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Lsi02G029710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G029710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cryptdin protein-related .
Genome locationchr02:35801966..35803181
RNA-Seq ExpressionLsi02G029710
SyntenyLsi02G029710
Gene Ontology termsGO:0051301 - cell division (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059464.1 hypothetical protein E6C27_scaffold242G001940 [Cucumis melo var. makuwa]3.5e-2785.71Show/hide
Query:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
        MA  K  ++SVFMTVLVFAM+LSPMTIPTA ATRVLLQQ+NRPPICPACVCCEP PAGSCCRCCA+PIQTSSQNGSP
Subjt:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
KAG6575497.1 hypothetical protein SDJN03_26136, partial [Cucurbita argyrosperma subsp. sororia]5.9e-2785.33Show/hide
Query:  THKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
        THKF+ +S+F+TVLVFAMVLSP TI TA ATRVLLQQ+NRPPICPACVCCEP PAGSCCRCCATPIQTSSQ+GSP
Subjt:  THKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
KGN45568.1 hypothetical protein Csa_016454 [Cucumis sativus]3.1e-2888.31Show/hide
Query:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
        MA  K  L+SVF+TVLVFAMVLSPMT PTA ATRVLLQQINRPPICPACVCCEPPPAGSCCRCCA+PIQTSSQNGSP
Subjt:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
XP_022992462.1 uncharacterized protein LOC111488758 [Cucurbita maxima]3.5e-2786.67Show/hide
Query:  THKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
        TH FS  S+F+TVLVFAMVLSPMTI TA ATR LLQQ+NRPPICPACVCCEP PAGSCCRCCATPIQTSSQNGSP
Subjt:  THKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
XP_038896231.1 uncharacterized protein LOC120084509 [Benincasa hispida]1.1e-2889.61Show/hide
Query:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
        MA+ KFSL+SV MTVLVF MVLSPMTIPTA ATRVLLQQINRPPICPACVCCEP PAGSCCRCCA+PIQTSSQNGSP
Subjt:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
TrEMBL top hitse value%identityAlignment
A0A0A0K7Y9 Uncharacterized protein1.5e-2888.31Show/hide
Query:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
        MA  K  L+SVF+TVLVFAMVLSPMT PTA ATRVLLQQINRPPICPACVCCEPPPAGSCCRCCA+PIQTSSQNGSP
Subjt:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
A0A5A7UWJ7 Uncharacterized protein1.7e-2785.71Show/hide
Query:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
        MA  K  ++SVFMTVLVFAM+LSPMTIPTA ATRVLLQQ+NRPPICPACVCCEP PAGSCCRCCA+PIQTSSQNGSP
Subjt:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
A0A6J1CSH3 uncharacterized protein LOC1110138901.2e-2076.92Show/hide
Query:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCR-CCATPIQTSSQNGSP
        MA  KFSLSS+F+TVLVF MVLSPM I TA ATR+ L Q+ RPPICPACVCC+PPP GSCC+ CCATPI+TSSQNGSP
Subjt:  MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCR-CCATPIQTSSQNGSP
A0A6J1GR88 uncharacterized protein LOC1114563988.4e-2784Show/hide
Query:  THKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
        THKF+ +S+F+TVLVFAMVLSP TI T  ATRVLLQQ+NRPPICPACVCCEP PAGSCCRCCATPIQTSSQ+GSP
Subjt:  THKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
A0A6J1JPW7 uncharacterized protein LOC1114887581.7e-2786.67Show/hide
Query:  THKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
        TH FS  S+F+TVLVFAMVLSPMTI TA ATR LLQQ+NRPPICPACVCCEP PAGSCCRCCATPIQTSSQNGSP
Subjt:  THKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G51913.1 LOCATED IN: endomembrane system7.5e-0442.65Show/hide
Query:  SLSSVFMTVLVFAMVLSPMTIPTAEATRVLL----QQINRPPI----CPACVCCEPPPAGSCCRCCAT
        S S +F++VLV  +V SP      +A RV L      + R P+    CPAC CC P P GSCC C  T
Subjt:  SLSSVFMTVLVFAMVLSPMTIPTAEATRVLL----QQINRPPI----CPACVCCEPPPAGSCCRCCAT
AT1G51920.1 unknown protein2.0e-0948.53Show/hide
Query:  SVFMTVLVFAMVLSPMTIPTAEATRVLLQQI-NRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGS
        S+F+ + V  ++L  + +  + ATR+    I +R PICPACVCCEP P GSCCRCCA+PI T + + S
Subjt:  SVFMTVLVFAMVLSPMTIPTAEATRVLLQQI-NRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACACATAAATTCTCTCTAAGCTCTGTTTTCATGACGGTTCTCGTCTTCGCCATGGTTCTCTCTCCCATGACGATTCCAACCGCCGAAGCTACTCGTGTGCTTTT
GCAGCAAATTAATAGGCCGCCAATATGCCCGGCCTGCGTGTGCTGTGAGCCACCACCGGCGGGATCCTGTTGCCGGTGCTGCGCTACTCCGATTCAGACTTCATCTCAGA
ACGGGTCGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATTATAAATACCAATACATACAGCTTCAAATCTTCACCAATCCAAAATTAAGCTACATACCAATACCCCCATCACTATTATTTCTCCTAAAAAATTCTAGCAATGGCCAC
ACATAAATTCTCTCTAAGCTCTGTTTTCATGACGGTTCTCGTCTTCGCCATGGTTCTCTCTCCCATGACGATTCCAACCGCCGAAGCTACTCGTGTGCTTTTGCAGCAAA
TTAATAGGCCGCCAATATGCCCGGCCTGCGTGTGCTGTGAGCCACCACCGGCGGGATCCTGTTGCCGGTGCTGCGCTACTCCGATTCAGACTTCATCTCAGAACGGGTCG
CCATGAAAAAAACTTGCTGCTCTGTCCATGGCGAGTACATCAAACGATTTGAAGACGATATGCTTTGAGAATAAGGAGAAGACTATCTCCATGCACAAGAAAAAAAGAAA
AGAAAGTAGATTTGTTTTAATTTGGTTAATGTCTGATTAATGTTGTTATATATATGATGTTAATGAAGCCAGTTTGATATTCCAAGTGAAGAATAAATTAACGGAATTAA
ATAA
Protein sequenceShow/hide protein sequence
MATHKFSLSSVFMTVLVFAMVLSPMTIPTAEATRVLLQQINRPPICPACVCCEPPPAGSCCRCCATPIQTSSQNGSP