CuGenDBv2

Gene ID	Lsi03G001390
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
Genome location	chr03:1991732..1993277
RNA-Seq Expression	Lsi03G001390
Synteny	Lsi03G001390
Gene Ontology terms	GO:0006487 - protein N-linked glycosylation (biological process) GO:0008250 - oligosaccharyltransferase complex (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016740 - transferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035677.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Cucumis melo var. makuwa]

9.8e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQA SIFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

KAE8637351.1 hypothetical protein CSA_011901 [Cucumis sativus]

7.5e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQAA+IFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

XP_008463606.1 PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Cucumis melo]

9.8e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQA SIFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

XP_011654943.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Cucumis sativus]

7.5e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQAA+IFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

XP_031745951.1 LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus]

7.5e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQAA+IFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYL0 Uncharacterized protein

3.6e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQAA+IFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

A0A1S3CL79 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

4.7e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQA SIFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

A0A5A7T227 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

4.7e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQA SIFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

A0A5D3E468 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

4.7e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQA SIFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

A0A6J1I2A8 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

4.7e-16

95.74

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG
        MARNLVPFLVLL WISICQAA IFQPISDSHRYAALELFRPTDGVFG
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFG

SwissProt top hits

e value

%identity

Alignment

Q93Z16 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

1.3e-07

60.87

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVF
        MA   V FLVL+  ++IC AAS+FQPISDSHR AAL++F P DG +
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVF

Arabidopsis top hits

e value

%identity

Alignment

AT4G21150.1 ribophorin II (RPN2) family protein

9.5e-09

60.87

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVF
        MA   V FLVL+  ++IC AAS+FQPISDSHR AAL++F P DG +
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVF

AT4G21150.2 ribophorin II (RPN2) family protein

9.5e-09

60.87

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVF
        MA   V FLVL+  ++IC AAS+FQPISDSHR AAL++F P DG +
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVF

AT4G21150.3 ribophorin II (RPN2) family protein

9.5e-09

60.87

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Query:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVF
        MA   V FLVL+  ++IC AAS+FQPISDSHR AAL++F P DG +
Subjt:  MARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVF

Sequences

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CDS sequence

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ATGACGAGGTTCCAAAACGCACGGACACGCAGACCGGCCACAGTCACCATTCGAGCCGTTTCTTCCCTTCTCACACTCAACGTCGTCGGCCAGTTGAACTCCTCGCCGTT
TCTTTCTTTCCCTTTTCTCTTGTCGGACGCTCACCGGCCAATCGAATCAGTCAGCCCCTCAGTCGAACGAGACATTCGCTCGTCCTCAACCACGCCGAGAAACGCTGTCA
ACCGATCTTCTCTCACTAGGCTGTTCTTCAGATATGAGTTAGTGGGTTCTAGAAAATGTGTTTGTGTTCTGATCGAAACCCCAACCGGGTTGGGTTGGGTTACACAACTC
ATTCGGTCATCGGTGCATTCGGGCAGACAATCCGGTCCGATTGGTCTAAGAAACTCACCAAACCCAATCCAACCGCCAATGGCCAGAAACCTAGTTCCATTTCTGGTGCT
ACTGTCTTGGATTTCGATCTGCCAAGCTGCAAGCATTTTTCAGCCGATCTCAGATTCACATCGATATGCGGCTCTAGAGCTCTTCCGGCCTACTGATGGAGTATTTGGAA
GATTTCACGTAATCAGACGTGGCAGTCAAGGTCTTGGACAAATCATGGGTGGGAAGGTTTCGTCACTAATTCTTAAATAG

mRNA sequence

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Protein sequence

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MTRFQNARTRRPATVTIRAVSSLLTLNVVGQLNSSPFLSFPFLLSDAHRPIESVSPSVERDIRSSSTTPRNAVNRSSLTRLFFRYELVGSRKCVCVLIETPTGLGWVTQL
IRSSVHSGRQSGPIGLRNSPNPIQPPMARNLVPFLVLLSWISICQAASIFQPISDSHRYAALELFRPTDGVFGRFHVIRRGSQGLGQIMGGKVSSLILK

Lsi03G001390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome