; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G000620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G000620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLEA_2 domain-containing protein
Genome locationchr03:911014..911517
RNA-Seq ExpressionLsi03G000620
SyntenyLsi03G000620
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652784.1 hypothetical protein Csa_022865 [Cucumis sativus]5.6e-4675.91Show/hide
Query:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL
        KRT+LIR++GRSLL VIFLV L ++ICWLVV PK+PRLIVETGKVIAH SST +MLNATIAFT KSYNPNKRASIHM  M+MIV +MG  F S IP+FTL
Subjt:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL

Query:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVR
        TP NQTV SSA +V FEYPFGY EEI+PEL+FSA+VR
Subjt:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVR

XP_008462337.1 PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]2.4e-4969.46Show/hide
Query:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRSI TT+GE   +SSS++SS  Q +   T K+T++IRIIGR LL VIFLVGLA+VICWLVVFPK PR +VETGKVIAH +STHNMLNATIAFT K YNP
Subjt:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV
        NKRASIH+ SM+MI+TSMGQ F S +P F  TPGNQTV S A +V F+YPFG+REEI+PEL FSA++
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV

XP_011648454.1 uncharacterized protein LOC105434469 [Cucumis sativus]1.8e-4970.06Show/hide
Query:  MRSITT-QGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRS TT +GE   +SSSK+SS  Q +   T K+T++IRIIGRSLL VIFLVGLA+VICWLVVFPK PR+ VETG+VIAH +STHNMLNATI FT K YNP
Subjt:  MRSITT-QGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV
        NKRAS+H+ SM+MIVTSMGQ F S IPTF  TPGNQTV S A EV F+YPFG++EEI+PEL FSA++
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV

XP_011654126.1 NDR1/HIN1-like protein 10 isoform X1 [Cucumis sativus]5.6e-4675.91Show/hide
Query:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL
        KRT+LIR++GRSLL VIFLV L ++ICWLVV PK+PRLIVETGKVIAH SST +MLNATIAFT KSYNPNKRASIHM  M+MIV +MG  F S IP+FTL
Subjt:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL

Query:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVR
        TP NQTV SSA +V FEYPFGY EEI+PEL+FSA+VR
Subjt:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVR

XP_038895359.1 NDR1/HIN1-like protein 10 [Benincasa hispida]2.0e-5677.71Show/hide
Query:  MRSITTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPN
        MRS  TQGET SS SSKQSSYRQQ    TAKRT++IRIIGRSLL VIFLVGLAI+ICWLVV PKTPRLIVETG VI H SSTHNML ATI FTF+SYNPN
Subjt:  MRSITTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPN

Query:  KRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV
        KRA+IHM SM+MIV S+G+ F S IP+FTLTP NQTV SSA  V FEYPFG+ EEIDPELRFSA+V
Subjt:  KRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV

TrEMBL top hitse value%identityAlignment
A0A0A0LVK9 LEA_2 domain-containing protein8.9e-5070.06Show/hide
Query:  MRSITT-QGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRS TT +GE   +SSSK+SS  Q +   T K+T++IRIIGRSLL VIFLVGLA+VICWLVVFPK PR+ VETG+VIAH +STHNMLNATI FT K YNP
Subjt:  MRSITT-QGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV
        NKRAS+H+ SM+MIVTSMGQ F S IPTF  TPGNQTV S A EV F+YPFG++EEI+PEL FSA++
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV

A0A0A0LY09 Uncharacterized protein1.0e-4575.74Show/hide
Query:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL
        KRT+LIR++GRSLL VIFLV L ++ICWLVV PK+PRLIVETGKVIAH SST +MLNATIAFT KSYNPNKRASIHM  M+MIV +MG  F S IP+FTL
Subjt:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL

Query:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV
        TP NQTV SSA +V FEYPFGY EEI+PEL+FSA+V
Subjt:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV

A0A1S3CGR5 NDR1/HIN1-like protein 121.2e-4969.46Show/hide
Query:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRSI TT+GE   +SSS++SS  Q +   T K+T++IRIIGR LL VIFLVGLA+VICWLVVFPK PR +VETGKVIAH +STHNMLNATIAFT K YNP
Subjt:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV
        NKRASIH+ SM+MI+TSMGQ F S +P F  TPGNQTV S A +V F+YPFG+REEI+PEL FSA++
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV

A0A5A7TF76 NDR1/HIN1-like protein 121.2e-4969.46Show/hide
Query:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP
        MRSI TT+GE   +SSS++SS  Q +   T K+T++IRIIGR LL VIFLVGLA+VICWLVVFPK PR +VETGKVIAH +STHNMLNATIAFT K YNP
Subjt:  MRSI-TTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNP

Query:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV
        NKRASIH+ SM+MI+TSMGQ F S +P F  TPGNQTV S A +V F+YPFG+REEI+PEL FSA++
Subjt:  NKRASIHMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADV

A0A5A7TG86 Protein YLS9-like2.3e-4574.45Show/hide
Query:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL
        KRT+LIR++GRSLL VIFLV L ++ICWLVV PKTPRLIVETGKV+ H SST +MLNATIAFT KSYNPNKRASIHM  M+MIV +MG  F S IP+FTL
Subjt:  KRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSPIPTFTL

Query:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVR
        TP NQTV  SA +V FEYPFGY EEI+PEL+FSA+VR
Subjt:  TPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVR

SwissProt top hitse value%identityAlignment
Q9SRN0 NDR1/HIN1-like protein 19.3e-0431.58Show/hide
Query:  RTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTH--NMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSP
        R KLIR I  S++ V+F++ L I++ W ++ P  PR I++   V A   S +  N+L +    T  S NPN +  I+   + +  T   Q    P
Subjt:  RTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTH--NMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSP

Arabidopsis top hitse value%identityAlignment
AT3G11660.1 NDR1/HIN1-like 16.6e-0531.58Show/hide
Query:  RTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTH--NMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSP
        R KLIR I  S++ V+F++ L I++ W ++ P  PR I++   V A   S +  N+L +    T  S NPN +  I+   + +  T   Q    P
Subjt:  RTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTH--NMLNATIAFTFKSYNPNKRASIHMLSMKMIVTSMGQMFFSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGCATTACTACACAAGGAGAAACATCATCATCATCATCATCAAAACAAAGCTCCTATAGGCAACAACAATATGGGACGACAGCAAAACGTACGAAACTC
ATAAGAATCATAGGAAGAAGCTTGTTGTGTGTAATATTCCTTGTTGGTCTTGCAATTGTCATATGTTGGCTTGTTGTCTTCCCCAAAACCCCACGTCTCATTGTG
GAAACTGGCAAAGTCATAGCTCATACTTCAAGTACTCATAATATGCTCAATGCTACCATAGCTTTCACTTTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATT
CACATGCTTTCTATGAAGATGATAGTCACTAGCATGGGCCAAATGTTTTTCTCCCCCATCCCTACCTTCACGCTAACGCCCGGAAACCAAACCGTCTTCTCCTCC
GCCACTGAAGTCAAATTTGAATACCCGTTTGGGTATAGGGAAGAGATAGATCCAGAGCTTCGCTTTTCAGCTGATGTCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGCATTACTACACAAGGAGAAACATCATCATCATCATCATCAAAACAAAGCTCCTATAGGCAACAACAATATGGGACGACAGCAAAACGTACGAAACTC
ATAAGAATCATAGGAAGAAGCTTGTTGTGTGTAATATTCCTTGTTGGTCTTGCAATTGTCATATGTTGGCTTGTTGTCTTCCCCAAAACCCCACGTCTCATTGTG
GAAACTGGCAAAGTCATAGCTCATACTTCAAGTACTCATAATATGCTCAATGCTACCATAGCTTTCACTTTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATT
CACATGCTTTCTATGAAGATGATAGTCACTAGCATGGGCCAAATGTTTTTCTCCCCCATCCCTACCTTCACGCTAACGCCCGGAAACCAAACCGTCTTCTCCTCC
GCCACTGAAGTCAAATTTGAATACCCGTTTGGGTATAGGGAAGAGATAGATCCAGAGCTTCGCTTTTCAGCTGATGTCAGGTAA
Protein sequenceShow/hide protein sequence
MRSITTQGETSSSSSSKQSSYRQQQYGTTAKRTKLIRIIGRSLLCVIFLVGLAIVICWLVVFPKTPRLIVETGKVIAHTSSTHNMLNATIAFTFKSYNPNKRASI
HMLSMKMIVTSMGQMFFSPIPTFTLTPGNQTVFSSATEVKFEYPFGYREEIDPELRFSADVR