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Lsi02G030000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G030000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:36091187..36093003
RNA-Seq ExpressionLsi02G030000
SyntenyLsi02G030000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575517.1 hypothetical protein SDJN03_26156, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3771.2Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPP------------PPPPPSLGDIKEERGR
        MAKP N  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+EASL+LIDIVER KPMN++ ERG  P   LPP            PPPPP +GD  EERGR
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPP------------PPPPPSLGDIKEERGR

Query:  CQCSYISTESPNQLQLVKEPLSAPF
        CQCSYI  ESPNQLQL+KEPLSAPF
Subjt:  CQCSYISTESPNQLQLVKEPLSAPF

XP_022954046.1 uncharacterized protein LOC111456424 [Cucurbita moschata]1.2e-3670.49Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEP---------QSSLPPPPPPPSLGDIKEERGRCQC
        MAKP N  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+EASL+LIDIVER KPMN++ ERG  P          S+   PPPPP +GD  EE GRCQC
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEP---------QSSLPPPPPPPSLGDIKEERGRCQC

Query:  SYISTESPNQLQLVKEPLSAPF
        SYI  ESPNQLQL+KEPLSAPF
Subjt:  SYISTESPNQLQLVKEPLSAPF

XP_022992446.1 uncharacterized protein LOC111488747 [Cucurbita maxima]1.2e-3974.8Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGE----PQSSLP------PPPPPPSLGDIKEERGRCQ
        MAKP N  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+EASL+LIDIVER KPMN++ E GGE    P  S P      PPPPPP +GD KEERGRCQ
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGE----PQSSLP------PPPPPPSLGDIKEERGRCQ

Query:  CSYISTESPNQLQLVKEPLSAPF
        CSYI  ESPNQLQL+KEPLSAPF
Subjt:  CSYISTESPNQLQLVKEPLSAPF

XP_023521779.1 uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo]1.5e-3975.21Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERG--------GEPQSSLPPPPPPPSLGDIKEERGRCQCS
        MAKP N  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+EASL+LIDIVER KPMN+M ERG          P SS   PP PP +GD KEERGRCQCS
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERG--------GEPQSSLPPPPPPPSLGDIKEERGRCQCS

Query:  YISTESPNQLQLVKEPLSAPF
        YIS ESPNQLQL+KEPLSAPF
Subjt:  YISTESPNQLQLVKEPLSAPF

XP_038898732.1 uncharacterized protein LOC120086256 [Benincasa hispida]5.8e-4789.38Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPPPPPPPSLGDIKEERGRCQCSYISTESPN
        MAKP NVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFK MNYM E  G+ Q SLPPPP  PSLGDIKEERGRCQC Y+STESPN
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPPPPPPPSLGDIKEERGRCQCSYISTESPN

Query:  QLQLVKEPLSAPF
        QLQLVKEPLSAPF
Subjt:  QLQLVKEPLSAPF

TrEMBL top hitse value%identityAlignment
A0A0A0K9S8 Uncharacterized protein2.0e-2967.83Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPPPPPPPSLGDIKEERGRCQCSYIST-ESP
        MAKP NVCCSIELEPKTLNQGQLH+AREVAADVVQKLE SEA+LVLID+VER +PM  M   GG             SL + +EER RCQCSY+ST +SP
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPPPPPPPSLGDIKEERGRCQCSYIST-ESP

Query:  NQ-LQLVKEPLSAPF
        N+ L+L+KEPLSAPF
Subjt:  NQ-LQLVKEPLSAPF

A0A1S3CH00 uncharacterized protein LOC1035007901.4e-3574.79Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHER----GGEPQSSLPPPPPPPSLGDIKEERGRCQCSYIST
        MAKP NVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLID+VER KPM YM ER    GGE +S         SLG+ +EER RCQCSY+ST
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHER----GGEPQSSLPPPPPPPSLGDIKEERGRCQCSYIST

Query:  -ESPNQ-LQLVKEPLSAPF
         +SPN+ LQL+KEPLSAPF
Subjt:  -ESPNQ-LQLVKEPLSAPF

A0A6J1DD75 uncharacterized protein LOC1110199603.2e-2763.72Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPPPPPPPSLGDIKEERGRCQCSYISTESPN
        MAK   +CCSIELEPKTLN GQL++AREVAADVVQKLEP EAS V ID+VERFK +N   E G           P   L D  E R RCQCS + TESPN
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPPPPPPPSLGDIKEERGRCQCSYISTESPN

Query:  QLQLVKEPLSAPF
        Q+QL+KEPLSAPF
Subjt:  QLQLVKEPLSAPF

A0A6J1GPS6 uncharacterized protein LOC1114564245.9e-3770.49Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEP---------QSSLPPPPPPPSLGDIKEERGRCQC
        MAKP N  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+EASL+LIDIVER KPMN++ ERG  P          S+   PPPPP +GD  EE GRCQC
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEP---------QSSLPPPPPPPSLGDIKEERGRCQC

Query:  SYISTESPNQLQLVKEPLSAPF
        SYI  ESPNQLQL+KEPLSAPF
Subjt:  SYISTESPNQLQLVKEPLSAPF

A0A6J1JTK7 uncharacterized protein LOC1114887475.7e-4074.8Show/hide
Query:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGE----PQSSLP------PPPPPPSLGDIKEERGRCQ
        MAKP N  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+EASL+LIDIVER KPMN++ E GGE    P  S P      PPPPPP +GD KEERGRCQ
Subjt:  MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGE----PQSSLP------PPPPPPSLGDIKEERGRCQ

Query:  CSYISTESPNQLQLVKEPLSAPF
        CSYI  ESPNQLQL+KEPLSAPF
Subjt:  CSYISTESPNQLQLVKEPLSAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGCCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACT
GGAACCCAGCGAAGCCTCTCTTGTATTGATTGATATCGTGGAAAGATTCAAACCGATGAACTATATGCATGAAAGAGGAGGAGAACCACAATCGTCACTGCCACCCCCAC
CGCCACCGCCGTCATTGGGAGATATTAAGGAAGAAAGAGGAAGATGTCAGTGCTCTTACATTTCTACTGAATCCCCAAATCAACTGCAGTTGGTCAAGGAACCCCTTTCA
GCTCCATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGCCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACT
GGAACCCAGCGAAGCCTCTCTTGTATTGATTGATATCGTGGAAAGATTCAAACCGATGAACTATATGCATGAAAGAGGAGGAGAACCACAATCGTCACTGCCACCCCCAC
CGCCACCGCCGTCATTGGGAGATATTAAGGAAGAAAGAGGAAGATGTCAGTGCTCTTACATTTCTACTGAATCCCCAAATCAACTGCAGTTGGTCAAGGAACCCCTTTCA
GCTCCATTTTGA
Protein sequenceShow/hide protein sequence
MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPPPPPPPSLGDIKEERGRCQCSYISTESPNQLQLVKEPLS
APF