; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G028140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G028140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein UXT homolog
Genome locationchr02:34313842..34320065
RNA-Seq ExpressionLsi02G028140
SyntenyLsi02G028140
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0000785 - chromatin (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016592 - mediator complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR004127 - Prefoldin alpha-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1208268.1 hypothetical protein CJ030_MR7G027319 [Morella rubra]3.5e-4681.51Show/hide
Query:  IDHFRHEKVQRFEEFVDRRLKPDLVHAIAESSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLA
        +D FR +KVQRFEEFVDR LKPDLV AIAESSDLRRNIENLE+NS+ +LRTLVNLGSEVYVQ DVPDT+ IFVDVGLGFHVEFTWSEAL FIS +EE+LA
Subjt:  IDHFRHEKVQRFEEFVDRRLKPDLVHAIAESSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLA

Query:  RFVKGFVNYYNFQQRGLPK
        RFVKGF +Y+NFQQR L K
Subjt:  RFVKGFVNYYNFQQRGLPK

KAG6575525.1 Protein UXT-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.1e-6762.03Show/hide
Query:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDVGID+F++EKVQRFEEFVDRRLKPDLVHAIAE           SDLRRNIENLEKNSITNL TLVNLGSEVYVQG+V DTR IFVDVGLGFHVEFTWS
Subjt:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARFVKGFVNY---YNFQQRGLPKDVR-----PSDPFL--------LPLFP-FAMVCLGILFGCKRSRSPTDYLLSALLLIAILSSLR
        EALKFISLKEERLAR ++ + +       Q + + + +R     P++  +        LP+ P FAMVCLGILFGC  SRS TDYLLSALLLI ILSSLR
Subjt:  EALKFISLKEERLARFVKGFVNY---YNFQQRGLPKDVR-----PSDPFL--------LPLFP-FAMVCLGILFGCKRSRSPTDYLLSALLLIAILSSLR

Query:  LLCYLVSRFLKQRNHRHNNHHPDPVSELQPQTDVAHLHQPTPLPENKFLTP---ADAL-PLAALSR
        LLC  ++RFLK+   R  +  PDP  +LQPQ         TPLP+NK L     A AL PL A SR
Subjt:  LLCYLVSRFLKQRNHRHNNHHPDPVSELQPQTDVAHLHQPTPLPENKFLTP---ADAL-PLAALSR

XP_004141760.1 protein UXT homolog [Cucumis sativus]1.9e-4481.67Show/hide
Query:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDV  D+FRHEKVQRFEEFVDRRLKPDLVHAIAE           SDLRRNIENLEKNSITN+RTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARFVKGF
        EALKFISLKEERL R ++ +
Subjt:  EALKFISLKEERLARFVKGF

XP_008462175.1 PREDICTED: protein UXT homolog [Cucumis melo]8.7e-4582.5Show/hide
Query:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDVG D FR+EKVQRFEEFVDRRLKPDLVHAIAE           SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARFVKGF
        EALKFISLKEERL R ++ +
Subjt:  EALKFISLKEERLARFVKGF

XP_022159095.1 protein UXT homolog [Momordica charantia]1.9e-4480.83Show/hide
Query:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        M+VG D+FRHEKVQRFEEFVDRRLKPDLVHAIAE           SDLR+NIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARFVKGF
        EAL FISL+EERLAR ++ +
Subjt:  EALKFISLKEERLARFVKGF

TrEMBL top hitse value%identityAlignment
A0A0A0K7F1 Uncharacterized protein9.4e-4581.67Show/hide
Query:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDV  D+FRHEKVQRFEEFVDRRLKPDLVHAIAE           SDLRRNIENLEKNSITN+RTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARFVKGF
        EALKFISLKEERL R ++ +
Subjt:  EALKFISLKEERLARFVKGF

A0A1S3CHV4 protein UXT homolog4.2e-4582.5Show/hide
Query:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDVG D FR+EKVQRFEEFVDRRLKPDLVHAIAE           SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARFVKGF
        EALKFISLKEERL R ++ +
Subjt:  EALKFISLKEERLARFVKGF

A0A5D3BXW7 Protein UXT-like protein4.2e-4582.5Show/hide
Query:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDVG D FR+EKVQRFEEFVDRRLKPDLVHAIAE           SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARFVKGF
        EALKFISLKEERL R ++ +
Subjt:  EALKFISLKEERLARFVKGF

A0A6A1V8R2 Uncharacterized protein1.7e-4681.51Show/hide
Query:  IDHFRHEKVQRFEEFVDRRLKPDLVHAIAESSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLA
        +D FR +KVQRFEEFVDR LKPDLV AIAESSDLRRNIENLE+NS+ +LRTLVNLGSEVYVQ DVPDT+ IFVDVGLGFHVEFTWSEAL FIS +EE+LA
Subjt:  IDHFRHEKVQRFEEFVDRRLKPDLVHAIAESSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLA

Query:  RFVKGFVNYYNFQQRGLPK
        RFVKGF +Y+NFQQR L K
Subjt:  RFVKGFVNYYNFQQRGLPK

A0A6J1E2W3 protein UXT homolog9.4e-4580.83Show/hide
Query:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        M+VG D+FRHEKVQRFEEFVDRRLKPDLVHAIAE           SDLR+NIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARFVKGF
        EAL FISL+EERLAR ++ +
Subjt:  EALKFISLKEERLARFVKGF

SwissProt top hitse value%identityAlignment
A7T0W1 Protein UXT homolog1.2e-1241.28Show/hide
Query:  EKVQRFEEFVDRRLKPDL----------VHAIAESSDLRRNIENLEKNSI--TNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL
        EK++++EEF+D+RL  DL          V  I E + L+ +IE ++K  +   +LR+ V+LG   + Q  VPD   IF+ VG GF VEFT SEAL FI  
Subjt:  EKVQRFEEFVDRRLKPDL----------VHAIAESSDLRRNIENLEKNSI--TNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL

Query:  KEERLARFV
        K   L   V
Subjt:  KEERLARFV

Q32P97 Protein UXT5.2e-0837.86Show/hide
Query:  EKVQRFEEFVDRRLKPDL----------VHAIAESSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE
        EKV R+E F+   L+ DL             +A+   LR  IE L++ + + L   V+LG   +V   VPDT  I+V +G GF +E T +EALKFI  K 
Subjt:  EKVQRFEEFVDRRLKPDL----------VHAIAESSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE

Query:  ERL
          L
Subjt:  ERL

Q54ND3 Protein UXT homolog1.1e-1338.18Show/hide
Query:  RHEKVQRFEEFVDRRLKPDLVHAIAESS----------DLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL
        R + ++ +E F++  L  DL  +I +            +L+ NIE L +N + +++T++NLGSE YV+  V DT  I+VD+GLG HV++T  EA+KFI+ 
Subjt:  RHEKVQRFEEFVDRRLKPDLVHAIAESS----------DLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL

Query:  KEERLARFVK
        KE  L + V+
Subjt:  KEERLARFVK

Q9UBK9 Protein UXT6.7e-0837.86Show/hide
Query:  EKVQRFEEFVDRRLKPDL----------VHAIAESSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE
        EKV R+E F+   L+ DL             +A+   LR  IE L++   + L   V+LG   +V   VPDT  I+V +G GF +E T +EALKFI  K 
Subjt:  EKVQRFEEFVDRRLKPDL----------VHAIAESSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE

Query:  ERL
          L
Subjt:  ERL

Q9WTZ0 Protein UXT1.2e-0736.89Show/hide
Query:  EKVQRFEEFVDRRLKPDLVHAIAESS----------DLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE
        EKV R+E F+   L+ DL   +               LR  IE L++ + + L   V+LG   +V   VPDT  I+V +G GF +E T +EALKFI  K 
Subjt:  EKVQRFEEFVDRRLKPDLVHAIAESS----------DLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE

Query:  ERL
          L
Subjt:  ERL

Arabidopsis top hitse value%identityAlignment
AT1G26660.1 Prefoldin chaperone subunit family protein3.1e-2454.81Show/hide
Query:  RHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL
        R + +Q  EE +D+ LK  LVHA A            SDLR+N+E LEKN + +L+T VNLGSEVY+Q +VPDTR IF+DVGLGF+VEFT  EAL +I+ 
Subjt:  RHEKVQRFEEFVDRRLKPDLVHAIAES----------SDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL

Query:  KEER
        +EER
Subjt:  KEER

AT1G26660.2 Prefoldin chaperone subunit family protein6.4e-2244.96Show/hide
Query:  RHEKVQRFEEFVDRRLKPDLVHAIAE-----------------------------------SSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTR
        R + +Q  EE +D+ LK  LVHA A                                    SSDLR+N+E LEKN + +L+T VNLGSEVY+Q +VPDTR
Subjt:  RHEKVQRFEEFVDRRLKPDLVHAIAE-----------------------------------SSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTR

