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Lsi02G029540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G029540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:35680702..35680953
RNA-Seq ExpressionLsi02G029540
SyntenyLsi02G029540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059447.1 hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa]1.2e-3089.02Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR
        MSVKKSLSLTKAEEAKR+ RH+AARKRRRSFDLCFSYPELPMERGKSLK+M+S KLKTGIKKWAKAVV YARTVS+RFGS R
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR

KAG6575488.1 hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2885.54Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWRH
        MSVKKS SLTKAEEAKR  RHDAARKRRRSFDLCFS PELPME GKSLK+MDS KLK  I+KWAKAVV YARTVSNRFGS RH
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWRH

KAG6593505.1 hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2884.15Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR
        MSVKKSLSLTKAEEAKR  RHDAARKRRRSFDLCFS P+L MERGKSLK+MDS KLK+GI+KWAK+VV YAR VS+RFGSWR
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR

KGN45542.1 hypothetical protein Csa_016865 [Cucumis sativus]2.1e-3087.8Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR
        MSVKKSLSLTKAEEAKR+ RH+AARKRRRSFDLCFSYPE+PMERGKSLK+M+S KLKTGIKKWAKAVV YARTVS+RFGS R
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR

PON96105.1 hypothetical protein TorRG33x02_080350 [Trema orientale]2.4e-1359.76Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR
        MSVKK+LSL + E AK  +       RR  +  CFS+ ELPMERGK+LK+MDS KLK  IK+WAKAVV YAR VS RFG  R
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR

TrEMBL top hitse value%identityAlignment
A0A0A0KB03 Uncharacterized protein1.0e-3087.8Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR
        MSVKKSLSLTKAEEAKR+ RH+AARKRRRSFDLCFSYPE+PMERGKSLK+M+S KLKTGIKKWAKAVV YARTVS+RFGS R
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR

A0A2N9HT47 Uncharacterized protein4.3e-1360.98Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR
        MSVKKSLSL  AE  K     D A++ R  +D CFS+ E+ +E GKSLK+MDS KLK  IK+WAKAVV YAR VS+RFGS R
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR

A0A2P5FE88 Uncharacterized protein1.1e-1359.76Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR
        MSVKK+LSL + E AK  +       RR  +  CFS+ ELPMERGK+LK+MDS KLK  IK+WAKAVV YAR VS RFG  R
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR

A0A5A7UXU0 Uncharacterized protein6.0e-3189.02Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR
        MSVKKSLSLTKAEEAKR+ RH+AARKRRRSFDLCFSYPELPMERGKSLK+M+S KLKTGIKKWAKAVV YARTVS+RFGS R
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR

B9GH52 Uncharacterized protein3.3e-1357.32Show/hide
Query:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR
        MS+KK+LSLT    +K ++    + KRRRS D CFS+ E+ +E GKSLKD+DS K K  IK+WA+AVV YAR VS+RFGS R
Subjt:  MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTAAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCATCGAAAGGCATGATGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTA
CCCAGAGCTACCAATGGAACGTGGAAAGTCTTTGAAAGATATGGATTCAGCAAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCCGTGGTGACTTATGCCCGCACAG
TAAGCAATCGCTTTGGAAGCTGGCGTCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTAAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCATCGAAAGGCATGATGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTA
CCCAGAGCTACCAATGGAACGTGGAAAGTCTTTGAAAGATATGGATTCAGCAAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCCGTGGTGACTTATGCCCGCACAG
TAAGCAATCGCTTTGGAAGCTGGCGTCACTAA
Protein sequenceShow/hide protein sequence
MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWRH