; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G028590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G028590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like
Genome locationchr02:34808977..34809699
RNA-Seq ExpressionLsi02G028590
SyntenyLsi02G028590
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059359.1 putative Senescence-associated protein 21 [Cucumis melo var. makuwa]3.6e-2682.89Show/hide
Query:  LSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK
        +SSS+A+EQL  QTTASMV RKVKAAVET+ YDNE V+QK+TFWMKDPKSGNWIPE+HFEEIDVVELREKLL KPK
Subjt:  LSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK

KAE8646489.1 hypothetical protein Csa_015817 [Cucumis sativus]7.3e-2784.21Show/hide
Query:  LSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK
        +SSSVA+EQL  QTTASMV RKVKAAVET GYDNE V+QK+TFWMKDPKSGNWIPE+HFEE+DVVELREKLL KPK
Subjt:  LSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK

KAG6575415.1 hypothetical protein SDJN03_26054, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2470.33Show/hide
Query:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDN-EAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK
        MAK+TGNG+YFIRRLSS VA+EQL  + TA M  + V A VET+G D+ +AV+QK  FWMKDPKSGNWIPE+HF EIDVVELREKLL K K
Subjt:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDN-EAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK

XP_022843012.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Olea europaea var. sylvestris]4.6e-1352.27Show/hide
Query:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPK
        MAK + N L  + R  S+VA E   TQTT S V ++V  +V           +K+ FWMKDPK+GNWIPE+HFE+IDV ELREKLL K
Subjt:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPK

XP_022853417.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like isoform X1 [Olea europaea var. sylvestris]7.9e-1351.14Show/hide
Query:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPK
        MAK   N L  + R +S++A E   TQT  S V +KV  +V           +KE FWM+DPK+GNWIPE+HFE+IDV ELREKLL K
Subjt:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPK

TrEMBL top hitse value%identityAlignment
A0A0A0K7L4 Uncharacterized protein6.0e-3585.56Show/hide
Query:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK
        MAKVTGN LYFIRR+SSSVA+EQL  QTTASMV RKVKAAVET GYDNE V+QK+TFWMKDPKSGNWIPE+HFEE+DVVELREKLL KPK
Subjt:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK

A0A5D3BWU2 Putative Senescence-associated protein 211.8e-2682.89Show/hide
Query:  LSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK
        +SSS+A+EQL  QTTASMV RKVKAAVET+ YDNE V+QK+TFWMKDPKSGNWIPE+HFEEIDVVELREKLL KPK
Subjt:  LSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK

A0A6A1VZA4 Uncharacterized protein2.5e-1255.56Show/hide
Query:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK
        MAKV  N L  + R S SVA   L        V    + A E++G   EA +QKE FWMKD KSGNWIPESHF EIDVV+LREKLLP+ K
Subjt:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK

A0A7N2LLH6 Uncharacterized protein1.9e-1254.44Show/hide
Query:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK
        MA+V  + L  +RR + SVA E    Q   ++    VK A E+ G    A +QKE FWM+DPKSGNWIPESHF EI+V ELREKLLPK K
Subjt:  MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPK

F6HXN7 Uncharacterized protein7.2e-1246.74Show/hide
Query:  MAKV-TGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPKP
        MAKV   + L F  R S + A E    Q  AS V + + +   ++     A +QKE+FWMKDPK+GNWIPE+HF++ DVV LREK LP+  P
Subjt:  MAKV-TGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAGTTACTGGAAATGGTCTGTACTTTATAAGGCGACTGAGCTCTTCAGTTGCAACCGAGCAACTTAACACACAAACAACTGCATCAATGGTGGCGAGGAAGGT
GAAGGCAGCTGTGGAAACAAACGGTTATGATAATGAGGCAGTTAAACAGAAGGAGACATTTTGGATGAAAGATCCCAAGAGTGGAAACTGGATTCCTGAGAGCCACTTTG
AAGAGATTGATGTGGTGGAATTGAGGGAGAAACTGCTACCTAAACCTAAACCTAAGAAGCTGCTCTAA
mRNA sequenceShow/hide mRNA sequence
TACAAACTAAAAATGCATTCTCCTTCTTCAGCACTTCACCTTCTATGTCTCCCTTCCAAATTATAAATATTGTGTATGTGTGATCCTTCCATTCAAACCCAAAAATAGAA
AAGGAAAACTTCCGCTTTCTCTCTCAACATTCTTCTTCTTTAAGACATGGCTAAAGTTACTGGAAATGGTCTGTACTTTATAAGGCGACTGAGCTCTTCAGTTGCAACCG
AGCAACTTAACACACAAACAACTGCATCAATGGTGGCGAGGAAGGTGAAGGCAGCTGTGGAAACAAACGGTTATGATAATGAGGCAGTTAAACAGAAGGAGACATTTTGG
ATGAAAGATCCCAAGAGTGGAAACTGGATTCCTGAGAGCCACTTTGAAGAGATTGATGTGGTGGAATTGAGGGAGAAACTGCTACCTAAACCTAAACCTAAGAAGCTGCT
CTAAAACAGCAAGTGAAAAGCTTCATTTATGTGCAAGAACAATATTTCCATCTGTATCCATCTTATCCATGCTTTACTAAATAACACTTGTTGCAAAAACTATTCTGCAC
TACTTTTCTCTCTCTCTCTCTCTCTCTCTCTTTAATCTGTCACTTCTATCAGTTTCAAGTCTCAAATGAATCCTCT
Protein sequenceShow/hide protein sequence
MAKVTGNGLYFIRRLSSSVATEQLNTQTTASMVARKVKAAVETNGYDNEAVKQKETFWMKDPKSGNWIPESHFEEIDVVELREKLLPKPKPKKLL