; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G028750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G028750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAcyl carrier protein
Genome locationchr02:34960577..34963275
RNA-Seq ExpressionLsi02G028750
SyntenyLsi02G028750
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009536 - plastid (cellular component)
GO:0000036 - acyl carrier activity (molecular function)
GO:0031177 - phosphopantetheine binding (molecular function)
InterPro domainsIPR003231 - Acyl carrier protein (ACP)
IPR009081 - Phosphopantetheine binding ACP domain
IPR036736 - ACP-like superfamily
IPR044813 - Acyl carrier protein, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059374.1 acyl carrier protein 1 [Cucumis melo var. makuwa]2.2e-5481.17Show/hide
Query:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGAS-PNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT
        S+FAS PLP TLPC S +RNKS      ++LSA+DG+LF G R+FP+MK+AKAAKGAS  + +FKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQT
Subjt:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGAS-PNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT

Query:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA+
Subjt:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

KAE8646494.1 hypothetical protein Csa_016687 [Cucumis sativus]6.9e-5681.82Show/hide
Query:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGASP-NPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT
        SSFAS PLPTT  C S +RNKS      +SLSARDG+LFCG R+FP+MK+AKAAKGAS  + +F+SKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQT
Subjt:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGASP-NPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT

Query:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        KFSDLGADSLDTVEIMMALEE+FGVSIGEGGAEGISTVQDAADLIEKVKASSA+
Subjt:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

XP_008462262.1 PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Cucumis melo]1.9e-5380.52Show/hide
Query:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGAS-PNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT
        S+FAS PLP TL C S +RNKS      ++LSA+DG+LF G R+FP+MK+AKAAKGAS  + +FKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQT
Subjt:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGAS-PNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT

Query:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA+
Subjt:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

XP_023514490.1 acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]3.0e-4371.24Show/hide
Query:  MSSFASLPLPTTLPCNSLIRNKSSSLSARD----GTLFCGRRLFPNMKIAKAAKGASPNPT-FKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTK
        MSS A  PL TTL   + I N ++  S        +LFC +R+FP++++AK A+G    PT FKS ISCSLAQPET++VVQEIIAKQLSLEQSAVIPQTK
Subjt:  MSSFASLPLPTTLPCNSLIRNKSSSLSARD----GTLFCGRRLFPNMKIAKAAKGASPNPT-FKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTK

Query:  FSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        FS+LGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVK SSA+
Subjt:  FSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

XP_038897463.1 acyl carrier protein-like [Benincasa hispida]5.6e-5884.97Show/hide
Query:  MSSFASLPLPTTLPCNSLIRNKS-----SSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTK
        MSSF SLPL TTLPC    RNKS     SSLSARDGTL CG+RLF NM++AKA+KGAS  PTFKS ISCSLAQPETL+VVQEIIAKQLSLEQSAVIPQTK
Subjt:  MSSFASLPLPTTLPCNSLIRNKS-----SSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTK

Query:  FSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        FSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDA DLIEKVKASSA+
Subjt:  FSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

TrEMBL top hitse value%identityAlignment
A0A0A0K6W2 Acyl carrier protein6.1e-5083.21Show/hide
Query:  IRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGASP-NPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMM
        +RNKS      +SLSARDG+LFCG R+FP+MK+AKAAKGAS  + +F+SKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMM
Subjt:  IRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGASP-NPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMM

Query:  ALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        ALEE+FGVSIGEGGAEGISTVQDAADLIEKVKASSA+
Subjt:  ALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

A0A1S3CGK8 Acyl carrier protein9.0e-5480.52Show/hide
Query:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGAS-PNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT
        S+FAS PLP TL C S +RNKS      ++LSA+DG+LF G R+FP+MK+AKAAKGAS  + +FKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQT
Subjt:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGAS-PNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT

Query:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA+
Subjt:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

A0A5A7UWB3 Acyl carrier protein1.1e-5481.17Show/hide
Query:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGAS-PNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT
        S+FAS PLP TLPC S +RNKS      ++LSA+DG+LF G R+FP+MK+AKAAKGAS  + +FKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQT
Subjt:  SSFASLPLPTTLPCNSLIRNKS------SSLSARDGTLFCGRRLFPNMKIAKAAKGAS-PNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQT

Query:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA+
Subjt:  KFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

A0A6J1HII2 Acyl carrier protein5.5e-4373.15Show/hide
Query:  MSSFASLPLPTTLPCNSLIRNKSSSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPT-FKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDL
        MSS AS PL TTL   +L    SS  + R       RR+FP+++ AKAA+G    PT FKS ISCSLAQPET++VVQEIIAKQLSLEQS VIPQTKFS+L
Subjt:  MSSFASLPLPTTLPCNSLIRNKSSSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPT-FKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDL

Query:  GADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        GADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVK SSA+
Subjt:  GADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

A0A6J1HKE0 Acyl carrier protein3.0e-4171.24Show/hide
Query:  MSSFASLPLPTTLPCNSLIRNKSSSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPT-FKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDL
        MSS AS PL TTL   +L    SS  + R       RR+FP+++ AKAA+G    PT FKS ISCSLAQPET++VVQEIIAKQLSLEQS VIPQTKFS+L
Subjt:  MSSFASLPLPTTLPCNSLIRNKSSSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPT-FKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDL

Query:  GADSLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN
        GADSLDT    VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVK SSA+
Subjt:  GADSLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

SwissProt top hitse value%identityAlignment
P32887 Acyl carrier protein, chloroplastic1.2e-1554.88Show/hide
Query:  ISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        +SC+ A+PET+E V +I+ KQLSL +   V+ +TKF+DLGADSLDTVEI+M LEE+F + + E  A+ I+TV++AA+LIE++
Subjt:  ISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

P52411 Acyl carrier protein 1, chloroplastic7.7e-1849.57Show/hide
Query:  SARDGTLFCGRRLFPNMKIAKAAKGASPNPTFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGG
        S R  +L   R+ FP++K +K+        +F  ++SC  A+PET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+M LEE+FG+S+ E  
Subjt:  SARDGTLFCGRRLFPNMKIAKAAKGASPNPTFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGG

Query:  AEGISTVQDAADLIEKV
        A+ I TVQDAADLIEK+
Subjt:  AEGISTVQDAADLIEKV

P52412 Acyl carrier protein 2, chloroplastic7.2e-1656.32Show/hide
Query:  TFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        +F  +++C  A+PET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+M LEE+FG+S+ E  A+ I TVQDAADLIEK+
Subjt:  TFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

P52414 Acyl carrier protein 4, chloroplastic2.2e-1746.51Show/hide
Query:  CNSLIRNKSSSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPTFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMAL
        C+ L   + SSL  R  +L   R+ FP+++ +K +          +++SC  A+PET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+M L
Subjt:  CNSLIRNKSSSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPTFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMAL

Query:  EEKFGVSIGEGGAEGISTVQDAADLIEKV
        EE+FG+S+ E  A+ I TVQDAADLIEK+
Subjt:  EEKFGVSIGEGGAEGISTVQDAADLIEKV

P93092 Acyl carrier protein 1, chloroplastic2.9e-1758.54Show/hide
Query:  ISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        + C  A+PET+E V  I+ KQL+L + SAV  ++KF+ LGADSLDTVEI+M LEE+FG+++ E  A+ I+TVQDAADLIEK+
Subjt:  ISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

Arabidopsis top hitse value%identityAlignment
AT1G54580.1 acyl carrier protein 21.8e-1441.54Show/hide
Query:  SLIRNKSSSLSARDGTLFCGR---RLFPNMKIAKAAKGASPNPTFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMA
        S+  + S SL AR   L       + F N + +  +      PT +  +SC+ A+PET++ V  ++ KQLSL E   +   TKF+ LGADSLDTVEI+M 
Subjt:  SLIRNKSSSLSARDGTLFCGR---RLFPNMKIAKAAKGASPNPTFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMA

Query:  LEEKFGVSIGEGGAEGISTVQDAADLIEKV
        LEE+FG+ + E  A+ I+TV+ AA LIE++
Subjt:  LEEKFGVSIGEGGAEGISTVQDAADLIEKV

AT1G54630.1 acyl carrier protein 31.4e-1438.85Show/hide
Query:  SLIRNKSSSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPTFKSK-------ISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVE
        S+  + S+SL AR   L  G +     ++   + G+  N +F  +       + C+ A+PET++ V  ++ KQLSL E   +   TKF+ LGADSLDTVE
Subjt:  SLIRNKSSSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPTFKSK-------ISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVE

Query:  IMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA
        I+M LEE+FG+ + E  A+ I+TV+ AA LIE++    A
Subjt:  IMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA

AT3G05020.1 acyl carrier protein 11.3e-1551.14Show/hide
Query:  PTFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        P+ +  +SC+ A+ ET+E V  I+ KQLSL     V+ +TKF+DLGADSLDTVEI+M LEE+F + + E  A+ I+TV+ AA+LIE++
Subjt:  PTFKSKISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

AT4G25050.1 acyl carrier protein 41.6e-1550.56Show/hide
Query:  SPNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSA-VIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIE
        S   + + +ISC+ A+ ET++ V +I+ +QL+L     +  ++KFS LGADSLDTVEI+MALEEKF +S+ E  A+ I+T+Q+AADLIE
Subjt:  SPNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSA-VIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIE

AT5G27200.1 acyl carrier protein 57.4e-1656.1Show/hide
Query:  ISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        +SC++ Q ET+E V EI+ KQLSL +   V   TKF++LGADSLDTVEI+M LEE+FG+++ E  A+ I+TVQ AA+LIE++
Subjt:  ISCSLAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCTTTGCTTCGTTGCCGCTTCCCACAACGCTTCCCTGCAACTCTTTGATAAGAAATAAGAGTAGTAGTCTATCTGCGAGAGATGGTACTTTGTTTTGTGGACG
GAGGCTGTTTCCCAACATGAAAATAGCAAAGGCTGCAAAAGGAGCATCCCCAAATCCCACCTTCAAATCAAAGATTTCTTGCTCCCTTGCCCAACCAGAAACACTGGAAG
TTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTGGAACAAAGCGCAGTGATCCCTCAAACAAAGTTTTCTGATTTGGGAGCTGATTCTCTTGACACCGTTGAGATCATG
ATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCTGAGGGCATCTCTACCGTTCAAGACGCTGCCGATCTGATCGAGAAAGTCAAGGCATCCTCTGC
AAATTAA
mRNA sequenceShow/hide mRNA sequence
TTTTAACCTTCCTTTTCAAATCTCATTAAACACATAGCCTCCCATCCATCTCATTTCCGTCATGTCGTCCTTTGCTTCGTTGCCGCTTCCCACAACGCTTCCCTGCAACT
CTTTGATAAGAAATAAGAGTAGTAGTCTATCTGCGAGAGATGGTACTTTGTTTTGTGGACGGAGGCTGTTTCCCAACATGAAAATAGCAAAGGCTGCAAAAGGAGCATCC
CCAAATCCCACCTTCAAATCAAAGATTTCTTGCTCCCTTGCCCAACCAGAAACACTGGAAGTTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTGGAACAAAGCGCAGT
GATCCCTCAAACAAAGTTTTCTGATTTGGGAGCTGATTCTCTTGACACCGTTGAGATCATGATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCTG
AGGGCATCTCTACCGTTCAAGACGCTGCCGATCTGATCGAGAAAGTCAAGGCATCCTCTGCAAATTAAACCAAACAGCAACATATCTATTCATGCCTTCAAATCCCAATA
ATTTTGCATTAGATCAGTTTGTTATGGTTTTGTTTTGTTCATCTTTATTTCAAGTAAGTTGTTTGTGGTTCAAAAGTGACATGAAGACCAAAGAAAGAAGAGTTGCAATC
TGAATGAAATAATACTATACATTATATACA
Protein sequenceShow/hide protein sequence
MSSFASLPLPTTLPCNSLIRNKSSSLSARDGTLFCGRRLFPNMKIAKAAKGASPNPTFKSKISCSLAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIM
MALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN