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Lsi03G002380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G002380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHEAT repeat-containing protein 5B isoform X2
Genome locationchr03:2965854..2966654
RNA-Seq ExpressionLsi03G002380
SyntenyLsi03G002380
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
InterPro domainsIPR044218 - Protein SWEETIE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578499.1 Protein SWEETIE, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2193.44Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK  +LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
TYK00562.1 HEAT repeat-containing protein 5B [Cucumis melo var. makuwa]5.9e-2371.74Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLYVSALFIIVSVLHCLRQYTTGENKGDRHIKAE
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK                     Q TTGE KGDRH +A+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLYVSALFIIVSVLHCLRQYTTGENKGDRHIKAE
XP_008459470.1 PREDICTED: HEAT repeat-containing protein 5B isoform X2 [Cucumis melo]7.3e-2193.44Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK  +LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
XP_022939608.1 protein SWEETIE isoform X1 [Cucurbita moschata]7.3e-2193.44Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK  +LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
XP_023550988.1 protein SWEETIE isoform X1 [Cucurbita pepo subsp. pepo]7.3e-2193.44Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK  +LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
TrEMBL top hitse value%identityAlignment
A0A0A0KUL5 Uncharacterized protein3.8e-2370.65Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLYVSALFIIVSVLHCLRQYTTGENKGDRHIKAE
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK                     Q TTGEN+GD H +A+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLYVSALFIIVSVLHCLRQYTTGENKGDRHIKAE
A0A5A7T8T6 HEAT repeat-containing protein 5B isoform X23.5e-2193.44Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK  +LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
A0A5D3BP95 HEAT repeat-containing protein 5B2.9e-2371.74Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLYVSALFIIVSVLHCLRQYTTGENKGDRHIKAE
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK                     Q TTGE KGDRH +A+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLYVSALFIIVSVLHCLRQYTTGENKGDRHIKAE
A0A6J1FM35 protein SWEETIE isoform X13.5e-2193.44Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK  +LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
A0A6J1FN77 protein SWEETIE isoform X33.5e-2193.44Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
        MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK  +LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLY
SwissProt top hitse value%identityAlignment
F4HRS2 Protein SWEETIE5.1e-1775Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLL
        M K    +NVPLSRFGVLVAQLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK  LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLL
Arabidopsis top hitse value%identityAlignment
AT1G67140.1 HEAT repeat-containing protein3.6e-1875Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLL
        M K    +NVPLSRFGVLVAQLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK  LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLL
AT1G67140.2 HEAT repeat-containing protein3.6e-1875Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLL
        M K    +NVPLSRFGVLVAQLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK  LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLL
AT1G67140.3 HEAT repeat-containing protein3.6e-1875Show/hide
Query:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLL
        M K    +NVPLSRFGVLVAQLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK  LL+
Subjt:  MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGACTTACGTAAGAGAGAATGTGCCTCTCTCTCGTTTTGGTGTCTTGGTAGCTCAGCTAGAATCCATAGTCGCCTCCGCTGCTCAACAGCCTCCGGAGCCCCT
TCTCTGCTTCGATCTTCTATCCGATCTCATTTCCGCCATCGATGAAGAGCCCAAGTCAGTTTTATTGTTATATGTTTCTGCTCTTTTCATCATCGTTTCCGTCTTGCATT
GTCTACGGCAGTATACGACTGGGGAGAATAAAGGAGACCGTCACATAAAAGCAGAGCACAAAGGCCTCCATAGATATTTAAAGAAGAAAATACAGTCGCATGTCTTGCTT
ACAATGGATAGCAAATAA
mRNA sequenceShow/hide mRNA sequence
GTAAATTTTACCTAAATAAGAAAAAAAAAAAAAGGTGAAAAGACAGAGCGATCGGCAAACGATCGACTAATCAACACTGGACTCTGATTCACCGGCTTCAATCGACATAG
AATTGCCACTCTGCACACTGGAGCAGCTCACTTCTTCTCGATTCCTTCTCACACTCTACAATGGTGAAGACTTACGTAAGAGAGAATGTGCCTCTCTCTCGTTTTGGTGT
CTTGGTAGCTCAGCTAGAATCCATAGTCGCCTCCGCTGCTCAACAGCCTCCGGAGCCCCTTCTCTGCTTCGATCTTCTATCCGATCTCATTTCCGCCATCGATGAAGAGC
CCAAGTCAGTTTTATTGTTATATGTTTCTGCTCTTTTCATCATCGTTTCCGTCTTGCATTGTCTACGGCAGTATACGACTGGGGAGAATAAAGGAGACCGTCACATAAAA
GCAGAGCACAAAGGCCTCCATAGATATTTAAAGAAGAAAATACAGTCGCATGTCTTGCTTACAATGGATAGCAAATAA
Protein sequenceShow/hide protein sequence
MVKTYVRENVPLSRFGVLVAQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKSVLLLYVSALFIIVSVLHCLRQYTTGENKGDRHIKAEHKGLHRYLKKKIQSHVLL
TMDSK