; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G028900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G028900
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function (DUF1677)
Genome locationchr02:35130271..35130735
RNA-Seq ExpressionLsi02G028900
SyntenyLsi02G028900
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575437.1 hypothetical protein SDJN03_26076, partial [Cucurbita argyrosperma subsp. sororia]3.5e-7190.91Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSDTILEPQ ASTKLIAHME EFVKC CCGL EECTPAYI+RVRERY+ +WICGLCSEAINYEILRS SLITAEEAME HMNLCKKFTALKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS
        P VHLI+AMRQILKRSLDSPSRA+RSMPTSP KKASRPPPLARTGSCLSSLSGS
Subjt:  PTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS

KAG7013981.1 hypothetical protein SDJN02_24151, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-7190.91Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSDTILEPQ ASTKLIAHME EFVKC CCGL EECTPAYI+RVRERY+ +WICGLCSEAINYEILRS SLITAEEAME HMNLCKKFTALKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS
        P VHLI+AMRQILKRSLDSPSRA+RSMPTSP KKASRPPPLARTGSCLSSLSGS
Subjt:  PTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS

XP_004141709.1 uncharacterized protein LOC101205671 [Cucumis sativus]1.5e-7494.19Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSDTILEPQTASTKLI HMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAI YEILRSDSLITAEEAMENHMNLCKKFT+LKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS
        PTVHLITAMRQILKRSLDSP SRA+RSMPTSPTKK SRPP L RTGSC SSLSGS
Subjt:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS

XP_008462290.1 PREDICTED: uncharacterized protein LOC103500683 [Cucumis melo]6.4e-7394.23Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSDTILEPQTASTKLI HMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASR-PPPLARTGSCLSSLSGS
        PTVHLITAMRQILKRSLDSP SRA+RSMPTSPTKK SR PP L RTGS  SSLSGS
Subjt:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASR-PPPLARTGSCLSSLSGS

XP_038896664.1 uncharacterized protein LOC120084928 [Benincasa hispida]4.4e-7493.55Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSDTILEPQTASTKLIAHMEAEFV+CDCCGL EECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHM LCKKFTALKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS
        PTVHLITAMRQILKRSLDSP SRA+RSMPTSPTKK SRPP L RTGSC SS+SGS
Subjt:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS

TrEMBL top hitse value%identityAlignment
A0A0A0K7Q6 Uncharacterized protein7.4e-7594.19Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSDTILEPQTASTKLI HMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAI YEILRSDSLITAEEAMENHMNLCKKFT+LKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS
        PTVHLITAMRQILKRSLDSP SRA+RSMPTSPTKK SRPP L RTGSC SSLSGS
Subjt:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS

A0A1S3CGK0 uncharacterized protein LOC1035006833.1e-7394.23Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSDTILEPQTASTKLI HMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASR-PPPLARTGSCLSSLSGS
        PTVHLITAMRQILKRSLDSP SRA+RSMPTSPTKK SR PP L RTGS  SSLSGS
Subjt:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASR-PPPLARTGSCLSSLSGS

A0A5D3BWR1 Uncharacterized protein3.1e-7394.23Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSDTILEPQTASTKLI HMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASR-PPPLARTGSCLSSLSGS
        PTVHLITAMRQILKRSLDSP SRA+RSMPTSPTKK SR PP L RTGS  SSLSGS
Subjt:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASR-PPPLARTGSCLSSLSGS

A0A6J1DKE6 uncharacterized protein LOC1110213467.2e-7087.74Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSDTILE  TAS KLIAHME EFVKCDCCGL+EECTPAYIERVRERY+GNWICGLCSEAINYEILRSDSLITAEEAME+HM LCKKFT+LKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS
        P VHLI AMRQILKRS+DSP +RA+RSMP+SPTKK+SRPPPLAR+GSCLSSLS S
Subjt:  PTVHLITAMRQILKRSLDSP-SRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS

A0A6J1HLD2 uncharacterized protein LOC1114645706.1e-6988.31Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN
        MSATVLSD+I+EPQTAST LI HMEAEFVKC CCGLTEECTPAYIERVRERY+ NWICGLCSEAINYEILRS  LITAEEAMENHMNLCKKFTALKPPPN
Subjt:  MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPN

Query:  PTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS
        PTVHLITAMRQILKRSLDSPSR +RSMP SPTKK SR P L+R+ SCLSSLSGS
Subjt:  PTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54095.1 Protein of unknown function (DUF1677)1.4e-2041.96Show/hide
Query:  EAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILR---SDSLITAEEAMENHMNLCKKFTALKPPPNPTVHLITAMRQILKRSLDSPS
        E  F +C+CCG+ EE T  YIE VR  Y+G +ICGLCSEA+ YEI R       I  +EA+  HM  C +F A    P+PTV  I A+ +I KR      
Subjt:  EAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILR---SDSLITAEEAMENHMNLCKKFTALKPPPNPTVHLITAMRQILKRSLDSPS

Query:  RAIRSMPTSPTKKASRPPP-----------LARTGSCLSSLSG
        R I ++P+  T  AS PP            +   GSCL +LSG
Subjt:  RAIRSMPTSPTKKASRPPP-----------LARTGSCLSSLSG

AT1G72510.1 Protein of unknown function (DUF1677)1.8e-4153.61Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHM--------EAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKF
        MSA+VLSD  +   T    L++ +        E + V CDCCGLTEECT +YIE VRERY G WICGLCSEA+ YE++R+  L+T EEAM  HMN+C KF
Subjt:  MSATVLSDTILEPQTASTKLIAHM--------EAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKF

Query:  TALKPPPNPTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASR------PPPLARTGSCLSSLS
         +  PPPNPT HLI+AMRQIL++SLDSP R +RSMP SP+K             L+R+ SC +SL+
Subjt:  TALKPPPNPTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASR------PPPLARTGSCLSSLS

AT1G72510.2 Protein of unknown function (DUF1677)1.8e-4153.61Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHM--------EAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKF
        MSA+VLSD  +   T    L++ +        E + V CDCCGLTEECT +YIE VRERY G WICGLCSEA+ YE++R+  L+T EEAM  HMN+C KF
Subjt:  MSATVLSDTILEPQTASTKLIAHM--------EAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKF

Query:  TALKPPPNPTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASR------PPPLARTGSCLSSLS
         +  PPPNPT HLI+AMRQIL++SLDSP R +RSMP SP+K             L+R+ SC +SL+
Subjt:  TALKPPPNPTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASR------PPPLARTGSCLSSLS

AT2G09970.1 Protein of unknown function (DUF1677)5.3e-3347.9Show/hide
Query:  MSATVLSDTILEPQTASTKLIAHM--------EAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDS-LITAEEAMENHMNLCKK
        MS +VLSD  +   T    +I+ +        E + V CDCCGLT+ECT +Y E +RERY G WI G CSEA+ Y+++R+   L T EEAM  HMN C K
Subjt:  MSATVLSDTILEPQTASTKLIAHM--------EAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDS-LITAEEAMENHMNLCKK

Query:  FTALKPPPNPTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASR------PPPLARTGSCLSSLS
        F +  PP N T HLI+AMRQIL++SLDSP R +RSMP SP+K             L+R+ SC +SL+
Subjt:  FTALKPPPNPTVHLITAMRQILKRSLDSPSRAIRSMPTSPTKKASR------PPPLARTGSCLSSLS

AT5G20670.1 Protein of unknown function (DUF1677)3.6e-2139.1Show/hide
Query:  SATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPNP
        S++  +DT  +P   S+ L A    E V CD CG  EECTPAYI RV+ER+ G+W+CGLC+EA+  E++RS + I+ EEA+  H   C +F +  P    
Subjt:  SATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPNP

Query:  TVHLITAMRQILKRSLDSPSRAIRSMPTSP-----TKKASRPPPLARTGSCLSSLS
            I+ + +IL+RSLD   R   +  +S               L R+GSC  SLS
Subjt:  TVHLITAMRQILKRSLDSPSRAIRSMPTSP-----TKKASRPPPLARTGSCLSSLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAACCGTTCTCAGCGATACAATCCTAGAACCTCAAACAGCATCGACGAAGCTAATCGCTCATATGGAGGCGGAGTTCGTCAAATGCGATTGCTGCGGACTTAC
AGAAGAGTGCACACCAGCATACATAGAACGCGTTCGTGAGCGTTACAGTGGAAATTGGATCTGCGGGCTCTGTTCCGAAGCAATCAACTACGAAATCCTCCGTTCCGATA
GCCTAATCACGGCGGAGGAAGCCATGGAAAATCACATGAACCTTTGCAAGAAGTTCACGGCGTTGAAACCACCTCCAAATCCGACGGTGCATTTGATTACGGCGATGCGA
CAGATTCTGAAGCGCAGTTTAGATTCTCCCTCACGGGCTATAAGGTCGATGCCTACAAGTCCGACGAAGAAAGCCTCCCGGCCGCCGCCGCTCGCTCGCACCGGCAGCTG
CTTGTCGTCTCTCTCTGGTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCAACCGTTCTCAGCGATACAATCCTAGAACCTCAAACAGCATCGACGAAGCTAATCGCTCATATGGAGGCGGAGTTCGTCAAATGCGATTGCTGCGGACTTAC
AGAAGAGTGCACACCAGCATACATAGAACGCGTTCGTGAGCGTTACAGTGGAAATTGGATCTGCGGGCTCTGTTCCGAAGCAATCAACTACGAAATCCTCCGTTCCGATA
GCCTAATCACGGCGGAGGAAGCCATGGAAAATCACATGAACCTTTGCAAGAAGTTCACGGCGTTGAAACCACCTCCAAATCCGACGGTGCATTTGATTACGGCGATGCGA
CAGATTCTGAAGCGCAGTTTAGATTCTCCCTCACGGGCTATAAGGTCGATGCCTACAAGTCCGACGAAGAAAGCCTCCCGGCCGCCGCCGCTCGCTCGCACCGGCAGCTG
CTTGTCGTCTCTCTCTGGTTCGTGA
Protein sequenceShow/hide protein sequence
MSATVLSDTILEPQTASTKLIAHMEAEFVKCDCCGLTEECTPAYIERVRERYSGNWICGLCSEAINYEILRSDSLITAEEAMENHMNLCKKFTALKPPPNPTVHLITAMR
QILKRSLDSPSRAIRSMPTSPTKKASRPPPLARTGSCLSSLSGS