; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G000010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G000010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr03:5743..10579
RNA-Seq ExpressionLsi03G000010
SyntenyLsi03G000010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147283.1 uncharacterized protein LOC101218484 [Cucumis sativus]3.7e-7995.12Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
        MELTLP PLF+S PKIVR+SKPNN+GLCLLDSNPLSA++KLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGL
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL

Query:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Subjt:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

XP_008463206.1 PREDICTED: uncharacterized protein LOC103501412 isoform X1 [Cucumis melo]3.0e-7690.59Show/hide
Query:  MELTLPAPLFLSFPK------IVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCED
        MELTLP PLF+S PK      +VR SKPNNHGLCLL+S PLSA++KLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCED
Subjt:  MELTLPAPLFLSFPK------IVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCED

Query:  CGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Subjt:  CGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

XP_008463215.1 PREDICTED: uncharacterized protein LOC103501412 isoform X2 [Cucumis melo]2.4e-7894.51Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
        MELTLP PLF+S PKIVR SKPNNHGLCLL+S PLSA++KLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL

Query:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Subjt:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

XP_022998903.1 uncharacterized protein LOC111493423 [Cucurbita maxima]4.0e-7389.63Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
        MELTLP PLF S  KI+RD KP NHGL L DSNP+SA+LKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEA E+PL  CEDCGGSGL
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL

Query:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT NS
Subjt:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

XP_038893788.1 uncharacterized protein LOC120082609 [Benincasa hispida]9.2e-7893.29Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
        MEL LP PLF +FPKI+RD KPNNHGLCLLDSN LSA++KLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDS+AVEVPLITCEDCGGSGL
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL

Query:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CSECKGEGFVLKKLSDE+AERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Subjt:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

TrEMBL top hitse value%identityAlignment
A0A0A0LVE3 Uncharacterized protein1.8e-7995.12Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
        MELTLP PLF+S PKIVR+SKPNN+GLCLLDSNPLSA++KLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGL
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL

Query:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Subjt:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

A0A1S3CIP4 uncharacterized protein LOC103501412 isoform X21.2e-7894.51Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
        MELTLP PLF+S PKIVR SKPNNHGLCLL+S PLSA++KLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL

Query:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Subjt:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

A0A1S3CJ25 uncharacterized protein LOC103501412 isoform X11.4e-7690.59Show/hide
Query:  MELTLPAPLFLSFPK------IVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCED
        MELTLP PLF+S PK      +VR SKPNNHGLCLL+S PLSA++KLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCED
Subjt:  MELTLPAPLFLSFPK------IVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCED

Query:  CGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Subjt:  CGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

A0A6J1G9T1 uncharacterized protein LOC1114521091.1e-7188.41Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
        MELTLP PLF S  KI+RD K  NHGL LLD+NP+SA+LKLQGGRRTL IASSLPETAASVAIAATVVGAAATFLSRRNKDSEA E+PL  CEDCGGSGL
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL

Query:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT NS
Subjt:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

A0A6J1KI37 uncharacterized protein LOC1114934231.9e-7389.63Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL
        MELTLP PLF S  KI+RD KP NHGL L DSNP+SA+LKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEA E+PL  CEDCGGSGL
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGL

Query:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
        CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT NS
Subjt:  CSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G45050.1 unknown protein1.2e-2755.8Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGG
        MEL+L      SFP  V   K         D   L+ +LK   Q  +R+ T+  +L ETA S+AIAATVVG AAT L RR NK SE  E  +  CE C G
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGG

Query:  SGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTA
        SG+C ECKGEGFVLKKLSD NAE+ARLAAKNMATR+TA
Subjt:  SGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTA

AT3G45050.2 unknown protein2.8e-4059.51Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGG
        MEL+L      SFP  V   K         D   L+ +LK   Q  +R+ T+  +L ETA S+AIAATVVG AAT L RR NK SE  E  +  CE C G
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGG

Query:  SGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG
        SG+C ECKGEGFVLKKLSD NAE+ARLAAKNMATR+TA LPKKWSYC+KCSS RSC  CGGSG
Subjt:  SGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG

AT3G45050.3 unknown protein2.8e-4059.51Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGG
        MEL+L      SFP  V   K         D   L+ +LK   Q  +R+ T+  +L ETA S+AIAATVVG AAT L RR NK SE  E  +  CE C G
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGG

Query:  SGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG
        SG+C ECKGEGFVLKKLSD NAE+ARLAAKNMATR+TA LPKKWSYC+KCSS RSC  CGGSG
Subjt:  SGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG

AT3G45050.4 unknown protein2.8e-4059.51Show/hide
Query:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGG
        MEL+L      SFP  V   K         D   L+ +LK   Q  +R+ T+  +L ETA S+AIAATVVG AAT L RR NK SE  E  +  CE C G
Subjt:  MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGG

Query:  SGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG
        SG+C ECKGEGFVLKKLSD NAE+ARLAAKNMATR+TA LPKKWSYC+KCSS RSC  CGGSG
Subjt:  SGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTACTCTGCCTGCCCCCTTGTTTCTCTCCTTCCCTAAGATCGTTAGGGATTCTAAACCCAACAACCATGGCCTTTGCTTATTGGACTCCAATCCTCTTTCAGC
TGAATTGAAACTACAAGGTGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCCGAAACAGCAGCTTCTGTGGCTATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCT
TCCTTTCCAGAAGAAACAAAGATTCTGAGGCAGTGGAGGTTCCTTTGATAACATGTGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTG
CTTAAGAAACTGTCAGATGAAAATGCAGAGAGGGCGAGGCTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTG
CTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAGTGTGTAGAATGCAGTTGATAAACGGTCTCTGCCGCTGCCTTGCAAATATCTCTCTGGAAGATAAGGGACCCAAGAACTTGGGAACGCCAAGCAGGTAGACA
CTGGAAGTCTGGAAGTTGTTTCCCAATGGAGCTTACTCTGCCTGCCCCCTTGTTTCTCTCCTTCCCTAAGATCGTTAGGGATTCTAAACCCAACAACCATGGCCTTTGCT
TATTGGACTCCAATCCTCTTTCAGCTGAATTGAAACTACAAGGTGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCCGAAACAGCAGCTTCTGTGGCTATTGCTGCT
ACAGTTGTAGGTGCAGCAGCCACCTTCCTTTCCAGAAGAAACAAAGATTCTGAGGCAGTGGAGGTTCCTTTGATAACATGTGAAGATTGTGGTGGTTCAGGCTTATGTTC
TGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGAGGGCGAGGCTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGCTTCCTA
AAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAGTCAGAAATTCTAATAAAGAGATGAAATCTT
TACAGACGTACATGAGAGTTAAGACCACAAACTGCTGGTTTTATTGTTTAGAGGAAATTTGACTTTATCCTTTTATGAGCTTGCTGGATCAGTTTCTAGTCAAAAGTATT
GTAAATATTAGCATGATAATGTATTTTAAATTTTACATGTATTGAGCTCTCGAGAAAGTATCAAAACTCTTTCATCTTTTCTTTTCTTTTTTCTCTGGAGTGAAAACTAG
GTCATGTTTTATTCTTTCCTAGTACAACAATATCCAGAGATGGAAGCTTTAACCTCTAGAGAAGAAAATCATACCAATTACCGTTG
Protein sequenceShow/hide protein sequence
MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFV
LKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS