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Lsi03G001060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G001060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionhistidine-containing phosphotransfer protein 2-like
Genome locationchr03:1472302..1473351
RNA-Seq ExpressionLsi03G001060
SyntenyLsi03G001060
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR036641 - HPT domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583641.1 Histidine-containing phosphotransfer protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3855.26Show/hide
Query:  MSASAPSSSVLPQP--------EHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAV
        MSAS  SS+  P P        +HP   MI+KFI AL++QGFLD+NFNN  NL EN+NSL TFC DAEPKL+ +EK L  E V+F T  N +E +++ A 
Subjt:  MSASAPSSSVLPQP--------EHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAV

Query:  RVGGSRVVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
         VGG R+ +AC D Q  C DNN +   +AY+K+ WE+YVLRDCFHHILQAER
Subjt:  RVGGSRVVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

XP_008461693.1 PREDICTED: histidine-containing phosphotransfer protein 5-like [Cucumis melo]7.0e-4565.97Show/hide
Query:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV
        MSA+A SSS  PQP      MI KFIDAL++QGFLD +FNN R  P + +SLVTFC ++EPKLEII+KAL  EHVDFRTA+NT EMIRS A RVGGSRV 
Subjt:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV

Query:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
        SAC   Q+H N+NN+  S +AYKKL WE+YV+RD FHHILQAE+
Subjt:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

XP_022970357.1 histidine-containing phosphotransfer protein 2-like [Cucurbita maxima]1.7e-3854.61Show/hide
Query:  MSASAPSSSVLPQP--------EHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAV
        MSAS  SS+  P P        +HP   MI+KFI AL++QGFLD+NFNN  NL EN+NSL TFC DAEPKL+ +EK L  E V+F T +N +E +++ A 
Subjt:  MSASAPSSSVLPQP--------EHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAV

Query:  RVGGSRVVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
         VGG R+ +AC + Q  C DNN +   +AY+K+ WE+YVLRDCFHHILQAER
Subjt:  RVGGSRVVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

XP_031736154.1 histidine-containing phosphotransfer protein 1-like [Cucumis sativus]8.6e-4362.5Show/hide
Query:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV
        MSA+A SSS   QP      MI KFIDAL++QGFLD++FNN R  P + +SLVTFC ++EPKLEII+K+L  EH+DFRTA++T EMIRS A RVGGSRV 
Subjt:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV

Query:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
        SAC   Q+H N+NN+  S +AYKKL WE+YV+RD FHH+LQAE+
Subjt:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

XP_038895515.1 histidine-containing phosphotransfer protein 1-like [Benincasa hispida]9.1e-5373.97Show/hide
Query:  MSASAPSSSVLPQPE--HPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSR
        MSASA SSS  P     HPH  MI+KFIDAL++QGFLDE+FN  RNLPENQ+SL  FC +AEPKLE IEKAL SE+VDFR+ +NTVEMIRSGA RVGG+R
Subjt:  MSASAPSSSVLPQPE--HPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSR

Query:  VVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
        V SACTD QQHCN NNI+ S  AYKKL WE+YVLRDCFHHILQAER
Subjt:  VVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

TrEMBL top hitse value%identityAlignment
A0A0A0LVC3 Uncharacterized protein4.1e-4362.5Show/hide
Query:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV
        MSA+A SSS   QP      MI KFIDAL++QGFLD++FNN R  P + +SLVTFC ++EPKLEII+K+L  EH+DFRTA++T EMIRS A RVGGSRV 
Subjt:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV

Query:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
        SAC   Q+H N+NN+  S +AYKKL WE+YV+RD FHH+LQAE+
Subjt:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

A0A1S3CFS8 histidine-containing phosphotransfer protein 5-like3.4e-4565.97Show/hide
Query:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV
        MSA+A SSS  PQP      MI KFIDAL++QGFLD +FNN R  P + +SLVTFC ++EPKLEII+KAL  EHVDFRTA+NT EMIRS A RVGGSRV 
Subjt:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV

Query:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
        SAC   Q+H N+NN+  S +AYKKL WE+YV+RD FHHILQAE+
Subjt:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

