; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G003200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G003200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFAS1 domain-containing protein
Genome locationchr03:3864329..3865759
RNA-Seq ExpressionLsi03G003200
SyntenyLsi03G003200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000782 - FAS1 domain
IPR036378 - FAS1 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016003.1 hypothetical protein SDJN02_21107 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-9687.11Show/hide
Query:  SKSGSDSGCPNRNFMLPITQLQLTEPKMKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLP
        S+ GSD GC NRNF+L I QLQ TE +MKR+FILKNPIAF FMILSLC +LIVLITTLRLPELTVG KAVASN  SV IRKVPKD+KLGKFGEMMI+MLP
Subjt:  SKSGSDSGCPNRNFMLPITQLQLTEPKMKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLP

Query:  KDLAFTVFIPSEKAFERELNLRVNASFTSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKD
        KDLAFTVFIPSEKAF+REL+LRVN S T TEKLDDTYAVISRILGFSAVPRTIYST +DYGNEISYDAVSGFTL+ISKDRDGMLIVNRVRSE VDIKKKD
Subjt:  KDLAFTVFIPSEKAFERELNLRVNASFTSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKD

Query:  VLVHIMDGVIMDAAFEQSVKPDDSE
        VLVHIMDGVIMDAAFEQSVKPDDSE
Subjt:  VLVHIMDGVIMDAAFEQSVKPDDSE

XP_022939922.1 uncharacterized protein LOC111445644 [Cucurbita moschata]3.3e-8690.95Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF
        MKR+FILKNPIAF FMILSLC ILIVLITTLRLPELTVG KAVASN  SV IRKVPKD KLGKFGEMMI+MLPKDLAFTVFIPSEKAFEREL+L+VN S 
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF

Query:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
        T TEKLDDTY VISRILGFSAVPRTIYSTS+DYGNEISYDAVSGFTL+ISKDRDGMLIVNRVRSE VDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
Subjt:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED

XP_022993525.1 uncharacterized protein LOC111489506 [Cucurbita maxima]1.7e-8589.95Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF
        MKR+FILKNPIAF FMILSLC ILIVLITTLRLPELTVG KAVASN  SV IRK+PKD KLGKFGEMMI+MLPKDLAFTVFIPSEKAFEREL+LRVN S 
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF

Query:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
        T TEKLDDTYAVISRILGFSAVPRTIYSTS+DYGNEISYDAVSGFTL+ISKDRDGMLIVNRVRSE VD+KKKDVLVH+MDGVIMDAAFEQSVKPD SED
Subjt:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED

XP_023549508.1 uncharacterized protein LOC111807988 [Cucurbita pepo subsp. pepo]1.4e-8790.95Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF
        MKR+FILKNPIAF FMILSLC ILIVLITTLRLPELTVG KAVASN  SV IRKVPKD+KLGKFGEMMI+MLPKDLAFTVFIPSEKAFEREL+LRVN S 
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF

Query:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
        T TEKLDDTYAVISRILGFSAVPRT+YSTS+DYGNEISYDAVSGFTL+ISKD+DGMLIVNRVRSEMVD+KKKDVLVHIMDGVIMDAAFEQSVKPDDSED
Subjt:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED

XP_038886576.1 uncharacterized protein LOC120076746 [Benincasa hispida]1.8e-8488.44Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF
        MK+ FILKNPIAF FMILSLC ILIVLITTLRLPELTVGVKAVAS+  SV IRKVPK  KLGKFGEMMI+MLPKDL FTVF+PSE AFER LNLRVN SF
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF

Query:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
        TSTEKLDDTYAV SRILGFSAVPRTIYST +DYGNEISYDAVSGFTL+I KDRDGMLIVN VRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDD+ED
Subjt:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED

TrEMBL top hitse value%identityAlignment
A0A0A0K8H5 FAS1 domain-containing protein9.2e-8284.92Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF
        MKR+FILKNPIAF FMILSLC +LIVLITTLRLPELTVGVKA A +  S LIRKV KD +LGKFGEMMI MLP+DLAFTVFIPSEKAFEREL+LRVN SF
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF

Query:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
        TSTEK+DDTYAVISRILGFSAVPRTIYST +DYG+EI YDAVSGFTL+ISKDR+G L+VN VRSEMVD+KKKDVLVHIMDGVIMDA+FEQSVKPDD+ED
Subjt:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED

A0A1S3B3H1 uncharacterized protein LOC1034855595.4e-8285.43Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF
        MKR+FILKNPIAF FMILSLC +LIVLITTLRLPELTVG K  A +  S LIRKV KD KLGKFGEMMI MLP+DLAFTVFIPSEKAFEREL+LRVN SF
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF

Query:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
        TSTEK+DDTYAVISRILGFSAVPRTIYST +DYG+EISYDAVSGFTL+ISKDRDG L+VN VRSEMVD+KKK VLVHIMDGVIMDAAFEQSVKPDD+ED
Subjt:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED

A0A6J1BWY4 uncharacterized protein LOC1110060891.7e-8082.91Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF
        MK++FI+KNPIAFGFMILS+C ILIVLI+TLRLPELTVGV AV         RKVPKD KLGKFGEMMI+MLPKDLAFTVF+PSEKAFEREL+L+VN SF
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF

Query:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
        T TEK DDTYAVISR+LGFSAVPR IYS+ +DYG EISYDAVSGFTL+ISKDRDGMLIVNRVRSEMVDIKKKD++VHIMDGVIMDA FEQSVKPDDSED
Subjt:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED

A0A6J1FI64 uncharacterized protein LOC1114456441.6e-8690.95Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF
        MKR+FILKNPIAF FMILSLC ILIVLITTLRLPELTVG KAVASN  SV IRKVPKD KLGKFGEMMI+MLPKDLAFTVFIPSEKAFEREL+L+VN S 
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF

Query:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
        T TEKLDDTY VISRILGFSAVPRTIYSTS+DYGNEISYDAVSGFTL+ISKDRDGMLIVNRVRSE VDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
Subjt:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED

A0A6J1JYR8 uncharacterized protein LOC1114895068.0e-8689.95Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF
        MKR+FILKNPIAF FMILSLC ILIVLITTLRLPELTVG KAVASN  SV IRK+PKD KLGKFGEMMI+MLPKDLAFTVFIPSEKAFEREL+LRVN S 
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASF

Query:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED
        T TEKLDDTYAVISRILGFSAVPRTIYSTS+DYGNEISYDAVSGFTL+ISKDRDGMLIVNRVRSE VD+KKKDVLVH+MDGVIMDAAFEQSVKPD SED
Subjt:  TSTEKLDDTYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G55820.1 Fasciclin-like arabinogalactan family protein5.4e-3441.83Show/hide
Query:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNAS-
        MK+   LKNP+ F F+++++ S+ I++ + L+LPE       +A+ N    +R    D +LG FG+MMI MLP+DL FT F+PSEK+F R+L L++N S 
Subjt:  MKRTFILKNPIAFGFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNAS-

Query:  -FTSTEKLDD---TYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRD-GMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSV--
           S E+ DD   TYAV+SRI+ F+ VP  +    +      SY+++SGFTL I + R+ G L+VN V +E + +K+  ++VHIM+GV+MD+ F QS+  
Subjt:  -FTSTEKLDD---TYAVISRILGFSAVPRTIYSTSMDYGNEISYDAVSGFTLHISKDRD-GMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSV--

