; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G001670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G001670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:2237418..2238960
RNA-Seq ExpressionLsi03G001670
SyntenyLsi03G001670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0KSG1 Uncharacterized protein7.6e-2048.99Show/hide
Query:  MQHCWSSHFRQVESSGQKCPMEFSSRLLAKSGPIGRMQGAKLKISPSRSYTV--------------LQITQSAT--------------------------
        M  CW    RQVESSGQKCP+EFSSR LAKSGPIGR++GAKLKIS SR+++V              +  T SA                           
Subjt:  MQHCWSSHFRQVESSGQKCPMEFSSRLLAKSGPIGRMQGAKLKISPSRSYTV--------------LQITQSAT--------------------------

Query:  ----STAF----FGMLNCIANNAAAAGQKATRRILIFSATSRAHPRFSS
            S +F    FGMLN IANNAAAAGQKATR I IF+ATS+AHPRF +
Subjt:  ----STAF----FGMLNCIANNAAAAGQKATRRILIFSATSRAHPRFSS
A0A0A0KVT1 Uncharacterized protein4.3e-0783.78Show/hide
Query:  FGMLNCIANNAAAAGQKATRRILIFSATSRAHPRFSS
        FGMLNCIANNAAAAGQKATR I IF+ATS+AHPRF +
Subjt:  FGMLNCIANNAAAAGQKATRRILIFSATSRAHPRFSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACATTGCTGGTCGAGCCATTTCAGGCAAGTTGAATCTTCTGGCCAGAAGTGCCCAATGGAATTTTCGAGTCGATTGCTTGCTAAGAGTGGGCCAATTGGG
AGAATGCAAGGAGCTAAGCTGAAGATTTCTCCTTCAAGGTCATATACTGTATTGCAGATAACCCAATCTGCCACTTCTACTGCTTTCTTTGGGATGCTAAATTGC
ATAGCCAACAATGCCGCAGCTGCTGGCCAGAAGGCGACTCGCCGGATTCTCATCTTCTCAGCAACTTCTAGAGCCCACCCAAGATTCTCATCAGCAATAACACTG
TCTAGCCACTTTGTCATTTTTGTATATGATGGCAGGCTTAGAGTTCTAATGGCCATGGAGAGTTTAACTCCACAGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACATTGCTGGTCGAGCCATTTCAGGCAAGTTGAATCTTCTGGCCAGAAGTGCCCAATGGAATTTTCGAGTCGATTGCTTGCTAAGAGTGGGCCAATTGGG
AGAATGCAAGGAGCTAAGCTGAAGATTTCTCCTTCAAGGTCATATACTGTATTGCAGATAACCCAATCTGCCACTTCTACTGCTTTCTTTGGGATGCTAAATTGC
ATAGCCAACAATGCCGCAGCTGCTGGCCAGAAGGCGACTCGCCGGATTCTCATCTTCTCAGCAACTTCTAGAGCCCACCCAAGATTCTCATCAGCAATAACACTG
TCTAGCCACTTTGTCATTTTTGTATATGATGGCAGGCTTAGAGTTCTAATGGCCATGGAGAGTTTAACTCCACAGGAGTGA
Protein sequenceShow/hide protein sequence
MQHCWSSHFRQVESSGQKCPMEFSSRLLAKSGPIGRMQGAKLKISPSRSYTVLQITQSATSTAFFGMLNCIANNAAAAGQKATRRILIFSATSRAHPRFSSAITL
SSHFVIFVYDGRLRVLMAMESLTPQE