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Lsi03G002690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G002690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:3306041..3306298
RNA-Seq ExpressionLsi03G002690
SyntenyLsi03G002690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ15095.1 hypothetical protein Acr_24g0012850 [Actinidia rufa]3.2e-0544.83Show/hide
Query:  KASKLFFVFALILFISVS-SSSARLLRDQSLSAAVSELKLDIP------ADPVAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNS
        K S L     L +F+ +S SSSARLL+D S    + +  +         A+P    SR YGPL L  LPKG +PPSGPSKGTN+ N+
Subjt:  KASKLFFVFALILFISVS-SSSARLLRDQSLSAAVSELKLDIP------ADPVAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNS

KAG6578478.1 hypothetical protein SDJN03_22926, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2684.71Show/hide
Query:  MANLFKASKLFFVFALILFISVSSSSARLLRDQSLSAAVSELKLDIPADPVAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNS
        MA LFK  KLFFVFA+ILFIS SSSSARLLRDQSLSAAV ELKLDIP    AALSREYGPL+LGFLPKG IPPSGPSKGTNDFN+
Subjt:  MANLFKASKLFFVFALILFISVSSSSARLLRDQSLSAAVSELKLDIPADPVAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNS

KAG6602588.1 hypothetical protein SDJN03_07821, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2074.71Show/hide
Query:  MANLFKASKLFFVFALILFISV-SSSSARLLRDQSLS-AAVSELKLDIPADPVAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNS
        MANLFK SK   V ALIL +SV SSSSARLLRD SLS AA+ +LKLD PAD   AL+ EYG LLLGFLPKGGIPPSGPSKGTN+ NS
Subjt:  MANLFKASKLFFVFALILFISV-SSSSARLLRDQSLS-AAVSELKLDIPADPVAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNS

KGN45830.1 hypothetical protein Csa_005505 [Cucumis sativus]3.8e-1974.71Show/hide
Query:  MANLFKASKL-FFVFALILFISVSSSSARLLRDQSLSAAVSELKLDIPADPVAALSREYGPLLLGFLPKGG-IPPSGPSKGTNDFNS
        MANLFK   L FF+F LIL ISVSSSSARLLR QSLS A   LKLDIPADP A    EY  LLLGFLPKGG IPPSGPSKGTN+FN+
Subjt:  MANLFKASKL-FFVFALILFISVSSSSARLLRDQSLSAAVSELKLDIPADPVAALSREYGPLLLGFLPKGG-IPPSGPSKGTNDFNS

XP_021618424.1 uncharacterized protein LOC110619344 [Manihot esculenta]2.0e-0435.71Show/hide
Query:  MANLFKASKLFFVFALILFISVSSSSARLLRD---QSLSAAVSELKLDIPADPV--------------------------------------AALSREYG
        MA  +KA  L   F LI    +SSSSARLL D   Q+L+A+     L +P+D V                                      A L+ +YG
Subjt:  MANLFKASKLFFVFALILFISVSSSSARLLRD---QSLSAAVSELKLDIPADPV--------------------------------------AALSREYG

Query:  PLLLGFLPKGGIPPSGPSKGTNDFNS
        P LL  LPKG +P SGPSKG+ND N+
Subjt:  PLLLGFLPKGGIPPSGPSKGTNDFNS

TrEMBL top hitse value%identityAlignment
A0A0A0K7U2 Uncharacterized protein1.9e-1974.71Show/hide
Query:  MANLFKASKL-FFVFALILFISVSSSSARLLRDQSLSAAVSELKLDIPADPVAALSREYGPLLLGFLPKGG-IPPSGPSKGTNDFNS
        MANLFK   L FF+F LIL ISVSSSSARLLR QSLS A   LKLDIPADP A    EY  LLLGFLPKGG IPPSGPSKGTN+FN+
Subjt:  MANLFKASKL-FFVFALILFISVSSSSARLLRDQSLSAAVSELKLDIPADPVAALSREYGPLLLGFLPKGG-IPPSGPSKGTNDFNS