A0A5D3CFG6 Histidine-containing phosphotransfer protein 5-like3.4e-4565.97Show/hide
Query:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV
        MSA+A SSS  PQP      MI KFIDAL++QGFLD +FNN R  P + +SLVTFC ++EPKLEII+KAL  EHVDFRTA+NT EMIRS A RVGGSRV 
Subjt:  MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVV

Query:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
        SAC   Q+H N+NN+  S +AYKKL WE+YV+RD FHHILQAE+
Subjt:  SACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

A0A6J1EVY2 histidine-containing phosphotransfer protein 2-like1.4e-3855.26Show/hide
Query:  MSASAPSSSVLPQP--------EHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAV
        MSAS  SS+  P P        +HP   MI+KFI AL++QGFLD+NFNN  NL EN+NSL TFC DAEPKL+ +EK L  E V+F T  N +E +++ A 
Subjt:  MSASAPSSSVLPQP--------EHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAV

Query:  RVGGSRVVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
         VGG R+ +AC D Q  C DNN +   +AY+K+ WE+YVLRDCFHHILQAER
Subjt:  RVGGSRVVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

A0A6J1HYV4 histidine-containing phosphotransfer protein 2-like8.1e-3954.61Show/hide
Query:  MSASAPSSSVLPQP--------EHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAV
        MSAS  SS+  P P        +HP   MI+KFI AL++QGFLD+NFNN  NL EN+NSL TFC DAEPKL+ +EK L  E V+F T +N +E +++ A 
Subjt:  MSASAPSSSVLPQP--------EHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAV

Query:  RVGGSRVVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER
         VGG R+ +AC + Q  C DNN +   +AY+K+ WE+YVLRDCFHHILQAER
Subjt:  RVGGSRVVSACTDFQQHCNDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGTCGGCGCCTTCCTCTTCCGTTCTCCCACAGCCGGAACATCCTCACATAATCATGATCCAGAAATTCATTGACGCTTTGCAAAAACAGGGATTTCTTGACGA
GAACTTCAATAACTTGAGAAATCTCCCTGAGAATCAAAACTCCTTGGTTACATTCTGCAGTGACGCTGAACCTAAGCTCGAAATTATTGAGAAAGCTCTGGGAAGCGAGC
ATGTGGATTTTCGTACTGCGTTAAACACCGTGGAAATGATCAGATCTGGTGCCGTTAGGGTTGGTGGAAGTCGAGTAGTAAGTGCTTGTACTGATTTTCAACAACATTGC
AATGACAATAACATTCAGCGTTCATATGATGCTTACAAGAAGCTCCACTGGGAATTCTATGTTTTACGTGATTGTTTCCACCATATTCTTCAGGCAGAGAGGATAGCGTG
A
mRNA sequenceShow/hide mRNA sequence
CCACCAAGTTTCTTTAGTGCAGAGAGCTGTGACTTTCAGAAAGCAAAAACTTAGAAGAACAATCCATTAATCCAAAGAAAACTTCTCCCAATGTCGGCGTCGGCGCCTTC
CTCTTCCGTTCTCCCACAGCCGGAACATCCTCACATAATCATGATCCAGAAATTCATTGACGCTTTGCAAAAACAGGGATTTCTTGACGAGAACTTCAATAACTTGAGAA
ATCTCCCTGAGAATCAAAACTCCTTGGTTACATTCTGCAGTGACGCTGAACCTAAGCTCGAAATTATTGAGAAAGCTCTGGGAAGCGAGCATGTGGATTTTCGTACTGCG
TTAAACACCGTGGAAATGATCAGATCTGGTGCCGTTAGGGTTGGTGGAAGTCGAGTAGTAAGTGCTTGTACTGATTTTCAACAACATTGCAATGACAATAACATTCAGCG
TTCATATGATGCTTACAAGAAGCTCCACTGGGAATTCTATGTTTTACGTGATTGTTTCCACCATATTCTTCAGGCAGAGAGGATAGCGTGAACAGATTAGTGATGAAGAA
AACATGATTTGGA
Protein sequenceShow/hide protein sequence
MSASAPSSSVLPQPEHPHIIMIQKFIDALQKQGFLDENFNNLRNLPENQNSLVTFCSDAEPKLEIIEKALGSEHVDFRTALNTVEMIRSGAVRVGGSRVVSACTDFQQHC
NDNNIQRSYDAYKKLHWEFYVLRDCFHHILQAERIA