Query:  -KPDDSED
          P D +D
Subjt:  -KPDDSED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTGGGCTAACGGCCCACTTTAGAGTGGCCCAAAGCCCATTTCAGATTCGGCGCAGAGGCCATTCCGAGCATCGTAGGACCATGGTGGTGCAGGATTTGAAGCT
TCAAAACGGCGTCGTCTTTCTACGAGTTTGCTCTACACTTCGTTGTCTTTCCATTAATTTCTTCTCTGATCTAGTGGGGCTTCGGATCCCGTGGATCTCCTCTAAATCCG
GTTCAGACTCTGGCTGTCCGAATCGGAATTTCATGCTTCCCATTACTCAGCTTCAGCTTACTGAACCGAAGATGAAGAGGACCTTCATTTTAAAGAACCCAATTGCCTTT
GGTTTTATGATTCTATCTCTTTGTTCCATACTTATTGTACTCATCACAACGCTAAGACTTCCAGAGCTAACTGTAGGAGTTAAGGCTGTAGCCAGTAATAATGGTTCAGT
ACTGATCAGAAAGGTTCCCAAAGATTATAAGTTAGGCAAGTTTGGAGAGATGATGATTAGAATGTTGCCTAAGGATCTTGCTTTTACTGTGTTCATACCTTCGGAGAAGG
CTTTCGAGCGTGAATTGAATTTACGAGTGAACGCAAGTTTCACAAGTACTGAGAAGTTGGACGACACATACGCCGTGATTTCGAGAATATTAGGTTTCTCTGCTGTTCCT
CGAACTATTTATTCGACGTCCATGGATTACGGGAATGAGATTTCATATGATGCTGTTTCTGGATTCACATTGCACATTTCCAAGGACAGAGATGGGATGCTGATTGTTAA
CAGGGTGAGGTCTGAAATGGTGGATATAAAGAAGAAGGATGTTCTTGTGCATATAATGGATGGTGTTATAATGGATGCTGCATTTGAGCAATCAGTAAAACCTGATGACA
GTGAAGAT
mRNA sequenceShow/hide mRNA sequence
AATGATAATTGGGCTAACGGCCCACTTTAGAGTGGCCCAAAGCCCATTTCAGATTCGGCGCAGAGGCCATTCCGAGCATCGTAGGACCATGGTGGTGCAGGATTTGAAGC
TTCAAAACGGCGTCGTCTTTCTACGAGTTTGCTCTACACTTCGTTGTCTTTCCATTAATTTCTTCTCTGATCTAGTGGGGCTTCGGATCCCGTGGATCTCCTCTAAATCC
GGTTCAGACTCTGGCTGTCCGAATCGGAATTTCATGCTTCCCATTACTCAGCTTCAGCTTACTGAACCGAAGATGAAGAGGACCTTCATTTTAAAGAACCCAATTGCCTT
TGGTTTTATGATTCTATCTCTTTGTTCCATACTTATTGTACTCATCACAACGCTAAGACTTCCAGAGCTAACTGTAGGAGTTAAGGCTGTAGCCAGTAATAATGGTTCAG
TACTGATCAGAAAGGTTCCCAAAGATTATAAGTTAGGCAAGTTTGGAGAGATGATGATTAGAATGTTGCCTAAGGATCTTGCTTTTACTGTGTTCATACCTTCGGAGAAG
GCTTTCGAGCGTGAATTGAATTTACGAGTGAACGCAAGTTTCACAAGTACTGAGAAGTTGGACGACACATACGCCGTGATTTCGAGAATATTAGGTTTCTCTGCTGTTCC
TCGAACTATTTATTCGACGTCCATGGATTACGGGAATGAGATTTCATATGATGCTGTTTCTGGATTCACATTGCACATTTCCAAGGACAGAGATGGGATGCTGATTGTTA
ACAGGGTGAGGTCTGAAATGGTGGATATAAAGAAGAAGGATGTTCTTGTGCATATAATGGATGGTGTTATAATGGATGCTGCATTTGAGCAATCAGTAAAACCTGATGAC
AGTGAAGAT
Protein sequenceShow/hide protein sequence
MIIGLTAHFRVAQSPFQIRRRGHSEHRRTMVVQDLKLQNGVVFLRVCSTLRCLSINFFSDLVGLRIPWISSKSGSDSGCPNRNFMLPITQLQLTEPKMKRTFILKNPIAF
GFMILSLCSILIVLITTLRLPELTVGVKAVASNNGSVLIRKVPKDYKLGKFGEMMIRMLPKDLAFTVFIPSEKAFERELNLRVNASFTSTEKLDDTYAVISRILGFSAVP
RTIYSTSMDYGNEISYDAVSGFTLHISKDRDGMLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAAFEQSVKPDDSED