAACGTCGATGCATCACAGAAACCGCTACAAGCAACAACAATGAATATGCACGAAAGGGACATCAAGAACA
GGAGACTTGAGACATGCTTTATTTTCTTGATAAGGCAGCAAGAGGAAGAGCATCTGCAGAGGTGTTGGTTGGTGAAGATGGGCAACGTCGGTCTGTGGCTGAAGTTCGGA
GACAGGATCGGGATGGTGGTTGTTGTGACGATGGTTTCGTTGTTTCAAGAAGCGAGAAACGAGGTAGCAGAGGAGACGGAGAGAGGAAAGAATGGCTATGAGGAGTAA
Protein sequenceShow/hide protein sequence
MLVNPMESVCTCSSLPSLSTLLSSLQTQQNIIQITFISVPYNLCIDDRLDNVDASQKPLQATTMNMHERDIKNRRLETCFIFLIRQQEEEHLQRCWLVKMGNVGLWLKFG
DRIGMVVVVTMVSLFQEARNEVAEETERGKNGYEE