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Lsi02G030010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi02G030010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr02:36098732..36099144
RNA-Seq ExpressionLsi02G030010
SyntenyLsi02G030010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653186.1 hypothetical protein Csa_020019 [Cucumis sativus]9.6e-1349.15Show/hide
Query:  FHLYED--YSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLEIV-------------TTPTTAYRRRKPESQENYIKGE-------------QENDGEKI-
        FHLYED  YS PNPKL HFQLQ SSLVVFDEK+ETP EKLE V             TTP   Y RRK E  +  +  E              +N+G+++ 
Subjt:  FHLYED--YSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLEIV-------------TTPTTAYRRRKPESQENYIKGE-------------QENDGEKI-

Query:  --RKCKKMTDEELNRRVE
           +  KMTDEELNRRVE
Subjt:  --RKCKKMTDEELNRRVE

KAG6583897.1 hypothetical protein SDJN03_19829, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0842.34Show/hide
Query:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYI-------------KGEQENDGEKIRKCKK
        HLYE YS PNPK+ HFQ Q SS VVFDEK+E P   L+            + TTP   YRR K E  +  +              G+ E    +  +  K
Subjt:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYI-------------KGEQENDGEKIRKCKK

Query:  MTDEELNRRVE
        MTDEELNRRVE
Subjt:  MTDEELNRRVE

XP_022927149.1 uncharacterized protein LOC111434084 [Cucurbita moschata]1.9e-0842.34Show/hide
Query:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYI-------------KGEQENDGEKIRKCKK
        HLYE YS PNPK+ HFQ Q SS VVFDEK+E P   L+            + TTP   YRR K E  +  +              G+ E    +  +  K
Subjt:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYI-------------KGEQENDGEKIRKCKK

Query:  MTDEELNRRVE
        MTDEELNRRVE
Subjt:  MTDEELNRRVE

XP_023520225.1 uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo]1.6e-0741.44Show/hide
Query:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYIKGEQENDGEK-------------IRKCKK
        HLYE YS PNPK+ HFQ Q SS VVFDEK+E P   L             + TTP   Y R K E  +  +  E +    K               +  K
Subjt:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYIKGEQENDGEK-------------IRKCKK

Query:  MTDEELNRRVE
        MTDEELNRRVE
Subjt:  MTDEELNRRVE

XP_038877172.1 uncharacterized protein LOC120069472 [Benincasa hispida]2.0e-1046.85Show/hide
Query:  FHLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLEIVT-----------TPTTAYRRRKPESQENYIKGEQE----NDGEKIR---------KCKK
        FHLYED+S  NPKL HF+L  SSLVVFDEKKET  EKLE+V            TP    RRRK E  +  +  E         E ++         + +K
Subjt:  FHLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLEIVT-----------TPTTAYRRRKPESQENYIKGEQE----NDGEKIR---------KCKK

Query:  MTDEELNRRVE
        MTDEELNRRVE
Subjt:  MTDEELNRRVE

TrEMBL top hitse value%identityAlignment
A0A0A0M033 Uncharacterized protein4.7e-1349.15Show/hide
Query:  FHLYED--YSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLEIV-------------TTPTTAYRRRKPESQENYIKGE-------------QENDGEKI-
        FHLYED  YS PNPKL HFQLQ SSLVVFDEK+ETP EKLE V             TTP   Y RRK E  +  +  E              +N+G+++ 
Subjt:  FHLYED--YSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLEIV-------------TTPTTAYRRRKPESQENYIKGE-------------QENDGEKI-

Query:  --RKCKKMTDEELNRRVE
           +  KMTDEELNRRVE
Subjt:  --RKCKKMTDEELNRRVE

A0A6J1EH73 uncharacterized protein LOC1114340849.1e-0942.34Show/hide
Query:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYI-------------KGEQENDGEKIRKCKK
        HLYE YS PNPK+ HFQ Q SS VVFDEK+E P   L+            + TTP   YRR K E  +  +              G+ E    +  +  K
Subjt:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYI-------------KGEQENDGEKIRKCKK

Query:  MTDEELNRRVE
        MTDEELNRRVE
Subjt:  MTDEELNRRVE

A0A6J1KGM0 uncharacterized protein LOC1114955931.3e-0739.64Show/hide
Query:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYIKGEQEN-----------DGEKI--RKCKK
        H YE YS PNPK+ HFQ Q SS VVF+EK+E P   L+            + TTP   Y+R K E  +  +  E +            +G+++   +  K
Subjt:  HLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLE------------IVTTPTTAYRRRKPESQENYIKGEQEN-----------DGEKI--RKCKK

Query:  MTDEELNRRVE
        MTDEELNRRVE
Subjt:  MTDEELNRRVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTCCATCTTTATGAAGATTACTCATTACCAAACCCAAAGTTAATTCATTTTCAACTTCAAAGGTCTTCATTGGTAGTATTTGATGAAAAGAAGGAAACTCCATA
TGAGAAATTGGAAATTGTGACGACTCCGACGACTGCTTATCGACGGAGGAAGCCGGAGAGCCAAGAGAATTATATCAAAGGAGAGCAAGAAAATGATGGGGAAAAGATCA
GAAAGTGCAAAAAGATGACAGATGAAGAATTGAACAGAAGAGTGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTCCATCTTTATGAAGATTACTCATTACCAAACCCAAAGTTAATTCATTTTCAACTTCAAAGGTCTTCATTGGTAGTATTTGATGAAAAGAAGGAAACTCCATA
TGAGAAATTGGAAATTGTGACGACTCCGACGACTGCTTATCGACGGAGGAAGCCGGAGAGCCAAGAGAATTATATCAAAGGAGAGCAAGAAAATGATGGGGAAAAGATCA
GAAAGTGCAAAAAGATGACAGATGAAGAATTGAACAGAAGAGTGGAGTAG
Protein sequenceShow/hide protein sequence
MVFHLYEDYSLPNPKLIHFQLQRSSLVVFDEKKETPYEKLEIVTTPTTAYRRRKPESQENYIKGEQENDGEKIRKCKKMTDEELNRRVE