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Lsi03G001330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G001330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCopper ion binding isoform 3
Genome locationchr03:1842922..1845218
RNA-Seq ExpressionLsi03G001330
SyntenyLsi03G001330
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139491.1 uncharacterized protein At2g27730, mitochondrial [Cucumis sativus]6.8e-1986.57Show/hide
Query:  GPKPEEKAGGSVTDSIP-SGSASASGA-STEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEK G SV DS+P S SASASGA STEKISTDK RNY VVAGTVTILGALGWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIP-SGSASASGA-STEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
XP_022142661.1 uncharacterized protein At2g27730, mitochondrial [Momordica charantia]1.9e-2188.06Show/hide
Query:  GPKPEEKAGGSVTDSIPSG--SASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEK GGS  DSIPSG  SASASGAS EKISTDKHRNY VVAGTVTILGA+GWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIPSG--SASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
XP_022967119.1 uncharacterized protein At2g27730, mitochondrial [Cucurbita maxima]6.8e-1984.85Show/hide
Query:  GPKPEEKAGGSVTDSIPSGSA-SASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEK   SV +SIPSGSA SASGASTEKIS+DK+RNY VVAGTVTI GALGWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIPSGSA-SASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
XP_038893784.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]4.8e-2596.92Show/hide
Query:  GPKPEEKAGGSVTDSIPSGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEKAGGSVTDSIPSGSASASGASTEKIS+DKHRNY VVAGTVTILGALGWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIPSGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
XP_038895664.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]1.2e-2087.88Show/hide
Query:  GPKPEEKAGGSVTDSIPSGSASA-SGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEK  GSV  S+PSGSASA SGASTEKIS+DKHRNY VVAGTVTILGALGWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIPSGSASA-SGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
TrEMBL top hitse value%identityAlignment
A0A0A0LT33 Uncharacterized protein3.3e-1986.57Show/hide
Query:  GPKPEEKAGGSVTDSIP-SGSASASGA-STEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEK G SV DS+P S SASASGA STEKISTDK RNY VVAGTVTILGALGWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIP-SGSASASGA-STEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
A0A1S3CEE3 uncharacterized protein At2g27730, mitochondrial4.3e-1976Show/hide
Query:  GPKPEEKAGGSVTDSIP----------SGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEK G SV DS+P          S SASASGAS+EKISTDK RNY VVAGTVTILGALGWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIP----------SGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
A0A5A7T219 Uncharacterized protein4.3e-1976Show/hide
Query:  GPKPEEKAGGSVTDSIP----------SGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEK G SV DS+P          S SASASGAS+EKISTDK RNY VVAGTVTILGALGWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIP----------SGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
A0A6J1CMV3 uncharacterized protein At2g27730, mitochondrial9.2e-2288.06Show/hide
Query:  GPKPEEKAGGSVTDSIPSG--SASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEK GGS  DSIPSG  SASASGAS EKISTDKHRNY VVAGTVTILGA+GWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIPSG--SASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
A0A6J1HVU8 uncharacterized protein At2g27730, mitochondrial3.3e-1984.85Show/hide
Query:  GPKPEEKAGGSVTDSIPSGSA-SASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
        GPKPEEK   SV +SIPSGSA SASGASTEKIS+DK+RNY VVAGTVTI GALGWYLKSKKKPEEV
Subjt:  GPKPEEKAGGSVTDSIPSGSA-SASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV
SwissProt top hitse value%identityAlignment
Q9ZUX4 Uncharacterized protein At2g27730, mitochondrial5.0e-0952.38Show/hide
Query:  PEEKAGGSVTDS-IPSGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKS--KKKPE
        P E+A GS +++ +   +ASAS  S  K+S DK+RNY VVAG V I+G++GWYLK+  KK+PE
Subjt:  PEEKAGGSVTDS-IPSGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKS--KKKPE
Arabidopsis top hitse value%identityAlignment
AT2G27730.1 copper ion binding3.6e-1052.38Show/hide
Query:  PEEKAGGSVTDS-IPSGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKS--KKKPE
        P E+A GS +++ +   +ASAS  S  K+S DK+RNY VVAG V I+G++GWYLK+  KK+PE
Subjt:  PEEKAGGSVTDS-IPSGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKS--KKKPE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGACCTAAACCAGAAGAAAAGGCAGGAGGGTCAGTAACTGATTCCATTCCAAGTGGCTCAGCCTCAGCATCAGGAGCATCAACAGAGAAAATATCTACTGACAA
ACACCGCAATTATGTTGTTGTAGCTGGAACTGTGACTATTCTTGGTGCTCTTGGATGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGGACCTAAACCAGAAGAAAAGGCAGGAGGGTCAGTAACTGATTCCATTCCAAGTGGCTCAGCCTCAGCATCAGGAGCATCAACAGAGAAAATATCTACTGACAA
ACACCGCAATTATGTTGTTGTAGCTGGAACTGTGACTATTCTTGGTGCTCTTGGATGGTATCTCAAATCTAAAAAGAAGCCAGAAGAAGTCTAGGATTGAGTTAACAAAT
GATATCATCAGCATCTGAATCATGGGGGGAAGGCGAGTTCTCTCCTTTCCTCTACTGAATAAACCAAAAATTGAGATGTCGTATGGATCTTGGTTACTAAATATATTCTG
CTGTTTAGACTTACGTTTCTCTTTGAAAATAGTTTTCTTGGCCTTATTTCTGTTTACTTCCCTGAAAAATTAACCCTTAGAGACAGTTACAGCATGGAACATACTCTGTG
ACCAAGACTTGGTTTATTGGATTTCAATTTCACATTCTCTTCCATAAGATTGAGTAAATACTACTGTTCTATCGTTTCTAACGTGGTTTTCTAAAAAAGAAAATACACGC
CGTTACCATTACTTTGTGAAAAAT
Protein sequenceShow/hide protein sequence
MDGPKPEEKAGGSVTDSIPSGSASASGASTEKISTDKHRNYVVVAGTVTILGALGWYLKSKKKPEEV