; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G029160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G029160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:35397312..35398483
RNA-Seq ExpressionLsi02G029160
SyntenyLsi02G029160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EYU26423.1 hypothetical protein MIMGU_mgv1a0137732mg, partial [Erythranthe guttata]3.6e-0536.67Show/hide
Query:  MEFIFCNFKSALNLAMNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPCILN------GGGGGGGGGIGWNGDS
        ME IF +  S+   AM LSAL+ TSGL Q I       S  S      + S SS SGE+    L  L  L+KSPC +N       GGGGGG GI  +G +
Subjt:  MEFIFCNFKSALNLAMNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPCILN------GGGGGGGGGIGWNGDS

Query:  LPMRVLYSS-------SFKLL----SSEEAVDGGGGSGSGVDCTF------LPFPFLDENRFCRTDGEGSGGGDGGGNDD
        + +   Y +        F +L           GGGG+G G    F      LP PFL+       +G G GGG GG  DD
Subjt:  LPMRVLYSS-------SFKLL----SSEEAVDGGGGSGSGVDCTF------LPFPFLDENRFCRTDGEGSGGGDGGGNDD

RHN76236.1 hypothetical protein MtrunA17_Chr2g0329851 [Medicago truncatula]1.9e-0650.52Show/hide
Query:  MNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPC-------ILNGGGGGGGGGIGWNGDSLPMRVLYSSSF
        M L ALL T GL    G         SP+  G S + SSIS E+    LL+L  L+KSPC       ILNGGGGGGGGGI +NGDSLP+    SSSF
Subjt:  MNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPC-------ILNGGGGGGGGGIGWNGDSLPMRVLYSSSF

TrEMBL top hitse value%identityAlignment
A0A022QGS7 Uncharacterized protein (Fragment)1.8e-0536.67Show/hide
Query:  MEFIFCNFKSALNLAMNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPCILN------GGGGGGGGGIGWNGDS
        ME IF +  S+   AM LSAL+ TSGL Q I       S  S      + S SS SGE+    L  L  L+KSPC +N       GGGGGG GI  +G +
Subjt:  MEFIFCNFKSALNLAMNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPCILN------GGGGGGGGGIGWNGDS

Query:  LPMRVLYSS-------SFKLL----SSEEAVDGGGGSGSGVDCTF------LPFPFLDENRFCRTDGEGSGGGDGGGNDD
        + +   Y +        F +L           GGGG+G G    F      LP PFL+       +G G GGG GG  DD
Subjt:  LPMRVLYSS-------SFKLL----SSEEAVDGGGGSGSGVDCTF------LPFPFLDENRFCRTDGEGSGGGDGGGNDD

A0A0A0K7V2 Uncharacterized protein1.2e-4183.76Show/hide
Query:  MEFIFCNFKSALNLAMNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPCILN-GGGGGGGGGIGWNGDSLPMRV
        MEFIFCNFKSALNLAMN+SALLLTSGLEQNIG V SFTSFLS V GGP  SLSSISGEMALGVLLLLP LSKSPCILN GGGGGGGGGIGW GDS PM V
Subjt:  MEFIFCNFKSALNLAMNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPCILN-GGGGGGGGGIGWNGDSLPMRV

Query:  LYSSSFKLLSSEEAVDG
        LYSSSFKLL+   ++ G
Subjt:  LYSSSFKLLSSEEAVDG

A0A396JD89 Uncharacterized protein9.4e-0750.52Show/hide
Query:  MNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPC-------ILNGGGGGGGGGIGWNGDSLPMRVLYSSSF
        M L ALL T GL    G         SP+  G S + SSIS E+    LL+L  L+KSPC       ILNGGGGGGGGGI +NGDSLP+    SSSF
Subjt:  MNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPC-------ILNGGGGGGGGGIGWNGDSLPMRVLYSSSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCATCTTCTGCAACTTCAAATCGGCTCTGAATCTTGCAATGAACTTATCGGCTTTACTGTTGACATCGGGGCTTGAACAGAACATCGGAGCTGTTGAGTCTTT
CACGAGCTTTCTTTCGCCGGTCGGCGGTGGTCCATCGGTTTCACTCTCGTCCATTTCCGGCGAAATGGCTCTCGGTGTACTGCTATTGCTTCCTACACTGTCAAAGTCTC
CGTGCATTCTGAACGGCGGCGGCGGCGGCGGAGGAGGAGGAATCGGATGGAATGGCGACTCACTGCCAATGCGCGTATTATACTCTTCGTCGTTTAAACTGCTCAGTTCT
GAGGAGGCTGTTGATGGTGGAGGCGGCTCTGGTAGTGGTGTGGACTGCACTTTTTTGCCTTTTCCTTTCTTGGATGAAAATAGATTTTGCAGAACTGATGGCGAGGGAAG
CGGCGGTGGTGATGGCGGCGGTAATGACGATGTTGGATCACTGCGGACCAAATTTCTTTTGAAGCACCACCTCTCTTCTTCTCGTTTTTGTTGCTCTTCTGCTCCGATTC
TCGATAGAACGACGGGGGCGAGAGTGGTGGAAGCTGAATCCGTTGAAAATTTGCGACGTCCGAATCGCCATTTTCGTGCTCTGGAGGCGGAGGGGTTGGAGGCGGTGATG
GAGGTCGCGGAGGAGACACCCGTGGCGGCGGCGGCGGCGGTGGCGGTGGAGAAGGTATCGCCGGTTGTGAATATATATCTTCACGAATCTCAGATCTGTCGAAAACAATA
CTTCGGACATCAGAATCTAGGCGTTCAAGCTCCGGCCGGGTTTCACGACGGCGATGAAGCTGATCGGAGGACGAATATCGATGAT
mRNA sequenceShow/hide mRNA sequence
GTTTATATGGGCTGGGCCTTATCTTGATTTACTTGGGCCTGGGCCTGATGTTCGGCCTAGGTTAGATCTCTTTCTCCCCGTCTTCTCTTTGATGGAATTCATCTTCTGCA
ACTTCAAATCGGCTCTGAATCTTGCAATGAACTTATCGGCTTTACTGTTGACATCGGGGCTTGAACAGAACATCGGAGCTGTTGAGTCTTTCACGAGCTTTCTTTCGCCG
GTCGGCGGTGGTCCATCGGTTTCACTCTCGTCCATTTCCGGCGAAATGGCTCTCGGTGTACTGCTATTGCTTCCTACACTGTCAAAGTCTCCGTGCATTCTGAACGGCGG
CGGCGGCGGCGGAGGAGGAGGAATCGGATGGAATGGCGACTCACTGCCAATGCGCGTATTATACTCTTCGTCGTTTAAACTGCTCAGTTCTGAGGAGGCTGTTGATGGTG
GAGGCGGCTCTGGTAGTGGTGTGGACTGCACTTTTTTGCCTTTTCCTTTCTTGGATGAAAATAGATTTTGCAGAACTGATGGCGAGGGAAGCGGCGGTGGTGATGGCGGC
GGTAATGACGATGTTGGATCACTGCGGACCAAATTTCTTTTGAAGCACCACCTCTCTTCTTCTCGTTTTTGTTGCTCTTCTGCTCCGATTCTCGATAGAACGACGGGGGC
GAGAGTGGTGGAAGCTGAATCCGTTGAAAATTTGCGACGTCCGAATCGCCATTTTCGTGCTCTGGAGGCGGAGGGGTTGGAGGCGGTGATGGAGGTCGCGGAGGAGACAC
CCGTGGCGGCGGCGGCGGCGGTGGCGGTGGAGAAGGTATCGCCGGTTGTGAATATATATCTTCACGAATCTCAGATCTGTCGAAAACAATACTTCGGACATCAGAATCTA
GGCGTTCAAGCTCCGGCCGGGTTTCACGACGGCGATGAAGCTGATCGGAGGACGAATATCGATGAT
Protein sequenceShow/hide protein sequence
MEFIFCNFKSALNLAMNLSALLLTSGLEQNIGAVESFTSFLSPVGGGPSVSLSSISGEMALGVLLLLPTLSKSPCILNGGGGGGGGGIGWNGDSLPMRVLYSSSFKLLSS
EEAVDGGGGSGSGVDCTFLPFPFLDENRFCRTDGEGSGGGDGGGNDDVGSLRTKFLLKHHLSSSRFCCSSAPILDRTTGARVVEAESVENLRRPNRHFRALEAEGLEAVM
EVAEETPVAAAAAVAVEKVSPVVNIYLHESQICRKQYFGHQNLGVQAPAGFHDGDEADRRTNIDD