A0A0B2R0P4 Uncharacterized protein4.9e-0435.04Show/hide
Query:  MANLFKASKLFFVFALILFISVSSSSARLLRDQ----SLSAAVSELKLDIPADPVAA----------------------------LSREYGPLLLGFLPK
        MAN   A+ L     L++F+ ++SSSAR L D+    SL+A    L L +P+D V                                 +YGP++L  LPK
Subjt:  MANLFKASKLFFVFALILFISVSSSSARLLRDQ----SLSAAVSELKLDIPADPVAA----------------------------LSREYGPLLLGFLPK

Query:  GGIPPSGPSKGTNDFNS
        G +PPSGPSKGTN+ N+
Subjt:  GGIPPSGPSKGTNDFNS

A0A151RAC1 Uncharacterized protein1.3e-0440Show/hide
Query:  ILFISVSSSSARLLRDQSLSAAVSE--LKLDIPADPVAALSRE------------------------YGPLLLGFLPKGGIPPSGPSKGTNDFNS
        +L  + SSS AR      L  A +E  L L +P+D V A   E                        YGPL+L  LPKG +PPSGPSKGTNDFN+
Subjt:  ILFISVSSSSARLLRDQSLSAAVSE--LKLDIPADPVAALSRE------------------------YGPLLLGFLPKGGIPPSGPSKGTNDFNS

A0A2C9VLA3 Uncharacterized protein9.9e-0535.71Show/hide
Query:  MANLFKASKLFFVFALILFISVSSSSARLLRD---QSLSAAVSELKLDIPADPV--------------------------------------AALSREYG
        MA  +KA  L   F LI    +SSSSARLL D   Q+L+A+     L +P+D V                                      A L+ +YG
Subjt:  MANLFKASKLFFVFALILFISVSSSSARLLRD---QSLSAAVSELKLDIPADPV--------------------------------------AALSREYG

Query:  PLLLGFLPKGGIPPSGPSKGTNDFNS
        P LL  LPKG +P SGPSKG+ND N+
Subjt:  PLLLGFLPKGGIPPSGPSKGTNDFNS

A0A7J0GW62 Uncharacterized protein1.5e-0544.83Show/hide
Query:  KASKLFFVFALILFISVS-SSSARLLRDQSLSAAVSELKLDIP------ADPVAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNS
        K S L     L +F+ +S SSSARLL+D S    + +  +         A+P    SR YGPL L  LPKG +PPSGPSKGTN+ N+
Subjt:  KASKLFFVFALILFISVS-SSSARLLRDQSLSAAVSELKLDIP------ADPVAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATCTCTTCAAAGCCTCAAAATTGTTCTTTGTCTTTGCTCTGATTCTTTTCATCTCTGTTTCTTCTTCTTCGGCCAGATTGTTGCGCGATCAATCTCTTTCCGC
CGCCGTGTCGGAGTTGAAACTTGATATTCCGGCGGATCCGGTGGCGGCTCTGTCGAGGGAGTATGGGCCTCTGCTTCTTGGGTTTCTGCCAAAAGGAGGAATTCCGCCGT
CGGGACCGAGCAAAGGAACCAACGATTTCAACAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATCTCTTCAAAGCCTCAAAATTGTTCTTTGTCTTTGCTCTGATTCTTTTCATCTCTGTTTCTTCTTCTTCGGCCAGATTGTTGCGCGATCAATCTCTTTCCGC
CGCCGTGTCGGAGTTGAAACTTGATATTCCGGCGGATCCGGTGGCGGCTCTGTCGAGGGAGTATGGGCCTCTGCTTCTTGGGTTTCTGCCAAAAGGAGGAATTCCGCCGT
CGGGACCGAGCAAAGGAACCAACGATTTCAACAGTTGA
Protein sequenceShow/hide protein sequence
MANLFKASKLFFVFALILFISVSSSSARLLRDQSLSAAVSELKLDIPADPVAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNS