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Lsi03G002950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G002950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:3596143..3599173
RNA-Seq ExpressionLsi03G002950
SyntenyLsi03G002950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578457.1 LOB domain-containing protein 21, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1390Show/hide
Query:  MVEIVLACTKGAFSSKATSLDRRISGCSRDPEGKKPEEAAIIGERATSMA
        MVEIVLACTKG FSSKATSLDRRI+ CSRDPEGK+ EEAAIIGERATSMA
Subjt:  MVEIVLACTKGAFSSKATSLDRRISGCSRDPEGKKPEEAAIIGERATSMA

KAG7016021.1 hypothetical protein SDJN02_21125 [Cucurbita argyrosperma subsp. argyrosperma]4.4e-1951.91Show/hide
Query:  IARLNNAVTAFSSILGSPDFNNVTKNGIAPASAIILRCKLSHQKLGCHFDSVGGCFGCRNVIDRFLGMKARSLILLRMVEIVLACTKGAFSSKATSLDRR
        IARLNNAVTAFSSILGSPDFN+VT+N                                                       VLACTKG FSSKATSLDRR
Subjt:  IARLNNAVTAFSSILGSPDFNNVTKNGIAPASAIILRCKLSHQKLGCHFDSVGGCFGCRNVIDRFLGMKARSLILLRMVEIVLACTKGAFSSKATSLDRR

Query:  ISGCSRDPEGKKPEEAAIIGERATSMAILTP
        I+ CSRDPEGK+ EEAAIIGERATSMA LTP
Subjt:  ISGCSRDPEGKKPEEAAIIGERATSMAILTP

PON79010.1 hypothetical protein PanWU01x14_015110 [Parasponia andersonii]9.7e-2760.54Show/hide
Query:  SPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFS
        SPSEQP++      ASSVM ALSS+N S   GTAPATT  +L AL    L+ AVAAS  PA  PS RS T+AG+A G API  L SS M RL I AAAF 
Subjt:  SPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFS

Query:  LASIVFPDSKMCVMLSIAPAATMRILLLLKIARLNNAVTAFSSILGS
        LAS+V PDS+  + LS+APAA +R LLLLK+ RL++AVTAFS ILGS
Subjt:  LASIVFPDSKMCVMLSIAPAATMRILLLLKIARLNNAVTAFSSILGS

PON86564.1 hypothetical protein TorRG33x02_176120 [Trema orientale]4.0e-2862.59Show/hide
Query:  SPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFS
        SPSEQP++      ASSVM ALSS+N S S GTAPATT  +L AL    L+ AVAAS  PA  PSLRS T+AG+A G API  L SS M RL I AAAFS
Subjt:  SPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFS

Query:  LASIVFPDSKMCVMLSIAPAATMRILLLLKIARLNNAVTAFSSILGS
        LAS+V PDS+  + LS+APAA +R LLLLK+ RL++AVTAFS ILGS
Subjt:  LASIVFPDSKMCVMLSIAPAATMRILLLLKIARLNNAVTAFSSILGS

TrEMBL top hitse value%identityAlignment
A0A0A9CHU2 Uncharacterized protein9.9e-0946.62Show/hide
Query:  PATTIQALL----ALLQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFSLASIVFPDSKMCVMLSIAPAATMRILLLLKIARL
        PA T + LL      L+ AVAAS  P   PS R + + G+A  L PIV L SST  +L  VAAAFSLAS++ P      +L IA   TM  LL   + RL
Subjt:  PATTIQALL----ALLQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFSLASIVFPDSKMCVMLSIAPAATMRILLLLKIARL

Query:  NNAVTAFSSILGSPDFNNVTKNGIAPASAIILR
         +AVTA S +LGS D + +T  G+APASA+ +R
Subjt:  NNAVTAFSSILGSPDFNNVTKNGIAPASAIILR

A0A2P5E0E6 Uncharacterized protein4.7e-2760.54Show/hide
Query:  SPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFS
        SPSEQP++      ASSVM ALSS+N S   GTAPATT  +L AL    L+ AVAAS  PA  PS RS T+AG+A G API  L SS M RL I AAAF 
Subjt:  SPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFS

Query:  LASIVFPDSKMCVMLSIAPAATMRILLLLKIARLNNAVTAFSSILGS
        LAS+V PDS+  + LS+APAA +R LLLLK+ RL++AVTAFS ILGS
Subjt:  LASIVFPDSKMCVMLSIAPAATMRILLLLKIARLNNAVTAFSSILGS

A0A2P5ELY7 Uncharacterized protein1.9e-2862.59Show/hide
Query:  SPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFS
        SPSEQP++      ASSVM ALSS+N S S GTAPATT  +L AL    L+ AVAAS  PA  PSLRS T+AG+A G API  L SS M RL I AAAFS
Subjt:  SPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYIVAAAFS

Query:  LASIVFPDSKMCVMLSIAPAATMRILLLLKIARLNNAVTAFSSILGS
        LAS+V PDS+  + LS+APAA +R LLLLK+ RL++AVTAFS ILGS
Subjt:  LASIVFPDSKMCVMLSIAPAATMRILLLLKIARLNNAVTAFSSILGS

A0A7C9EM36 Uncharacterized protein7.3e-0439.08Show/hide
Query:  SCGGTFSPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYI
        SC     P   P    S   A S M    S   +    TAPA T  +L +L    L S V AS FP   P +RS T+ GMA   AP+V L SS+M RL  
Subjt:  SCGGTFSPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLAL----LQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVILNSSTMVRLYI

Query:  VAAAFSLASIVFPDSKMCVMLSIAP-AATMRILLLLKIARLNNAVTAFSSILGSPDFNNVTKNGIAPASAIILR
         AAAF    +  P     +   IAP A+ + ILL     RL  AVTA S + GS      T+ G+AP SAI  R
Subjt:  VAAAFSLASIVFPDSKMCVMLSIAP-AATMRILLLLKIARLNNAVTAFSSILGSPDFNNVTKNGIAPASAIILR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATTCAATATCAATGCCAGTTGGCTCTGAATTGCAAGTTGAGGTTGCAGAGTTCTTGTGGAGGAACGTTCAGCCCTTCTGAGCAACCCAAAACCAGGGAG
AGCGCCTGCAAGGCGTCATCTGTTATGCCTGCCTTGTCATCTGTCAACAAGTCAATCAGCAATGGCACTGCCCCAGCTACTACAATACAAGCTTTGTTGGCACTA
TTGCAAAGTGCAGTGGCAGCATCTCGTTTCCCAGCTGAATGGCCTTCTTTAAGGAGCCTCACCAATGCTGGTATGGCTTTCGGACTTGCTCCTATTGTTATTTTG
AACTCATCCACCATGGTTAGGCTATATATTGTTGCTGCAGCATTTTCTCTTGCTTCCATTGTTTTCCCTGATTCTAAGATGTGTGTTATGTTGTCTATTGCCCCT
GCTGCCACTATGAGGATCTTGTTGTTGTTGAAGATTGCAAGGTTGAACAATGCAGTCACTGCATTTTCTTCAATCCTTGGATCGCCGGATTTCAACAATGTTACT
AAAAACGGTATTGCTCCTGCTTCGGCAATCATCCTTCGTTGCAAGCTTTCCCACCAGAAACTCGGCTGTCATTTTGACAGCGTCGGAGGCTGCTTTGGATGCAGA
AATGTGATCGACCGGTTCCTCGGAATGAAAGCAAGAAGCTTGATTCTTCTTCGCATGGTTGAGATAGTCTTAGCCTGCACAAAAGGAGCCTTCTCTTCAAAAGCA
ACTTCATTGGATAGGAGAATCAGTGGTTGCAGCAGAGACCCAGAAGGCAAAAAGCCTGAAGAAGCTGCCATCATTGGGGAAAGAGCAACATCCATGGCCATTCTC
ACTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATTCAATATCAATGCCAGTTGGCTCTGAATTGCAAGTTGAGGTTGCAGAGTTCTTGTGGAGGAACGTTCAGCCCTTCTGAGCAACCCAAAACCAGGGAG
AGCGCCTGCAAGGCGTCATCTGTTATGCCTGCCTTGTCATCTGTCAACAAGTCAATCAGCAATGGCACTGCCCCAGCTACTACAATACAAGCTTTGTTGGCACTA
TTGCAAAGTGCAGTGGCAGCATCTCGTTTCCCAGCTGAATGGCCTTCTTTAAGGAGCCTCACCAATGCTGGTATGGCTTTCGGACTTGCTCCTATTGTTATTTTG
AACTCATCCACCATGGTTAGGCTATATATTGTTGCTGCAGCATTTTCTCTTGCTTCCATTGTTTTCCCTGATTCTAAGATGTGTGTTATGTTGTCTATTGCCCCT
GCTGCCACTATGAGGATCTTGTTGTTGTTGAAGATTGCAAGGTTGAACAATGCAGTCACTGCATTTTCTTCAATCCTTGGATCGCCGGATTTCAACAATGTTACT
AAAAACGGTATTGCTCCTGCTTCGGCAATCATCCTTCGTTGCAAGCTTTCCCACCAGAAACTCGGCTGTCATTTTGACAGCGTCGGAGGCTGCTTTGGATGCAGA
AATGTGATCGACCGGTTCCTCGGAATGAAAGCAAGAAGCTTGATTCTTCTTCGCATGGTTGAGATAGTCTTAGCCTGCACAAAAGGAGCCTTCTCTTCAAAAGCA
ACTTCATTGGATAGGAGAATCAGTGGTTGCAGCAGAGACCCAGAAGGCAAAAAGCCTGAAGAAGCTGCCATCATTGGGGAAAGAGCAACATCCATGGCCATTCTC
ACTCCATGA
Protein sequenceShow/hide protein sequence
MGIQYQCQLALNCKLRLQSSCGGTFSPSEQPKTRESACKASSVMPALSSVNKSISNGTAPATTIQALLALLQSAVAASRFPAEWPSLRSLTNAGMAFGLAPIVIL
NSSTMVRLYIVAAAFSLASIVFPDSKMCVMLSIAPAATMRILLLLKIARLNNAVTAFSSILGSPDFNNVTKNGIAPASAIILRCKLSHQKLGCHFDSVGGCFGCR
NVIDRFLGMKARSLILLRMVEIVLACTKGAFSSKATSLDRRISGCSRDPEGKKPEEAAIIGERATSMAILTP