; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G000970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G000970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptiontRNA dimethylallyltransferase 2
Genome locationchr03:1383095..1384494
RNA-Seq ExpressionLsi03G000970
SyntenyLsi03G000970
Gene Ontology termsGO:0006400 - tRNA modification (biological process)
GO:0009691 - cytokinin biosynthetic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0009824 - AMP dimethylallyltransferase activity (molecular function)
GO:0052381 - tRNA dimethylallyltransferase activity (molecular function)
InterPro domainsIPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020785.1 tRNA dimethylallyltransferase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-3882.18Show/hide
Query:  MLAKVEDSWTAQVVEPAFQIIRSFLKD-GSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPP
        ML KVEDSWTAQVVEPA QIIRSFL+D  S TETMNP SSGQTIKKD+WTQY+CQACGN+VLRGAHEWEQHN GR+HRKRMYRLKK+ EGLS LQQ LP 
Subjt:  MLAKVEDSWTAQVVEPAFQIIRSFLKD-GSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPP

Query:  Q
        +
Subjt:  Q
XP_004139473.1 tRNA dimethylallyltransferase 2 [Cucumis sativus]2.5e-4186.73Show/hide
Query:  KVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
        KVEDSWTA VVEPA QIIRSFL DGS TETM PHSS + IKKD+WTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRL+KKCEGLSLL Q LPPQ+
Subjt:  KVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
XP_008461831.1 PREDICTED: tRNA dimethylallyltransferase 2 [Cucumis melo]1.3e-3781.63Show/hide
Query:  KVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
        KVEDSWT  VVEPA QIIRSFL DG  T+TM PHSS   + KD+WTQYICQACG+KVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLL Q LPPQ+
Subjt:  KVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
XP_022937852.1 tRNA dimethylallyltransferase 2 isoform X1 [Cucurbita moschata]1.8e-3680.81Show/hide
Query:  AKVEDSWTAQVVEPAFQIIRSFLKD-GSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQ
        +KVEDSWTAQVVEPA QIIRSFL+D  S TETMNP SSGQTIKKD+WTQY+CQACGN+VLRGAHEWEQHN GR+HRKRMYRLKK+ EG S LQQ LP +
Subjt:  AKVEDSWTAQVVEPAFQIIRSFLKD-GSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQ
XP_038895129.1 tRNA dimethylallyltransferase 2 isoform X1 [Benincasa hispida]7.0e-4490Show/hide
Query:  AKVEDSWTAQVVEPAFQIIRSFLKDG-SGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
        +KVEDSWTAQVVEPA  IIRSFLKDG S TETMNPH+SGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCE LSLLQQ L PQ+
Subjt:  AKVEDSWTAQVVEPAFQIIRSFLKDG-SGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
TrEMBL top hitse value%identityAlignment
A0A0A0LVP2 Uncharacterized protein1.2e-4186.73Show/hide
Query:  KVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
        KVEDSWTA VVEPA QIIRSFL DGS TETM PHSS + IKKD+WTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRL+KKCEGLSLL Q LPPQ+
Subjt:  KVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
A0A1S3CGY2 tRNA dimethylallyltransferase 26.2e-3881.63Show/hide
Query:  KVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
        KVEDSWT  VVEPA QIIRSFL DG  T+TM PHSS   + KD+WTQYICQACG+KVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLL Q LPPQ+
Subjt:  KVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ
A0A6J1CLM5 tRNA dimethylallyltransferase 2 isoform X18.4e-3578.12Show/hide
Query:  KVEDSWTAQVVEPAFQIIRSFLKDGS-GTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLP
        KVEDSWTAQVVEPA  II+SFL+D    TE   PH SGQTIK+D+WTQY+C+ACGNKVLRGAHEWEQHNQGRTHRKR+ RL KKCEGLSL+QQ LP
Subjt:  KVEDSWTAQVVEPAFQIIRSFLKDGS-GTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLP
A0A6J1FCD1 tRNA dimethylallyltransferase 2 isoform X18.9e-3780.81Show/hide
Query:  AKVEDSWTAQVVEPAFQIIRSFLKD-GSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQ
        +KVEDSWTAQVVEPA QIIRSFL+D  S TETMNP SSGQTIKKD+WTQY+CQACGN+VLRGAHEWEQHN GR+HRKRMYRLKK+ EG S LQQ LP +
Subjt:  AKVEDSWTAQVVEPAFQIIRSFLKD-GSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQ
A0A6J1FH65 tRNA dimethylallyltransferase 2 isoform X28.9e-3780.81Show/hide
Query:  AKVEDSWTAQVVEPAFQIIRSFLKD-GSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQ
        +KVEDSWTAQVVEPA QIIRSFL+D  S TETMNP SSGQTIKKD+WTQY+CQACGN+VLRGAHEWEQHN GR+HRKRMYRLKK+ EG S LQQ LP +
Subjt:  AKVEDSWTAQVVEPAFQIIRSFLKD-GSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQ
SwissProt top hitse value%identityAlignment
Q9ZUX7 tRNA dimethylallyltransferase 21.9e-2359.52Show/hide
Query:  MLAKVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLK
        +L+K E+SW AQVV+PA +IIR FL+  + TE+    +SG++I++D+WTQY+C+ACGNK+LRG HEWE H QGRTHRKR  R K
Subjt:  MLAKVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLK
Arabidopsis top hitse value%identityAlignment
AT2G27760.1 tRNAisopentenyltransferase 21.3e-2459.52Show/hide
Query:  MLAKVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLK
        +L+K E+SW AQVV+PA +IIR FL+  + TE+    +SG++I++D+WTQY+C+ACGNK+LRG HEWE H QGRTHRKR  R K
Subjt:  MLAKVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGCCAAAGTGGAGGATTCATGGACTGCACAAGTCGTTGAACCTGCATTCCAGATAATTAGGTCTTTCCTTAAAGATGGTTCAGGGACTGAGACAATGAAC
CCGCATAGTTCAGGGCAAACAATCAAGAAGGACGTGTGGACACAATATATATGCCAGGCTTGTGGGAATAAAGTACTAAGAGGAGCACATGAATGGGAACAACAC
AATCAAGGTCGCACGCATCGAAAACGAATGTATCGGCTTAAGAAGAAGTGCGAAGGCCTTTCCTTGCTGCAACAGACACTACCTCCTCAACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGCCAAAGTGGAGGATTCATGGACTGCACAAGTCGTTGAACCTGCATTCCAGATAATTAGGTCTTTCCTTAAAGATGGTTCAGGGACTGAGACAATGAAC
CCGCATAGTTCAGGGCAAACAATCAAGAAGGACGTGTGGACACAATATATATGCCAGGCTTGTGGGAATAAAGTACTAAGAGGAGCACATGAATGGGAACAACAC
AATCAAGGTCGCACGCATCGAAAACGAATGTATCGGCTTAAGAAGAAGTGCGAAGGCCTTTCCTTGCTGCAACAGACACTACCTCCTCAACAATAACTCTTCTGG
CTTGCAATTTTAGTATTACAAAGTAGTATCGGCTTTTTTCTTTTTTTTTTTAACCCTTTAGATTCAACCACATGTAATTTAAGCTCTTAAGAGTCGAACTGCATA
AGCTTAGTCTATTATGTGCACTGTCTTGGTTTCTGATTTTTTTGCTCCGTTTCCGGGTGATATTCTTTTAGGGGGCTTTAGTGTGAAATCTTAAGCTAAACTTTA
GGATTAGCTGGGGTTTAGGTAGTCTGGATTTTAAAAAACTGTGGTTGATTTGCAGGTTTAAGAAGCCAGGGTGTAAGAAGTCAATGTTTGGAGTACAAGTTTAGA
AAGATTGAGAATGAAGTGCAGATTTAGAAGTCTTCGGTTTGTGAAATATTTTATTGTATTAAATTAATGTTTAATTTTATATTAGTTTAAATTTGTCATGTTAGT
AATTTATTTTGATTATTTT
Protein sequenceShow/hide protein sequence
MLAKVEDSWTAQVVEPAFQIIRSFLKDGSGTETMNPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEGLSLLQQTLPPQQ