CuGenDBv2

Gene ID	Lsi03G002390
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	HEAT repeat-containing protein 5B isoform X2
Genome location	chr03:2976160..2976636
RNA-Seq Expression	Lsi03G002390
Synteny	Lsi03G002390
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process)
InterPro domains	IPR044218 - Protein SWEETIE

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578499.1 Protein SWEETIE, partial [Cucurbita argyrosperma subsp. sororia]

3.8e-29

93.33

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Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

XP_022939608.1 protein SWEETIE isoform X1 [Cucurbita moschata]

3.8e-29

93.33

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Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

XP_022939610.1 protein SWEETIE isoform X3 [Cucurbita moschata]

3.8e-29

93.33

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Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

XP_022992747.1 protein SWEETIE isoform X1 [Cucurbita maxima]

3.8e-29

93.33

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Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

XP_023550988.1 protein SWEETIE isoform X1 [Cucurbita pepo subsp. pepo]

3.8e-29

93.33

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Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FHQ3 protein SWEETIE isoform X2

1.8e-29

93.33

Show/hide

Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

A0A6J1FM35 protein SWEETIE isoform X1

1.8e-29

93.33

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Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

A0A6J1FN77 protein SWEETIE isoform X3

1.8e-29

93.33

Show/hide

Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

A0A6J1JQS3 protein SWEETIE isoform X1

1.8e-29

93.33

Show/hide

Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

A0A6J1K049 protein SWEETIE isoform X2

1.8e-29

93.33

Show/hide

Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL
        ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARII+KGDTISVYSRVSSLQGFLSDGKRNEPHKIAG+ + L
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKL

SwissProt top hits

e value

%identity

Alignment

F4HRS2 Protein SWEETIE

1.5e-23

74.29

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Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAG
        ES+L+ QRKCE+ALYSL+ LGARRPVRHLASV MA+II+ GD+IS+YSR SSLQGFLSDGKR++P ++AG
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAG

Arabidopsis top hits

e value

%identity

Alignment

AT1G67140.1 HEAT repeat-containing protein

1.0e-24

74.29

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Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAG
        ES+L+ QRKCE+ALYSL+ LGARRPVRHLASV MA+II+ GD+IS+YSR SSLQGFLSDGKR++P ++AG
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAG

AT1G67140.2 HEAT repeat-containing protein

1.0e-24

74.29

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Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAG
        ES+L+ QRKCE+ALYSL+ LGARRPVRHLASV MA+II+ GD+IS+YSR SSLQGFLSDGKR++P ++AG
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAG

AT1G67140.3 HEAT repeat-containing protein

1.0e-24

74.29

Show/hide

Query:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAG
        ES+L+ QRKCE+ALYSL+ LGARRPVRHLASV MA+II+ GD+IS+YSR SSLQGFLSDGKR++P ++AG
Subjt:  ESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAG

Sequences

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CDS sequence

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ATGCATAGCCGTCGACTTTCGAAACTTCAATCCCATTCAATGGAGGACTTCTCAATTCTTGCGATTCCCAGCCCAGAATCTATACTGTTGTGGCAAAGAAAATGCGAGGA
AGCACTCTATTCTCTGCTCATTCTTGGTGCCAGACGACCGGTGCGTCATCTCGCATCAGTAGTAATGGCAAGAATCATAACCAAGGGAGATACAATTTCGGTGTATTCAC
GAGTTAGTAGTCTTCAAGGGTTTCTATCTGATGGGAAAAGGAATGAACCTCATAAGATTGCTGGTTTGTTACGAAAGCTTGAACTTGATTAG

mRNA sequence

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Protein sequence

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MHSRRLSKLQSHSMEDFSILAIPSPESILLWQRKCEEALYSLLILGARRPVRHLASVVMARIITKGDTISVYSRVSSLQGFLSDGKRNEPHKIAGLLRKLELD

Lsi03G002390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome