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Lsi03G000470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G000470
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionhomeobox-leucine zipper protein REVOLUTA-like
Genome locationchr03:752550..753341
RNA-Seq ExpressionLsi03G000470
SyntenyLsi03G000470
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR013978 - MEKHLA
IPR044830 - Class III homeodomain-leucine zipper family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041695.1 homeobox-leucine zipper protein REVOLUTA-like [Cucumis melo var. makuwa]1.7e-1392Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI
        MFANQAGLDMLETTLVALQDITLDKIF DSARKAFSAVFSSLMNQ   YI
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI

KAF2284647.1 hypothetical protein GH714_028797 [Hevea brasiliensis]8.8e-1550.94Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYILPFSSSSCLTSREWALLTFLLEFACQQWDDMLPLNKLLHGKSLQKMSLPC
        +FANQAGLDMLETTLVALQDITLDKIF +S RKA  A F+ LM++ ++                   T  +E AC+QW  M  ++KLLHGKSL +M    
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYILPFSSSSCLTSREWALLTFLLEFACQQWDDMLPLNKLLHGKSLQKMSLPC

Query:  TASPSP
         A PSP
Subjt:  TASPSP

KAF2321760.1 hypothetical protein GH714_002519 [Hevea brasiliensis]8.8e-1550.94Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYILPFSSSSCLTSREWALLTFLLEFACQQWDDMLPLNKLLHGKSLQKMSLPC
        +FANQAGLDMLETTLVALQDITLDKIF +S RKA  A F+ LM++ ++                   T  +E AC+QW  M  ++KLLHGKSL +M    
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYILPFSSSSCLTSREWALLTFLLEFACQQWDDMLPLNKLLHGKSLQKMSLPC

Query:  TASPSP
         A PSP
Subjt:  TASPSP

XP_038894235.1 homeobox-leucine zipper protein REVOLUTA-like isoform X1 [Benincasa hispida]3.3e-1494Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI
        MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ   YI
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI

XP_038894236.1 homeobox-leucine zipper protein REVOLUTA-like isoform X2 [Benincasa hispida]3.3e-1494Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI
        MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ   YI
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI

TrEMBL top hitse value%identityAlignment
A0A1S3CHC5 homeobox-leucine zipper protein REVOLUTA-like8.0e-1492Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI
        MFANQAGLDMLETTLVALQDITLDKIF DSARKAFSAVFSSLMNQ   YI
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI

A0A5A7TJT3 Homeobox-leucine zipper protein REVOLUTA-like8.0e-1492Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI
        MFANQAGLDMLETTLVALQDITLDKIF DSARKAFSAVFSSLMNQ   YI
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI

A0A5D3C3C5 Homeobox-leucine zipper protein REVOLUTA-like8.0e-1492Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI
        MFANQAGLDMLETTLVALQDITLDKIF DSARKAFSAVFSSLMNQ   YI
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI

A0A6A6K7E6 Uncharacterized protein4.3e-1550.94Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYILPFSSSSCLTSREWALLTFLLEFACQQWDDMLPLNKLLHGKSLQKMSLPC
        +FANQAGLDMLETTLVALQDITLDKIF +S RKA  A F+ LM++ ++                   T  +E AC+QW  M  ++KLLHGKSL +M    
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYILPFSSSSCLTSREWALLTFLLEFACQQWDDMLPLNKLLHGKSLQKMSLPC

Query:  TASPSP
         A PSP
Subjt:  TASPSP

A0A6A6N7X9 Uncharacterized protein4.3e-1550.94Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYILPFSSSSCLTSREWALLTFLLEFACQQWDDMLPLNKLLHGKSLQKMSLPC
        +FANQAGLDMLETTLVALQDITLDKIF +S RKA  A F+ LM++ ++                   T  +E AC+QW  M  ++KLLHGKSL +M    
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYILPFSSSSCLTSREWALLTFLLEFACQQWDDMLPLNKLLHGKSLQKMSLPC

Query:  TASPSP
         A PSP
Subjt:  TASPSP

SwissProt top hitse value%identityAlignment
A2XK30 Homeobox-leucine zipper protein HOX321.7e-0861.22Show/hide
Query:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI
        FANQAGLDMLETTL+ALQDI+L+KI  D  RKA    F  +M Q   Y+
Subjt:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI

O04292 Homeobox-leucine zipper protein ATHB-91.3e-0868.18Show/hide
Query:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ
        FANQAGLDMLETTLVALQDI LDK   DS R+A  + F+ +M Q
Subjt:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ

Q6AST1 Homeobox-leucine zipper protein HOX321.7e-0861.22Show/hide
Query:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI
        FANQAGLDMLETTL+ALQDI+L+KI  D  RKA    F  +M Q   Y+
Subjt:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYI

Q9SE43 Homeobox-leucine zipper protein REVOLUTA1.4e-1075.56Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ
        MFANQAGLDMLETTLVALQDITL+KIF +S RKA  + F+ LM Q
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ

Q9ZU11 Homeobox-leucine zipper protein ATHB-155.7e-0968.18Show/hide
Query:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ
        FANQAGLDMLETTLVALQDI+L+KIF D+ RK   + F  +M Q
Subjt:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ

Arabidopsis top hitse value%identityAlignment
AT1G30490.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein9.1e-1068.18Show/hide
Query:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ
        FANQAGLDMLETTLVALQDI LDK   DS R+A  + F+ +M Q
Subjt:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ

AT1G52150.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein4.1e-1068.18Show/hide
Query:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ
        FANQAGLDMLETTLVALQDI+L+KIF D+ RK   + F  +M Q
Subjt:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ

AT1G52150.2 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein4.1e-1068.18Show/hide
Query:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ
        FANQAGLDMLETTLVALQDI+L+KIF D+ RK   + F  +M Q
Subjt:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ

AT1G52150.3 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein1.4e-1068.89Show/hide
Query:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQV
        FANQAGLDMLETTLVALQDI+L+KIF D+ RK   + F  +M QV
Subjt:  FANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQV

AT5G60690.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein9.7e-1275.56Show/hide
Query:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ
        MFANQAGLDMLETTLVALQDITL+KIF +S RKA  + F+ LM Q
Subjt:  MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCAAACCAAGCAGGCCTTGACATGTTGGAGACAACCTTGGTTGCCTTACAAGACATCACTTTGGATAAAATTTTTGGCGATTCGGCTCGCAAGGCTTTC
TCTGCTGTTTTTTCCAGCTTAATGAACCAGGTTACCTACTATATTCTCCCTTTCAGTTCGTCGTCGTGCTTGACTAGTCGTGAATGGGCTTTGCTTACATTCCTG
CTGGAATTTGCATGTCAACAATGGGACGACATGCTTCCTTTGAACAAGCTGTTGCATGGAAAGTCCTTGCAGAAGATGAGTCTACCGTGCACTGCCTCGCCTTCT
CCTTCGTTAACTGGTCGTTCCTTTGATTCTTTTCCCTGTACACTTGTTGAAACTAACGCAAACAGTCCAAGAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCAAACCAAGCAGGCCTTGACATGTTGGAGACAACCTTGGTTGCCTTACAAGACATCACTTTGGATAAAATTTTTGGCGATTCGGCTCGCAAGGCTTTC
TCTGCTGTTTTTTCCAGCTTAATGAACCAGGTTACCTACTATATTCTCCCTTTCAGTTCGTCGTCGTGCTTGACTAGTCGTGAATGGGCTTTGCTTACATTCCTG
CTGGAATTTGCATGTCAACAATGGGACGACATGCTTCCTTTGAACAAGCTGTTGCATGGAAAGTCCTTGCAGAAGATGAGTCTACCGTGCACTGCCTCGCCTTCT
CCTTCGTTAACTGGTCGTTCCTTTGATTCTTTTCCCTGTACACTTGTTGAAACTAACGCAAACAGTCCAAGAAAATAGGAAGGTTTTCTACAATTTTGTAACATC
TTATATATATATCAGCCTCAAGTTTGAATTATAAGGATGTATCTGGCAGGGGAAATTTTCTGATGATGTCAAATTCTTTTGTTGAATGATAAGAATGGAAAATGT
GTTGCATTACTGAAACCAAAACCCGAAGTAAATTTACAATATGTTAACAGTTTGTACGTGATGGATTGCCATCAGGTTGTTTGCAATAACGATCAAGCGATGAAC
TGACTTCCAAATCAAACCACCCATATTTATCACCTCAACTGCAAATTCTACACTAGTATTACAAGATTCAATTTCAG
Protein sequenceShow/hide protein sequence
MFANQAGLDMLETTLVALQDITLDKIFGDSARKAFSAVFSSLMNQVTYYILPFSSSSCLTSREWALLTFLLEFACQQWDDMLPLNKLLHGKSLQKMSLPCTASPS
PSLTGRSFDSFPCTLVETNANSPRK