; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi02G029430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G029430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:35579133..35582701
RNA-Seq ExpressionLsi02G029430
SyntenyLsi02G029430
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141680.1 uncharacterized protein LOC101218777 isoform X2 [Cucumis sativus]8.0e-7179.59Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMR
        MS+E  PKLYANKP K                ++KQFQE+HK  DASSS+    SS+M+SASSSP PPQPPKESFARRYKFLWPMLLTVNLAVGAY+FMR
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMR

Query:  TKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV
        TKKQDEHVAEEEA PDSAK TKIAAPVVEESLARP +VEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIP++
Subjt:  TKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV

XP_008462358.1 PREDICTED: uncharacterized protein LOC103500733 isoform X1 [Cucumis melo]1.0e-7080.71Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM
        MS+E  PKLYANKP K                ++KQFQEQHK  DASSS+    SSSM+SA SSSP PPQPPKESFARRYKFLWPMLLTVNLAVGAY+FM
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM

Query:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV
        RTKKQDEHVAEEEA PDSAK TKIAAPVVEESLA+P IVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPN+
Subjt:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV

XP_008462359.1 PREDICTED: uncharacterized protein LOC103500733 isoform X2 [Cucumis melo]1.4e-7080.71Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM
        MS+E  PKLYANKP K                ++KQFQEQHK  DASSS+    SSSM+SA SSSP PPQPPKESFARRYKFLWPMLLTVNLAVGAY+FM
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM

Query:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV
        RTKKQDEHVAEEEA PDSAK TKIAAPVVEESLA+P IVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPN+
Subjt:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV

XP_011659646.1 uncharacterized protein LOC101218777 isoform X1 [Cucumis sativus]6.1e-7179.59Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMR
        MS+E  PKLYANKP K                ++KQFQE+HK  DASSS+    SS+M+SASSSP PPQPPKESFARRYKFLWPMLLTVNLAVGAY+FMR
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMR

Query:  TKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV
        TKKQDEHVAEEEA PDSAK TKIAAPVVEESLARP +VEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIP++
Subjt:  TKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV

XP_022992414.1 uncharacterized protein LOC111488728 isoform X1 [Cucurbita maxima]3.6e-7180.1Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSS-----MSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGA
        MS EEPPKLYANKPKK                +VKQFQEQHKV  ASSSSPAPP+SS      SS+SSS S PQPPKESFARRYKFLWPMLLTVNLAVGA
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSS-----MSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGA

Query:  YLFMRTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPN
        YLFMRTKKQDE V EEEA PDSAK  KIAAPVVEES A+P IVEPVKVREPIPVDQQRELFKWILEEKRKIKPKD EEKKRIDEEKAILKEFIRAKSIPN
Subjt:  YLFMRTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPN

Query:  V
        +
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A0A0KAZ6 Uncharacterized protein3.9e-7179.59Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMR
        MS+E  PKLYANKP K                ++KQFQE+HK  DASSS+    SS+M+SASSSP PPQPPKESFARRYKFLWPMLLTVNLAVGAY+FMR
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMR

Query:  TKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV
        TKKQDEHVAEEEA PDSAK TKIAAPVVEESLARP +VEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIP++
Subjt:  TKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV

A0A1S3CGT4 uncharacterized protein LOC103500733 isoform X26.6e-7180.71Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM
        MS+E  PKLYANKP K                ++KQFQEQHK  DASSS+    SSSM+SA SSSP PPQPPKESFARRYKFLWPMLLTVNLAVGAY+FM
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM

Query:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV
        RTKKQDEHVAEEEA PDSAK TKIAAPVVEESLA+P IVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPN+
Subjt:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV

A0A1S3CIB4 uncharacterized protein LOC103500733 isoform X15.1e-7180.71Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM
        MS+E  PKLYANKP K                ++KQFQEQHK  DASSS+    SSSM+SA SSSP PPQPPKESFARRYKFLWPMLLTVNLAVGAY+FM
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM

Query:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV
        RTKKQDEHVAEEEA PDSAK TKIAAPVVEESLA+P IVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPN+
Subjt:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV

A0A6J1JXH4 uncharacterized protein LOC111488728 isoform X11.7e-7180.1Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSS-----MSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGA
        MS EEPPKLYANKPKK                +VKQFQEQHKV  ASSSSPAPP+SS      SS+SSS S PQPPKESFARRYKFLWPMLLTVNLAVGA
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSS-----MSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGA

Query:  YLFMRTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPN
        YLFMRTKKQDE V EEEA PDSAK  KIAAPVVEES A+P IVEPVKVREPIPVDQQRELFKWILEEKRKIKPKD EEKKRIDEEKAILKEFIRAKSIPN
Subjt:  YLFMRTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPN

Query:  V
        +
Subjt:  V

E5GCA6 Uncharacterized protein6.6e-7180.71Show/hide
Query:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM
        MS+E  PKLYANKP K                ++KQFQEQHK  DASSS+    SSSM+SA SSSP PPQPPKESFARRYKFLWPMLLTVNLAVGAY+FM
Subjt:  MSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSA-SSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFM

Query:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV
        RTKKQDEHVAEEEA PDSAK TKIAAPVVEESLA+P IVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPN+
Subjt:  RTKKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55160.1 unknown protein1.3e-3955.1Show/hide
Query:  EEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSP-APPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMRTK
        EE PKL+ NKPKK  I     H        V+       V  +S  SP A  ++S +    S  PP PPKESFARRYK++WP+LLTVNLAVG YLF RTK
Subjt:  EEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSP-APPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMRTK

Query:  KQD-EHVAEEEAGPDSAKITKIAAPV-VEESLARPTIVEPV--KVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIP
        K+D + V EE A    AK + +AAPV VE++L+   + EPV  K REPIP  QQRELFKW+LEEKRK+ PK+ EEKKR DEEKAILK+FI +K+IP
Subjt:  KQD-EHVAEEEAGPDSAKITKIAAPV-VEESLARPTIVEPV--KVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIP

AT1G55160.2 unknown protein4.7e-3765.93Show/hide
Query:  SPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMRTKKQD-EHVAEEEAGPDSAKITKIAAPV-VEESLARPTIVEPV--KVREPIPVDQQRELFKWI
        S  PP PPKESFARRYK++WP+LLTVNLAVG YLF RTKK+D + V EE A    AK + +AAPV VE++L+   + EPV  K REPIP  QQRELFKW+
Subjt:  SPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMRTKKQD-EHVAEEEAGPDSAKITKIAAPV-VEESLARPTIVEPV--KVREPIPVDQQRELFKWI

Query:  LEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIP
        LEEKRK+ PK+ EEKKR DEEKAILK+FI +K+IP
Subjt:  LEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIP

AT1G55160.3 unknown protein1.5e-3548.87Show/hide
Query:  EEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSP-APPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVG--------
        EE PKL+ NKPKK  I     H        V+       V  +S  SP A  ++S +    S  PP PPKESFARRYK++WP+LLTVNLAVG        
Subjt:  EEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSP-APPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVG--------

Query:  -----------------AYLFMRTKKQD-EHVAEEEAGPDSAKITKIAAPV-VEESLARPTIVEPV--KVREPIPVDQQRELFKWILEEKRKIKPKDREE
                         +YLF RTKK+D + V EE A    AK + +AAPV VE++L+   + EPV  K REPIP  QQRELFKW+LEEKRK+ PK+ EE
Subjt:  -----------------AYLFMRTKKQD-EHVAEEEAGPDSAKITKIAAPV-VEESLARPTIVEPV--KVREPIPVDQQRELFKWILEEKRKIKPKDREE

Query:  KKRIDEEKAILKEFIRAKSIP
        KKR DEEKAILK+FI +K+IP
Subjt:  KKRIDEEKAILKEFIRAKSIP

AT2G19530.1 unknown protein4.9e-1838.67Show/hide
Query:  SSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMRTKKQDEHVAE------------------------EEAG---PDSAKITKIAAPVVEE-----
        SSPS  +PP++  ++  K  W   +  NL   AY+F   +++D    E                        E+ G    D AK  + A P  EE     
Subjt:  SSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMRTKKQDEHVAE------------------------EEAG---PDSAKITKIAAPVVEE-----

Query:  --------------SLARPTIVEPVKV-REPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV
                      S+ +    E VKV R+PIP D+Q+ELFKWILEEKRKI+PKDR+EKK+IDEEKAILK+FIRA+ IP +
Subjt:  --------------SLARPTIVEPVKV-REPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGGAATCTCAGACTCGTCGGAAATGAGCAAAGAAGAACCTCCCAAGCTCTACGCCAACAAACCCAAGAAAGGTACCATTCCAAAACTCACAACCCATTTCCCAAT
TCTTCATTCCTTCGAAGTCAAACAATTTCAAGAACAGCACAAAGTCAGCGACGCTTCTTCTTCTTCACCGGCGCCACCATCATCGAGCATGTCATCCGCGTCTTCTTCTC
CTTCACCGCCGCAGCCTCCGAAGGAATCATTTGCAAGGCGATATAAGTTCTTATGGCCCATGCTTTTGACTGTCAACCTTGCTGTTGGAGCTTATCTGTTTATGAGAACA
AAAAAGCAAGATGAACATGTAGCTGAAGAAGAGGCTGGCCCGGATTCAGCCAAAATCACCAAGATTGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAACCATTGT
GGAGCCTGTGAAGGTAAGAGAACCAATTCCGGTGGACCAGCAGCGTGAACTGTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAAGCCAAAGGACCGTGAAGAGAAAA
AACGCATTGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCCGAGCAAAATCTATTCCTAATGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGGAATCTCAGACTCGTCGGAAATGAGCAAAGAAGAACCTCCCAAGCTCTACGCCAACAAACCCAAGAAAGGTACCATTCCAAAACTCACAACCCATTTCCCAAT
TCTTCATTCCTTCGAAGTCAAACAATTTCAAGAACAGCACAAAGTCAGCGACGCTTCTTCTTCTTCACCGGCGCCACCATCATCGAGCATGTCATCCGCGTCTTCTTCTC
CTTCACCGCCGCAGCCTCCGAAGGAATCATTTGCAAGGCGATATAAGTTCTTATGGCCCATGCTTTTGACTGTCAACCTTGCTGTTGGAGCTTATCTGTTTATGAGAACA
AAAAAGCAAGATGAACATGTAGCTGAAGAAGAGGCTGGCCCGGATTCAGCCAAAATCACCAAGATTGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAACCATTGT
GGAGCCTGTGAAGGTAAGAGAACCAATTCCGGTGGACCAGCAGCGTGAACTGTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAAGCCAAAGGACCGTGAAGAGAAAA
AACGCATTGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCCGAGCAAAATCTATTCCTAATGTTTAA
Protein sequenceShow/hide protein sequence
MTGISDSSEMSKEEPPKLYANKPKKGTIPKLTTHFPILHSFEVKQFQEQHKVSDASSSSPAPPSSSMSSASSSPSPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMRT
KKQDEHVAEEEAGPDSAKITKIAAPVVEESLARPTIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNV