; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G028480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G028480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding protein with multiple splicing 2
Genome locationchr02:34648544..34652036
RNA-Seq ExpressionLsi02G028480
SyntenyLsi02G028480
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059349.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]7.7e-17794.4Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGD AHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  -----------NPFGKRKDATYPVSAPGANGTPQAMAYQ
                   NPFGKRKDA YPVSAPG NGTPQAMAYQ
Subjt:  -----------NPFGKRKDATYPVSAPGANGTPQAMAYQ

TYK03977.1 RNA-binding protein with multiple splicing [Cucumis melo var. makuwa]4.2e-17590.4Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGD AHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  --------------------------NPFGKRKDATYPVSAPGANGTPQAMAYQ
                                  NPFGKRKDA YPVSAPG NGTPQAMAYQ
Subjt:  --------------------------NPFGKRKDATYPVSAPGANGTPQAMAYQ

XP_004141738.1 RNA-binding protein with multiple splicing 2 [Cucumis sativus]7.7e-17795.22Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGD AHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ
               NPFGKRKDA YPVSAPG NGTPQAMAYQ
Subjt:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ

XP_008462228.1 PREDICTED: RNA-binding protein with multiple splicing [Cucumis melo]2.7e-17795.52Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGD AHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ
               NPFGKRKDA YPVSAPG NGTPQAMAYQ
Subjt:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ

XP_038898734.1 RNA-binding protein with multiple splicing 2 [Benincasa hispida]1.0e-17695.82Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAAPPPIPHPH PQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGD AHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ
               NPFGKRKDATYPVSAPGANGTPQAMAYQ
Subjt:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ

TrEMBL top hitse value%identityAlignment
A0A0A0K6S7 RRM domain-containing protein3.7e-17795.22Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADAS YDQSKRLRTGGD AHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ
               NPFGKRKDA YPVSAPG NGTPQAMAYQ
Subjt:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ

A0A1S3CH02 RNA-binding protein with multiple splicing1.3e-17795.52Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGD AHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ
               NPFGKRKDA YPVSAPG NGTPQAMAYQ
Subjt:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ

A0A5A7V0M8 RNA-binding protein with multiple splicing3.7e-17794.4Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGD AHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  -----------NPFGKRKDATYPVSAPGANGTPQAMAYQ
                   NPFGKRKDA YPVSAPG NGTPQAMAYQ
Subjt:  -----------NPFGKRKDATYPVSAPGANGTPQAMAYQ

A0A5D3BWV1 RNA-binding protein with multiple splicing2.1e-17590.4Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGD AHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  --------------------------NPFGKRKDATYPVSAPGANGTPQAMAYQ
                                  NPFGKRKDA YPVSAPG NGTPQAMAYQ
Subjt:  --------------------------NPFGKRKDATYPVSAPGANGTPQAMAYQ

A0A6J1D0G5 RNA-binding protein with multiple splicing 21.6e-17293.43Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL
        MAGTGIHPYHQQWPAAAAAPPPPPPQA AAA PPIP PHPPQILVDNPGRH SDEVRTIFITGLPEDV+ERELQNLLRWLPGYEASQVNFKGEKPMGFAL
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFAL

Query:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA
        FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGD AHTGYSSPSPFHAPPPP+WGPHGYMAPPPPPYDPYGGY 
Subjt:  FSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYA

Query:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--
        VPPVPMP PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEEL GLFSVQPGFKQMKILRQERHTVCFIEFEDVN ATNVHHSLQGAVIPSSGS  
Subjt:  VPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGS--

Query:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ
               NPFGKRKDATYPVSAP  NGTPQAMAYQ
Subjt:  -------NPFGKRKDATYPVSAPGANGTPQAMAYQ

SwissProt top hitse value%identityAlignment
Q6ZRY4 RNA-binding protein with multiple splicing 21.6e-1243.68Show/hide
Query:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        G    +EVRT+F++GLP D+K REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q8VC52 RNA-binding protein with multiple splicing 21.3e-1243.68Show/hide
Query:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN
        G    +EVRT+F++GLP D+K REL  L R   GYE S +     +P+GF +F +   A AAK+AL  + FD E+   L  E AK N
Subjt:  GRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKN

Q93062 RNA-binding protein with multiple splicing3.2e-0830.95Show/hide
Query:  DEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSK
        +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD E    L  E AK N  + +  +          
Subjt:  DEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSK

Query:  RLRTGGDCAHTGYSSPSP-FHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPVPMPAPAPVPAPSSYVP
                A   Y    P  +   P +W P+       P Y      A+PP     PA + A   ++P
Subjt:  RLRTGGDCAHTGYSSPSP-FHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPVPMPAPAPVPAPSSYVP

Q9W6I1 RNA-binding protein with multiple splicing 29.3e-0829.44Show/hide
Query:  NPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD
        N G +  +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+AL  + FD E+   L  E AK N    K  ++A 
Subjt:  NPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVAD

Query:  ASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPVPMPAPAPVPAPSSYVPVQNTK
         +  +    L            + +      P  W P+        P  P+  +  P     A A       Y P + T+
Subjt:  ASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPVPMPAPAPVPAPSSYVPVQNTK

Q9YGP5 RNA-binding protein with multiple splicing 22.9e-0931.29Show/hide
Query:  DNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVA
        ++   +  +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F N   A AAK+AL  + FD E+   L  E AK N    K  ++A
Subjt:  DNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVA

Query:  DASAYDQSKRLRTGGDCAHTGYSSPSPFHA-----PPPPIWGPHGYMAPPPPPYDPYGGYAVP
          +  +    L      AH     P  F         P  W P+        P  P+  +  P
Subjt:  DASAYDQSKRLRTGGDCAHTGYSSPSPFHA-----PPPPIWGPHGYMAPPPPPYDPYGGYAVP

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-2936.05Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP      +P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+                 G    P      Y      P 
Subjt:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPV

Query:  PMPAPAPVP--APSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSS
             A V   AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS
Subjt:  PMPAPAPVP--APSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSS

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-2936.05Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP      +P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+                 G    P      Y      P 
Subjt:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPV

Query:  PMPAPAPVP--APSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSS
             A V   AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS
Subjt:  PMPAPAPVP--APSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSS

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-2936.05Show/hide
Query:  IHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA
        +  Y+  +   A  PPPPP      +P PI   H    L  +    A DEVRT+F+ GLPEDVK RE+ NL R  PGYE S + +  G KP  FA+FS+ 
Subjt:  IHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNA

Query:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPV
        Q A+A   AL  MVFD E  S LH ++AK N   KR    D   ++  K+L++      +G+                 G    P      Y      P 
Subjt:  QFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPV

Query:  PMPAPAPVP--APSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSS
             A V   AP+S  P   +K   PC TLFI N+G N  E EL  +FS   GF ++KI       V F++F+DV+ ++   H+LQG V+ SS
Subjt:  PMPAPAPVP--APSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSS

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-2032Show/hide
Query:  PHPHPPQ--ILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEM
        PH  PPQ  +L D PG      + T+F++GLP DVK RE+ NL R   G+E+ Q+ +  +G++ + FA F++ +FA+AA + L  + FD ++ S LH E+
Subjt:  PHPHPPQ--ILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNF--KGEKPMGFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEM

Query:  AKKNLFVKRG------IVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPVPMPAPAPVPAPSSYVPVQNTK
        A+ N   K        +V D    + SK   +  D +  G S P     P           +  P   D     A       +     APS+   ++   
Subjt:  AKKNLFVKRG------IVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPVPMPAPAPVPAPSSYVPVQNTK

Query:  DN----PPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSS
        +       C+TLFI NLG N  E+EL+ L S  PGF  +KI  +    V F +FE++  AT+  + LQG ++ SS
Subjt:  DN----PPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSS

AT3G21215.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-13875.29Show/hide
Query:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIP----HPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPM
        MAG GIHPYHQQWP A A  PPPP   ++AAPP  P    HP PP +LVDN  R   DE+RTIFI GLP+DVKEREL NLLRWLPGYEASQVNFKGEKPM
Subjt:  MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIP----HPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPM

Query:  GFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYDP
        GFALFS AQFA+AAKD LQ MVFDAESKSV+HTEMAKKNLFVKRGIV D++AYDQSKRLRTGGDC H+ Y SPSPFH PPPP+WG PHGYMAP PPPYDP
Subjt:  GFALFSNAQFAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWG-PHGYMAPPPPPYDP

Query:  YGGYAVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPS
        Y GY  PPVPMP P P+ APSSYVPVQN KDNPPCNTLFIGNLGEN+NEEELR L S QPGFKQMKILRQERHTVCFIEFEDVN+ATNVHH+LQGAVIPS
Subjt:  YGGYAVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPS

Query:  SGS---------NPFGKRKD----ATYPVSAPGANGTPQAMAYQ
        SGS         NP+GKRK+    + +P  +P ANG   A+ YQ
Subjt:  SGS---------NPFGKRKD----ATYPVSAPGANGTPQAMAYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTACTGGAATCCACCCGTACCACCAGCAATGGCCTGCTGCCGCCGCCGCTCCTCCTCCTCCTCCGCCACAAGCCACCGCCGCTGCTCCTCCTCCCATTCCCCA
CCCCCATCCTCCTCAGATCCTTGTCGACAACCCCGGCCGCCATGCCTCTGATGAGGTTCGAACTATATTTATAACTGGTCTTCCTGAAGATGTAAAAGAGAGAGAGCTAC
AGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCACAAGTAAATTTCAAAGGTGAAAAGCCTATGGGCTTTGCTCTATTCTCCAATGCCCAGTTTGCTATTGCTGCG
AAAGATGCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTATTTGTTAAACGAGGCATTGTTGCTGATGCAAG
TGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGACTGTGCCCACACCGGATATTCAAGCCCATCACCTTTTCATGCACCTCCACCCCCTATTTGGGGGCCTCATG
GGTATATGGCTCCACCTCCTCCTCCATACGATCCGTATGGAGGTTACGCTGTTCCTCCTGTACCTATGCCTGCTCCTGCACCTGTACCAGCACCTAGCAGCTATGTGCCT
GTTCAGAACACTAAAGATAATCCTCCTTGCAATACCCTGTTTATTGGCAATCTGGGGGAAAATGTAAATGAAGAGGAACTCAGAGGTCTTTTTAGCGTACAGCCTGGATT
TAAGCAAATGAAGATTCTGAGGCAGGAAAGGCACACGGTGTGCTTCATTGAGTTTGAAGATGTGAACGCTGCCACCAATGTGCATCATAGTTTGCAGGGTGCTGTTATCC
CTAGTTCCGGCTCTAACCCGTTTGGGAAACGGAAGGATGCTACCTACCCTGTTTCTGCTCCTGGCGCGAACGGAACTCCACAAGCTATGGCATACCAATAG
mRNA sequenceShow/hide mRNA sequence
TGGGGAGTAGTTGGACCAGAGTGTTTAATAAGGCCCAACGGCGAAGAACAACTCACGATGCTTGGCGCGCAGGGCGGCGTTTTTGATCTTCTTCTTAGGTTTTTCCCCCG
GAAACTTCCAAATCCGTATCACAGCACTGCCCAGAACGCCAACAAATTCACCATTTTTGTCAACACGAAGAAGAAGAAGCTGAAATCCACAAATTTGGTTGCCTCCATAC
TCCTTTCTTGCTTCATACTCCTCCTTTCCACTCGTTTTTACTCATGGCCGGTACTGGAATCCACCCGTACCACCAGCAATGGCCTGCTGCCGCCGCCGCTCCTCCTCCTC
CTCCGCCACAAGCCACCGCCGCTGCTCCTCCTCCCATTCCCCACCCCCATCCTCCTCAGATCCTTGTCGACAACCCCGGCCGCCATGCCTCTGATGAGGTTCGAACTATA
TTTATAACTGGTCTTCCTGAAGATGTAAAAGAGAGAGAGCTACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCACAAGTAAATTTCAAAGGTGAAAAGCCTAT
GGGCTTTGCTCTATTCTCCAATGCCCAGTTTGCTATTGCTGCGAAAGATGCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCA
AGAAAAATCTATTTGTTAAACGAGGCATTGTTGCTGATGCAAGTGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGACTGTGCCCACACCGGATATTCAAGCCCA
TCACCTTTTCATGCACCTCCACCCCCTATTTGGGGGCCTCATGGGTATATGGCTCCACCTCCTCCTCCATACGATCCGTATGGAGGTTACGCTGTTCCTCCTGTACCTAT
GCCTGCTCCTGCACCTGTACCAGCACCTAGCAGCTATGTGCCTGTTCAGAACACTAAAGATAATCCTCCTTGCAATACCCTGTTTATTGGCAATCTGGGGGAAAATGTAA
ATGAAGAGGAACTCAGAGGTCTTTTTAGCGTACAGCCTGGATTTAAGCAAATGAAGATTCTGAGGCAGGAAAGGCACACGGTGTGCTTCATTGAGTTTGAAGATGTGAAC
GCTGCCACCAATGTGCATCATAGTTTGCAGGGTGCTGTTATCCCTAGTTCCGGCTCTAACCCGTTTGGGAAACGGAAGGATGCTACCTACCCTGTTTCTGCTCCTGGCGC
GAACGGAACTCCACAAGCTATGGCATACCAATAG
Protein sequenceShow/hide protein sequence
MAGTGIHPYHQQWPAAAAAPPPPPPQATAAAPPPIPHPHPPQILVDNPGRHASDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAA
KDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDCAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGGYAVPPVPMPAPAPVPAPSSYVP
VQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNAATNVHHSLQGAVIPSSGSNPFGKRKDATYPVSAPGANGTPQAMAYQ