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Lsi02G029240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G029240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionacidPPc domain-containing protein
Genome locationchr02:35450855..35452162
RNA-Seq ExpressionLsi02G029240
SyntenyLsi02G029240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45517.1 hypothetical protein Csa_016837 [Cucumis sativus]8.8e-3892.31Show/hide
Query:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE KTEIKGSSSE++ KSPNIFERAKEEIEAVIH NKSPRHHKETHGRS+DIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Subjt:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

XP_008462344.1 PREDICTED: uncharacterized protein LOC103500717 [Cucumis melo]7.5e-3791.21Show/hide
Query:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE K EIKGSSSEK+ KSPNIFERAKEEIEAV H NKSPRHHKETHGRS+DIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Subjt:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

XP_022144340.1 uncharacterized protein LOC111014044 isoform X1 [Momordica charantia]1.2e-3485.87Show/hide
Query:  MEERKTEIKGSSSE-KDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE KT IK SSSE KDAK+PN+FERAKEEIEA++HSNKSPRHHKETHGRS+DIDETTP+DEVKAPGVFGRVKEE+EALVG IHPKKDS NH
Subjt:  MEERKTEIKGSSSE-KDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

XP_022144348.1 uncharacterized protein LOC111014044 isoform X2 [Momordica charantia]3.1e-3585.71Show/hide
Query:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE KT IK SSS KDAK+PN+FERAKEEIEA++HSNKSPRHHKETHGRS+DIDETTP+DEVKAPGVFGRVKEE+EALVG IHPKKDS NH
Subjt:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

XP_038900254.1 uncharacterized protein LOC120087339 [Benincasa hispida]1.8e-3894.51Show/hide
Query:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE KTEIK SSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRS+DIDETTPADEVKAPGVFGRVKEEVEAL+GAIHPKKDS NH
Subjt:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

TrEMBL top hitse value%identityAlignment
A0A0A0KAY9 Uncharacterized protein4.3e-3892.31Show/hide
Query:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE KTEIKGSSSE++ KSPNIFERAKEEIEAVIH NKSPRHHKETHGRS+DIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Subjt:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

A0A1S3CGT3 uncharacterized protein LOC1035007173.6e-3791.21Show/hide
Query:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE K EIKGSSSEK+ KSPNIFERAKEEIEAV H NKSPRHHKETHGRS+DIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Subjt:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

A0A5D3BY12 Uncharacterized protein3.6e-3791.21Show/hide
Query:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE K EIKGSSSEK+ KSPNIFERAKEEIEAV H NKSPRHHKETHGRS+DIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Subjt:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

A0A6J1CRC8 uncharacterized protein LOC111014044 isoform X15.8e-3585.87Show/hide
Query:  MEERKTEIKGSSSE-KDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE KT IK SSSE KDAK+PN+FERAKEEIEA++HSNKSPRHHKETHGRS+DIDETTP+DEVKAPGVFGRVKEE+EALVG IHPKKDS NH
Subjt:  MEERKTEIKGSSSE-KDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

A0A6J1CT17 uncharacterized protein LOC111014044 isoform X21.5e-3585.71Show/hide
Query:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH
        MEE KT IK SSS KDAK+PN+FERAKEEIEA++HSNKSPRHHKETHGRS+DIDETTP+DEVKAPGVFGRVKEE+EALVG IHPKKDS NH
Subjt:  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17490.1 unknown protein3.4e-1149.35Show/hide
Query:  SSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDS
        SS  + K+ N+    KEE E++ H        KETHGRS DIDE T  D+VK PGV GR+ EE+EA+V A+ P K S
Subjt:  SSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDS

AT1G72690.1 unknown protein1.5e-1963.29Show/hide
Query:  SSEKDAKSPNIFERAKEEIEAVIHSNKS-PRHH-KETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDS
        S EK  KSPN+FER KEEIEA+ H  KS  RHH KETHG S+DIDE+TP D VK PG F R+KEE+EA+  A+ PK+ S
Subjt:  SSEKDAKSPNIFERAKEEIEAVIHSNKS-PRHH-KETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDS

AT5G57000.1 unknown protein4.1e-1750Show/hide
Query:  KTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPR----HHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKK
        K E K    E   K PN+ ++A+E+++++    K PR    HHKETHGRS+DI E TP DEVKAP V  R KEE+EA++  IH KK
Subjt:  KTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPR----HHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKK

AT5G57000.2 unknown protein1.7e-1550Show/hide
Query:  KTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPR----HHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKK
        K E K S      K PN+ ++A+E+++++    K PR    HHKETHGRS+DI E TP DEVKAP V  R KEE+EA++  IH KK
Subjt:  KTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPR----HHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGCGAAAGACTGAGATCAAAGGTTCTTCCTCAGAAAAAGATGCAAAATCGCCCAATATTTTTGAAAGAGCGAAAGAAGAGATAGAGGCTGTGATCCACTCTAA
TAAATCACCACGGCATCACAAAGAAACGCATGGAAGAAGCAATGATATTGACGAGACTACGCCCGCCGATGAAGTAAAGGCCCCTGGAGTGTTTGGAAGAGTCAAGGAAG
AGGTTGAGGCCCTTGTGGGAGCAATTCATCCCAAGAAGGATTCCGGCAATCATTAG
mRNA sequenceShow/hide mRNA sequence
TCGAAACGTATATACCGTCTTTTAGTTTCGTCGAAAATGGGGAAAGTGACGGTCCAGCGAACGGACACGAGTGAGTGAGACCAGGTAAAGGTTAATCAATCCCGCGGAAA
AGCTCGAATGGAGGAGCGAAAGACTGAGATCAAAGGTTCTTCCTCAGAAAAAGATGCAAAATCGCCCAATATTTTTGAAAGAGCGAAAGAAGAGATAGAGGCTGTGATCC
ACTCTAATAAATCACCACGGCATCACAAAGAAACGCATGGAAGAAGCAATGATATTGACGAGACTACGCCCGCCGATGAAGTAAAGGCCCCTGGAGTGTTTGGAAGAGTC
AAGGAAGAGGTTGAGGCCCTTGTGGGAGCAATTCATCCCAAGAAGGATTCCGGCAATCATTAGTTTTCTTTTAAGCAAGGAAGGGGGTTGACTCCATGCTGTAATAAGGT
TTGCTTTTTTCGATGATTCTTAGTTTCTTTTAAGATGCAACTCCATGCCATCTACCTTGTTATTTGAAAACATTAGCTGGAAAATAACTTGTTTGAAGATTGACATGAAA
ATTAGACTATGTCTGATCTGTCTCGCATACTGTTTAAAGTATGTAATCAATATAGAAACACCATTAAGGTGTTTACATTATATACTTTTGTAGGTACCATTATATATATA
TTGACCAACAAAACCCACATTTCCTA
Protein sequenceShow/hide protein sequence
MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH