; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G002630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G002630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:3255714..3256388
RNA-Seq ExpressionLsi03G002630
SyntenyLsi03G002630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133523.1 uncharacterized protein LOC111006084 [Momordica charantia]2.3e-9579.08Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDG-CDQKAGPRSLVVSTG---RLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREA
        MASLGIRCGGNCGVLDR YVN HDG CDQKAGPRSLVV TG   R R+SR ++SAM SLQPVNR    R +GN EVISRDKLDEWMKESVVDIVKNLREA
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDG-CDQKAGPRSLVVSTG---RLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREA

Query:  PLFLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVE-----------IDGESKAWGIVIQGRGVECGAPVCYLLK
        PLFLRFYTT  EDG+ ARFETEKAVEE RWP+LE+QWK+GAAP PEGI+FVQ+LE+ D  E           I GESKAWGIVIQGRGVE G PVCYLLK
Subjt:  PLFLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVE-----------IDGESKAWGIVIQGRGVECGAPVCYLLK

Query:  TSRAAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ
        TS AAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ
Subjt:  TSRAAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ

XP_022938776.1 uncharacterized protein LOC111444891 [Cucurbita moschata]4.3e-10283.93Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL
        MASLGIRCGGNCGVLDRRYVN HDGCDQKAGPRSL VSTG LRKS + +S +KSLQPVNR++KER D N EVISRDK DEWMKESVV+IVKNLREAPLFL
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL

Query:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC
        R YTT +EDG+ ARFETEKAVEEDRWPILEKQWKSG+ PTPEGI+FV++LE+ D    DGESKAWGIVIQGRGVE GAPVCYLLKTSRAAGLG+WCTHFC
Subjt:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC

Query:  LVRVKNFRETTKSQLENCWLLQNQ
        LVRVKNFRETTKSQL+NCWL+QNQ
Subjt:  LVRVKNFRETTKSQLENCWLLQNQ

XP_022993514.1 uncharacterized protein LOC111489497 [Cucurbita maxima]4.3e-10284.38Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL
        MASLGIRCGGNCGVLDRRYVN HDGCDQKAGPRSL VSTG LRKS + +S MKSLQ VNR++K+R D N EVISRDK DEWMKESVV+IVKNLREAPLFL
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL

Query:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC
        R YTT +EDG+ ARFETEKAVEEDRWPILEKQWKSGAAPTPEGI+FV++LE+ D    DGESKAWGIVIQGRGVE GAPVCYLLKTSRAAGLG+WCTHFC
Subjt:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC

Query:  LVRVKNFRETTKSQLENCWLLQNQ
        LVRVKNFRETTKSQL+NCWL+QNQ
Subjt:  LVRVKNFRETTKSQLENCWLLQNQ

XP_023549554.1 uncharacterized protein LOC111808023 [Cucurbita pepo subsp. pepo]6.2e-10183.93Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL
        MASLGIRCGGNCGVLDRRYVN HDGCDQKA PRSL VSTG LRKS + +S MKSLQPV R++KER D N EVISRDK DEWMKESVV+IVKNLREAPLFL
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL

Query:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC
        R YTT +EDG+ ARFETEKAVEEDRWPILEKQWKSG+APTPEGI+FV++LE+ D    DGESKAWGIVIQGRGVE GAPVCYLLKTSRAAGLG+WCTHFC
Subjt:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC

Query:  LVRVKNFRETTKSQLENCWLLQNQ
        LVRVKNFRETTKSQL+NCWL+QNQ
Subjt:  LVRVKNFRETTKSQLENCWLLQNQ

XP_038884231.1 uncharacterized protein LOC120075128 [Benincasa hispida]4.9e-9883.19Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL
        MASLGI+CGGNCG+L     N HDGCDQK  PRSL++ST RL+KSR+Y+SAMKSLQPVNR    RKDGNGEVIS DKLDEWMKESVVDIVKNLREAPLFL
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL

Query:  RFYTTEEEDGK-TARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEE-SDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTH
        RFYT    DGK TARFETEKAVEEDRWPILEKQWK+GA PTPEGIIFVQKLE+  DE EIDGESKAWGIV+QGRGVE GAPVCYLLKT R AGLGLWCTH
Subjt:  RFYTTEEEDGK-TARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEE-SDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTH

Query:  FCLVRVKNFRETTKSQLENCWLLQNQ
        FCLVRVKNFRETTKSQL+NCWL QNQ
Subjt:  FCLVRVKNFRETTKSQLENCWLLQNQ

TrEMBL top hitse value%identityAlignment
A0A1S3C411 uncharacterized protein LOC1034966202.7e-9477.22Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKA--GPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPL
        MASLGIRCGGNCGVL     N ++GCD KA   PRSLV+ST RLRKSR+YI+AMKSL+PVNR    RK+GN EVISR+KLDEWMKESVVDIVKNLREAPL
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKA--GPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPL

Query:  FLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEE-----------SDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTS
        F+RFY   +E+GKTARFETEK VEE RWP+LEKQWK+GA PTPEGIIFVQKLEE            +EVE++GESKAWGIV+QGRGVE GAPVCYLLKTS
Subjt:  FLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEE-----------SDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTS

Query:  RAAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ
        RAAGLGLWCTHFCLVRVKNFRETTKSQL+NCWL+QNQ
Subjt:  RAAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ

A0A5A7U7V4 Uncharacterized protein2.7e-9477.22Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKA--GPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPL
        MASLGIRCGGNCGVL     N ++GCD KA   PRSLV+ST RLRKSR+YI+AMKSL+PVNR    RK+GN EVISR+KLDEWMKESVVDIVKNLREAPL
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKA--GPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPL

Query:  FLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEE-----------SDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTS
        F+RFY   +E+GKTARFETEK VEE RWP+LEKQWK+GA PTPEGIIFVQKLEE            +EVE++GESKAWGIV+QGRGVE GAPVCYLLKTS
Subjt:  FLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEE-----------SDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTS

Query:  RAAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ
        RAAGLGLWCTHFCLVRVKNFRETTKSQL+NCWL+QNQ
Subjt:  RAAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ

A0A6J1BZC8 uncharacterized protein LOC1110060841.1e-9579.08Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDG-CDQKAGPRSLVVSTG---RLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREA
        MASLGIRCGGNCGVLDR YVN HDG CDQKAGPRSLVV TG   R R+SR ++SAM SLQPVNR    R +GN EVISRDKLDEWMKESVVDIVKNLREA
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDG-CDQKAGPRSLVVSTG---RLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREA

Query:  PLFLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVE-----------IDGESKAWGIVIQGRGVECGAPVCYLLK
        PLFLRFYTT  EDG+ ARFETEKAVEE RWP+LE+QWK+GAAP PEGI+FVQ+LE+ D  E           I GESKAWGIVIQGRGVE G PVCYLLK
Subjt:  PLFLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVE-----------IDGESKAWGIVIQGRGVECGAPVCYLLK

Query:  TSRAAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ
        TS AAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ
Subjt:  TSRAAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQNQ

A0A6J1FE33 uncharacterized protein LOC1114448912.1e-10283.93Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL
        MASLGIRCGGNCGVLDRRYVN HDGCDQKAGPRSL VSTG LRKS + +S +KSLQPVNR++KER D N EVISRDK DEWMKESVV+IVKNLREAPLFL
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL

Query:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC
        R YTT +EDG+ ARFETEKAVEEDRWPILEKQWKSG+ PTPEGI+FV++LE+ D    DGESKAWGIVIQGRGVE GAPVCYLLKTSRAAGLG+WCTHFC
Subjt:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC

Query:  LVRVKNFRETTKSQLENCWLLQNQ
        LVRVKNFRETTKSQL+NCWL+QNQ
Subjt:  LVRVKNFRETTKSQLENCWLLQNQ

A0A6J1K0D9 uncharacterized protein LOC1114894972.1e-10284.38Show/hide
Query:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL
        MASLGIRCGGNCGVLDRRYVN HDGCDQKAGPRSL VSTG LRKS + +S MKSLQ VNR++K+R D N EVISRDK DEWMKESVV+IVKNLREAPLFL
Subjt:  MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFL

Query:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC
        R YTT +EDG+ ARFETEKAVEEDRWPILEKQWKSGAAPTPEGI+FV++LE+ D    DGESKAWGIVIQGRGVE GAPVCYLLKTSRAAGLG+WCTHFC
Subjt:  RFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFC

Query:  LVRVKNFRETTKSQLENCWLLQNQ
        LVRVKNFRETTKSQL+NCWL+QNQ
Subjt:  LVRVKNFRETTKSQLENCWLLQNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56360.1 unknown protein5.5e-3943.16Show/hide
Query:  SLGIRCGGN--CGV-LDRR--YVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAP
        S  I CGG   C V  DRR   +N    C      R  + + G++  S   +S   +   + R +  RK G G V+SR+KLD W+++SVV+IVKNLRE+P
Subjt:  SLGIRCGGN--CGV-LDRR--YVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAP

Query:  LFLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDG--------ESKAWGIVIQGRGVECGAPVCYLLKTSRA
        L +  Y  E   G T      KA   + W  +E +W  G   TPEG+I V+KL + D  + D         ++ AWGIV QGRG + G PVCYLLKT+R 
Subjt:  LFLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDG--------ESKAWGIVIQGRGVECGAPVCYLLKTSRA

Query:  -AGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQ
         +G+G  CTHFCLV+VK+FRET  SQL N WL+Q
Subjt:  -AGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQ

AT5G05250.1 unknown protein1.1e-3951.55Show/hide
Query:  RDKLDEWMKESVVDIVKNLREAPLFLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKL---EESDEVEIDG--ESKAWGIVI
        R+KLD WMKESV +IVKNL EAPL +  YT ++E+G      T   ++ + W  ++ +W+ G A  PEGI+FV++L   EES     DG   ++AWG+V+
Subjt:  RDKLDEWMKESVVDIVKNLREAPLFLRFYTTEEEDGKTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKL---EESDEVEIDG--ESKAWGIVI

Query:  QGRGVECGAPVCYLLKTSR-------AAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQN
        QGRGVECG PVCYLLKT+R        +GLG+ CTHFCL +V +FRET++SQL NCWL+ N
Subjt:  QGRGVECGAPVCYLLKTSR-------AAGLGLWCTHFCLVRVKNFRETTKSQLENCWLLQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTTAGGAATTCGATGTGGAGGAAATTGCGGTGTATTAGATCGTCGATATGTGAATCCTCACGACGGATGCGATCAGAAAGCAGGTCCTCGTTCTTTAGTGGT
TTCCACCGGAAGATTAAGGAAATCGAGGAATTACATTTCTGCGATGAAGAGTTTGCAGCCGGTGAATCGTTATATGAAGGAGAGAAAAGATGGCAACGGTGAGGTGATTT
CTCGCGATAAGCTTGATGAATGGATGAAGGAATCGGTGGTTGACATTGTGAAGAATCTTCGAGAAGCACCTCTGTTTTTGCGATTTTACACGACGGAGGAGGAGGATGGA
AAGACGGCGAGATTCGAGACGGAGAAGGCGGTGGAGGAAGATCGTTGGCCGATCTTGGAAAAACAATGGAAAAGCGGAGCAGCACCGACGCCGGAAGGAATCATATTCGT
TCAAAAGCTTGAAGAGAGCGATGAAGTCGAAATCGACGGCGAGTCAAAGGCGTGGGGGATTGTAATACAAGGGAGAGGCGTTGAATGTGGTGCGCCGGTTTGTTACTTGT
TGAAGACGAGTAGAGCGGCGGGGCTAGGGCTATGGTGTACGCATTTCTGTCTGGTTAGGGTTAAGAATTTCAGAGAGACGACCAAATCGCAGCTCGAGAATTGTTGGTTG
CTGCAGAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTTAGGAATTCGATGTGGAGGAAATTGCGGTGTATTAGATCGTCGATATGTGAATCCTCACGACGGATGCGATCAGAAAGCAGGTCCTCGTTCTTTAGTGGT
TTCCACCGGAAGATTAAGGAAATCGAGGAATTACATTTCTGCGATGAAGAGTTTGCAGCCGGTGAATCGTTATATGAAGGAGAGAAAAGATGGCAACGGTGAGGTGATTT
CTCGCGATAAGCTTGATGAATGGATGAAGGAATCGGTGGTTGACATTGTGAAGAATCTTCGAGAAGCACCTCTGTTTTTGCGATTTTACACGACGGAGGAGGAGGATGGA
AAGACGGCGAGATTCGAGACGGAGAAGGCGGTGGAGGAAGATCGTTGGCCGATCTTGGAAAAACAATGGAAAAGCGGAGCAGCACCGACGCCGGAAGGAATCATATTCGT
TCAAAAGCTTGAAGAGAGCGATGAAGTCGAAATCGACGGCGAGTCAAAGGCGTGGGGGATTGTAATACAAGGGAGAGGCGTTGAATGTGGTGCGCCGGTTTGTTACTTGT
TGAAGACGAGTAGAGCGGCGGGGCTAGGGCTATGGTGTACGCATTTCTGTCTGGTTAGGGTTAAGAATTTCAGAGAGACGACCAAATCGCAGCTCGAGAATTGTTGGTTG
CTGCAGAATCAGTAA
Protein sequenceShow/hide protein sequence
MASLGIRCGGNCGVLDRRYVNPHDGCDQKAGPRSLVVSTGRLRKSRNYISAMKSLQPVNRYMKERKDGNGEVISRDKLDEWMKESVVDIVKNLREAPLFLRFYTTEEEDG
KTARFETEKAVEEDRWPILEKQWKSGAAPTPEGIIFVQKLEESDEVEIDGESKAWGIVIQGRGVECGAPVCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLENCWL
LQNQ