CuGenDBv2

Gene ID	Lsi02G028290
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Pyridoxamine 5'-phosphate oxidase family protein
Genome location	chr02:34497966..34499766
RNA-Seq Expression	Lsi02G028290
Synteny	Lsi02G028290
Gene Ontology terms	NA
InterPro domains	IPR012349 - FMN-binding split barrel

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0059333.1 uncharacterized protein E6C27_scaffold242G00580 [Cucumis melo var. makuwa]

4.7e-47

90.83

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DELNFTQ++EKNANE LK+DVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

TYK03992.1 uncharacterized protein E5676_scaffold347G001900 [Cucumis melo var. makuwa]

4.7e-47

90.83

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DELNFTQ++EKNANE LK+DVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

XP_004141750.1 uncharacterized protein LOC101216483 [Cucumis sativus]

2.2e-44

87.16

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DE+NFT+++EKNANE  KVDVSLTVPS  GSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

XP_008462202.1 PREDICTED: uncharacterized protein LOC103500616 [Cucumis melo]

4.7e-47

90.83

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DELNFTQ++EKNANE LK+DVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

XP_038899183.1 uncharacterized protein LOC120086545 [Benincasa hispida]

4.3e-48

91.74

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DE+NFTQSNEKNANEPL+VDVSLTVPSG GSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAK0 Uncharacterized protein

1.1e-44

87.16

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DE+NFT+++EKNANE  KVDVSLTVPS  GSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

A0A1S3CGC6 uncharacterized protein LOC103500616

2.3e-47

90.83

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DELNFTQ++EKNANE LK+DVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

A0A5A7UTT3 Uncharacterized protein

2.3e-47

90.83

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DELNFTQ++EKNANE LK+DVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

A0A5D3BYP2 Uncharacterized protein

2.3e-47

90.83

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DELNFTQ++EKNANE LK+DVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

A0A6J1JPF6 uncharacterized protein LOC111488659

1.1e-44

88.99

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Query:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS
        DELNFTQSNEKNANE LKVD SLT PS  GSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFA DS
Subjt:  DELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADS

Query:  MGRKSIRFN
        MG     F+
Subjt:  MGRKSIRFN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G51560.1 Pyridoxamine 5'-phosphate oxidase family protein

5.6e-38

76.47

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Query:  SNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADSMGRKSIR
        S EK++   + V+ SL VP GG  GTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMS+MHHRR+GYPFGSLVDFA D MG     
Subjt:  SNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADSMGRKSIR

Query:  FN
        F+
Subjt:  FN

AT3G21140.1 Pyridoxamine 5'-phosphate oxidase family protein

1.5e-35

70.19

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Query:  TQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADSMGRKS
        + SN + ++  + V+ SL  P GGG G RAGLFRTPISGGVQ+ATSAH LPRPALAVRNL+EQARFAHLCTVMS+MHHRR+GYPFGSLVDFA D MG   
Subjt:  TQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADSMGRKS

Query:  IRFN
          F+
Subjt:  IRFN

Sequences

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CDS sequence

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ATGCACGCTGATGAGCTAAATTTCACTCAAAGCAACGAGAAGAATGCAAATGAGCCCCTGAAGGTGGATGTATCTCTTACGGTTCCTTCTGGCGGTGGAAGTGGAACTAG
AGCCGGTCTTTTTAGAACACCAATATCTGGTGGTGTGCAGAGTGCAACCTCAGCACATGGTCTACCTAGACCGGCCTTAGCTGTCCGCAATCTTATGGAACAGGCCAGAT
TCGCTCATTTGTGCACGGTGATGTCTCGGATGCACCATCGCAGGCAAGGATATCCATTTGGTTCTTTAGTGGATTTTGCAGCTGACTCCATGGGCCGTAAGTCAATTAGA
TTCAACATTGGCCAGATAGTCTTTCCCTGTTAA

mRNA sequence

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Protein sequence

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MHADELNFTQSNEKNANEPLKVDVSLTVPSGGGSGTRAGLFRTPISGGVQSATSAHGLPRPALAVRNLMEQARFAHLCTVMSRMHHRRQGYPFGSLVDFAADSMGRKSIR
FNIGQIVFPC

Lsi02G028290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome