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Lsi03G003290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G003290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:3946179..3951601
RNA-Seq ExpressionLsi03G003290
SyntenyLsi03G003290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP48720.1 hypothetical protein KK1_029609, partial [Cajanus cajan]6.7e-3054.14Show/hide
Query:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS
        YPAGND+ GDD  E  + EP L L+G +VS++ GE+ GGG++ LVE DG++A+R+V +D+GDAE++AEGGDL+EL   +  L  N L+P + +VAE+   
Subjt:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS

Query:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVP
         HVAHGEE+ VLE +V EQ+LV+Q++ NVGGVP
Subjt:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVP

KYP67713.1 hypothetical protein KK1_024064, partial [Cajanus cajan]4.1e-1945.71Show/hide
Query:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS
        YP GN +  ++R +R +SEP L L G  VS+  GE+ GGG++ LV+ D  + KR+V  D+G+AE+ AE  DL EL   +  LERN     + +VAE    
Subjt:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS

Query:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADR
         HV  GEED   E +VGEQ+LVE+E+++VG VP  + ADR
Subjt:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADR

KYP75902.1 hypothetical protein KK1_020110, partial [Cajanus cajan]3.5e-3960.67Show/hide
Query:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS
        YPAGND+P DDRNE  I EPSL L+ H+VSKN GE+  GG+NSLVER+ K+AKRNV K NGDAE++A+  DL+EL+  SN L+R+ L P   +V EQ T 
Subjt:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS

Query:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREETTRTLHVG
        GHVAHGEE+ VLE +V EQ+LV+Q+++NVGGVP G++  RE+  RTLH G
Subjt:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREETTRTLHVG

PON87575.1 hypothetical protein TorRG33x02_165680 [Trema orientale]3.9e-3859.26Show/hide
Query:  QSSYPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQ
        +SSYPA +++ G++RNE +I EP L  +GH V K+ GE+R GG NSLVERD +I +RNV++ +GD ED+AE  DLKEL+ RSN L R+ LQP   +VAEQ
Subjt:  QSSYPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQ

Query:  RTSGHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREETTRTLHVGRWVLRKRLR
         TSGHVAHGEEDRVLE IV +Q      + NVGGVP GN+ DRE+T  TLH+ RWVL  RLR
Subjt:  RTSGHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREETTRTLHVGRWVLRKRLR

RRT55438.1 hypothetical protein B296_00027044 [Ensete ventricosum]2.6e-2648.25Show/hide
Query:  SYPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRT
        +YPAG+D+ GD+R+E +I  P L L GH++ ++ GE+  G  + L+ER+ ++ +R+V  ++  AED+AE GDL+EL  RS+ L R+  QP   +VAEQR 
Subjt:  SYPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRT

Query:  SGHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREE
          HVAHGEEDRVLE+IV +++LVEQ++ N+GGVP  ++  RE+
Subjt:  SGHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREE

TrEMBL top hitse value%identityAlignment
A0A151S1P4 Uncharacterized protein (Fragment)3.2e-3054.14Show/hide
Query:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS
        YPAGND+ GDD  E  + EP L L+G +VS++ GE+ GGG++ LVE DG++A+R+V +D+GDAE++AEGGDL+EL   +  L  N L+P + +VAE+   
Subjt:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS

Query:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVP
         HVAHGEE+ VLE +V EQ+LV+Q++ NVGGVP
Subjt:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVP

A0A151U9F0 Uncharacterized protein (Fragment)1.7e-3960.67Show/hide
Query:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS
        YPAGND+P DDRNE  I EPSL L+ H+VSKN GE+  GG+NSLVER+ K+AKRNV K NGDAE++A+  DL+EL+  SN L+R+ L P   +V EQ T 
Subjt:  YPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTS

Query:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREETTRTLHVG
        GHVAHGEE+ VLE +V EQ+LV+Q+++NVGGVP G++  RE+  RTLH G
Subjt:  GHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREETTRTLHVG

A0A2P5EQ19 Uncharacterized protein1.9e-3859.26Show/hide
Query:  QSSYPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQ
        +SSYPA +++ G++RNE +I EP L  +GH V K+ GE+R GG NSLVERD +I +RNV++ +GD ED+AE  DLKEL+ RSN L R+ LQP   +VAEQ
Subjt:  QSSYPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQ

Query:  RTSGHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREETTRTLHVGRWVLRKRLR
         TSGHVAHGEEDRVLE IV +Q      + NVGGVP GN+ DRE+T  TLH+ RWVL  RLR
Subjt:  RTSGHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREETTRTLHVGRWVLRKRLR

A0A426YUN5 Uncharacterized protein1.3e-2648.25Show/hide
Query:  SYPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRT
        +YPAG+D+ GD+R+E +I  P L L GH++ ++ GE+  G  + L+ER+ ++ +R+V  ++  AED+AE GDL+EL  RS+ L R+  QP   +VAEQR 
Subjt:  SYPAGNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRT

Query:  SGHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREE
          HVAHGEEDRVLE+IV +++LVEQ++ N+GGVP  ++  RE+
Subjt:  SGHVAHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREE

T1MFN7 Uncharacterized protein2.9e-3153.24Show/hide
Query:  GNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTSGHV
        G+D+ GDD +E  + +P L L GH V ++ GE+RGGG++SL+E DG++A+R+V  D+G AED+AE GDL EL+ R++ L  +  +P +  V E+R  GHV
Subjt:  GNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTSGHV

Query:  AHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREE
        AHGEED VLE +V E++LVEQE+++VGGVPGG+E  REE
Subjt:  AHGEEDRVLETIVGEQILVEQENSNVGGVPGGNEADREE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGACCAATATATGTGGAGATGAGGAATTCGAATATTTTGACATTTTGCTACAGCCCCTTTTGCATTTCCTAGTACCTGAAAGAGACAGAAAACGGATG
AGAATTCTTAGAAAGTTCAGTAGTCAATCTCAAAGCAACCAGGAACATATAAAGCATATTCTGAACAGTAGCAAGCATCAGCACACAACAAAAATGGAAATATAC
CTGAAGGGTCAGCGCACTGGTGTTTTTCGTGACCAGAAAATTGGTCAGAACGAAATGAAAGCAGATAAGAAATTGACAAACATATCACAGAGTTCATACCCCGCT
GGCAATGACAACCCCGGTGACGACAGGAATGAGCGTAATATAAGTGAGCCAAGCCTCTCTCTTCAAGGTCATCAGGTAAGCAAAAACAGCGGTGAAAAAAGGGGT
GGTGGCTCCAATAGCTTGGTTGAAAGAGACGGGAAGATAGCGAAGCGAAATGTTACCAAAGACAACGGAGATGCAGAAGATAAAGCTGAGGGCGGAGATCTTAAA
GAATTGAACACGAGATCGAATAGTCTGGAGAGGAACAAGCTTCAACCAAGCAATTGCAACGTAGCTGAGCAAAGAACAAGCGGTCATGTGGCACATGGTGAGGAA
GATCGGGTACTTGAAACCATAGTTGGTGAGCAAATACTTGTTGAGCAAGAGAACTCCAATGTTGGAGGAGTACCAGGCGGCAACGAGGCCGATCGTGAAGAAACG
ACTCGTACCCTTCATGTTGGGAGATGGGTGTTGAGGAAAAGGCTGAGGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGACCAATATATGTGGAGATGAGGAATTCGAATATTTTGACATTTTGCTACAGCCCCTTTTGCATTTCCTAGTACCTGAAAGAGACAGAAAACGGATG
AGAATTCTTAGAAAGTTCAGTAGTCAATCTCAAAGCAACCAGGAACATATAAAGCATATTCTGAACAGTAGCAAGCATCAGCACACAACAAAAATGGAAATATAC
CTGAAGGGTCAGCGCACTGGTGTTTTTCGTGACCAGAAAATTGGTCAGAACGAAATGAAAGCAGATAAGAAATTGACAAACATATCACAGAGTTCATACCCCGCT
GGCAATGACAACCCCGGTGACGACAGGAATGAGCGTAATATAAGTGAGCCAAGCCTCTCTCTTCAAGGTCATCAGGTAAGCAAAAACAGCGGTGAAAAAAGGGGT
GGTGGCTCCAATAGCTTGGTTGAAAGAGACGGGAAGATAGCGAAGCGAAATGTTACCAAAGACAACGGAGATGCAGAAGATAAAGCTGAGGGCGGAGATCTTAAA
GAATTGAACACGAGATCGAATAGTCTGGAGAGGAACAAGCTTCAACCAAGCAATTGCAACGTAGCTGAGCAAAGAACAAGCGGTCATGTGGCACATGGTGAGGAA
GATCGGGTACTTGAAACCATAGTTGGTGAGCAAATACTTGTTGAGCAAGAGAACTCCAATGTTGGAGGAGTACCAGGCGGCAACGAGGCCGATCGTGAAGAAACG
ACTCGTACCCTTCATGTTGGGAGATGGGTGTTGAGGAAAAGGCTGAGGCTGTGA
Protein sequenceShow/hide protein sequence
MNLTNICGDEEFEYFDILLQPLLHFLVPERDRKRMRILRKFSSQSQSNQEHIKHILNSSKHQHTTKMEIYLKGQRTGVFRDQKIGQNEMKADKKLTNISQSSYPA
GNDNPGDDRNERNISEPSLSLQGHQVSKNSGEKRGGGSNSLVERDGKIAKRNVTKDNGDAEDKAEGGDLKELNTRSNSLERNKLQPSNCNVAEQRTSGHVAHGEE
DRVLETIVGEQILVEQENSNVGGVPGGNEADREETTRTLHVGRWVLRKRLRL