Query:  SIFVDVGLGFHVEFTWSEALKFISLKEER
         IF+DVGLGF+VEFT  EAL +I+ +EER
Subjt:  SIFVDVGLGFHVEFTWSEALKFISLKEER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTAGGAATTGATCATTTTCGGCATGAGAAAGTTCAAAGGTTCGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGTTCAGA
CCTTCGTCGGAACATTGAGAATTTGGAGAAAAATAGTATAACTAATCTCAGAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCGATGTGCCAGATACACGAA
GCATATTTGTAGATGTTGGGCTTGGGTTTCATGTCGAGTTCACATGGTCGGAAGCTTTAAAATTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGGTTTGTGAAGGGATTC
GTGAATTATTACAACTTCCAGCAGAGAGGACTGCCGAAGGACGTAAGGCCATCAGACCCTTTCCTGCTTCCCCTTTTCCCTTTTGCCATGGTTTGTCTTGGAATATTGTT
TGGCTGCAAAAGATCTCGCTCCCCAACAGACTATCTTCTCTCAGCTTTACTCCTCATAGCCATTCTTTCCTCTCTCCGTCTCCTCTGCTACCTCGTTTCTCGCTTCTTGA
AACAACGAAACCATCGTCACAACAACCACCATCCCGATCCTGTCTCCGAACTTCAGCCACAGACCGACGTTGCCCATCTTCACCAACCAACACCTCTGCCAGAAAACAAG
TTTCTTACACCTGCAGATGCTCTTCCTCTTGCTGCCTTATCAAGAAAA
mRNA sequenceShow/hide mRNA sequence
GGAACTAAAAATGTGATTATTCATTTCCGACCAAAAATATATTTATTTTCCTTCGAATTTACAAAGTAAGATTGATTTCAGCACCCTTACATAGCTCAATTTACTTACAA
ATATTTGACTCACAAGTAAAAACCCTAGAAGCCTATTCTGCCTCCATTTTCAACACTGGCGTATTGATTCACCATCCTCCCGCGCACAGCTACCGCTGCCGCTTACCGTT
GTTGCCGTTAGCTCCACTCCCTCTCCCGCTCATCTCGATGGCTCCATTCCTCCCACTCGCCGACGCCGCTGCGTTCCATCTCTAACAAATTCCCTACCAACCCAACTGAA
TTGGAGGATAGAAGTTTTGCCACTTTGTTGTTCATAACTATTTTAGAACACCCACAAGGCTGTCACGATCAGTTGTTATTTATTGATCATGGATGTAGGAATTGATCATT
TTCGGCATGAGAAAGTTCAAAGGTTCGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGTTCAGACCTTCGTCGGAACATTGAGAAT
TTGGAGAAAAATAGTATAACTAATCTCAGAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCGATGTGCCAGATACACGAAGCATATTTGTAGATGTTGGGCT
TGGGTTTCATGTCGAGTTCACATGGTCGGAAGCTTTAAAATTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGC
AGAGAGGACTGCCGAAGGACGTAAGGCCATCAGACCCTTTCCTGCTTCCCCTTTTCCCTTTTGCCATGGTTTGTCTTGGAATATTGTTTGGCTGCAAAAGATCTCGCTCC
CCAACAGACTATCTTCTCTCAGCTTTACTCCTCATAGCCATTCTTTCCTCTCTCCGTCTCCTCTGCTACCTCGTTTCTCGCTTCTTGAAACAACGAAACCATCGTCACAA
CAACCACCATCCCGATCCTGTCTCCGAACTTCAGCCACAGACCGACGTTGCCCATCTTCACCAACCAACACCTCTGCCAGAAAACAAGTTTCTTACACCTGCAGATGCTC
TTCCTCTTGCTGCCTTATCAAGAAAA
Protein sequenceShow/hide protein sequence
MDVGIDHFRHEKVQRFEEFVDRRLKPDLVHAIAESSDLRRNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKEERLARFVKGF
VNYYNFQQRGLPKDVRPSDPFLLPLFPFAMVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKQRNHRHNNHHPDPVSELQPQTDVAHLHQPTPLPENK
FLTPADALPLAALSRK