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Lsi03G003310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G003310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTPT domain-containing protein
Genome locationchr03:3952993..3954648
RNA-Seq ExpressionLsi03G003310
SyntenyLsi03G003310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138435.3 probable sugar phosphate/phosphate translocator At3g11320 [Cucumis sativus]1.2e-1772.46Show/hide
Query:  RKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVR
        R+QRW KK+IC SRQHVW +S L   +S SGFRK RASNSTAGSYGGSAEISKGQP  W+STWP+KQ +
Subjt:  RKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVR

XP_016899401.1 PREDICTED: uncharacterized protein LOC107990500 [Cucumis melo]3.9e-2158.56Show/hide
Query:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVRTSKLQSPISLPFPHHYASQILIPFSKVNS
        +ER+QRW KK+IC SRQHVW ES L   +S  GFRKFRASNSTAGSYGGSAEISKGQP PW+STWP+K                     Q+L+PFSKVNS
Subjt:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVRTSKLQSPISLPFPHHYASQILIPFSKVNS

Query:  IKFAYPTLLSN
         KF    +L N
Subjt:  IKFAYPTLLSN

XP_022133939.1 probable sugar phosphate/phosphate translocator At3g11320 isoform X1 [Momordica charantia]2.4e-2386.96Show/hide
Query:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQ
        ++RKQRWSK LICSSRQHV  ESSLFKSRSKSGFRKFRAS+STAGSYGGSAEISKGQP PWLSTWP+ Q
Subjt:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQ

XP_022133940.1 probable sugar phosphate/phosphate translocator At3g11320 isoform X2 [Momordica charantia]1.4e-2384Show/hide
Query:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVRTSKL
        ++RKQRWSK LICSSRQHV  ESSLFKSRSKSGFRKFRAS+STAGSYGGSAEISKGQP PWLSTWP+ Q  TS+L
Subjt:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVRTSKL

XP_038886606.1 probable sugar phosphate/phosphate translocator At3g11320 [Benincasa hispida]8.1e-2791.3Show/hide
Query:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQ
        +E++QRWSKKLICSSRQHVW ESSLFKSRSKSGFRKFRASNS+AGSYGGSAEISKGQPAPW+STWPSKQ
Subjt:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQ

TrEMBL top hitse value%identityAlignment
A0A0A0K8G8 TPT domain-containing protein5.6e-1872.46Show/hide
Query:  RKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVR
        R+QRW KK+IC SRQHVW +S L   +S SGFRK RASNSTAGSYGGSAEISKGQP  W+STWP+KQ +
Subjt:  RKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVR

A0A1S4DTT2 uncharacterized protein LOC1079905001.9e-2158.56Show/hide
Query:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVRTSKLQSPISLPFPHHYASQILIPFSKVNS
        +ER+QRW KK+IC SRQHVW ES L   +S  GFRKFRASNSTAGSYGGSAEISKGQP PW+STWP+K                     Q+L+PFSKVNS
Subjt:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVRTSKLQSPISLPFPHHYASQILIPFSKVNS

Query:  IKFAYPTLLSN
         KF    +L N
Subjt:  IKFAYPTLLSN

A0A6J1BWM6 probable sugar phosphate/phosphate translocator At3g11320 isoform X26.9e-2484Show/hide
Query:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVRTSKL
        ++RKQRWSK LICSSRQHV  ESSLFKSRSKSGFRKFRAS+STAGSYGGSAEISKGQP PWLSTWP+ Q  TS+L
Subjt:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVRTSKL

A0A6J1BXD2 probable sugar phosphate/phosphate translocator At3g11320 isoform X11.2e-2386.96Show/hide
Query:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQ
        ++RKQRWSK LICSSRQHV  ESSLFKSRSKSGFRKFRAS+STAGSYGGSAEISKGQP PWLSTWP+ Q
Subjt:  DERKQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQ

A0A6J1HBA6 probable sugar phosphate/phosphate translocator At3g11320 isoform X13.4e-1571.83Show/hide
Query:  DERKQRWSKKLIC-SSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQV
        +ERKQ W +KLIC SS QHV   SSLFKSRSKSG RK R    TAGS GGSAEI +GQPAPWLSTWP+KQ+
Subjt:  DERKQRWSKKLIC-SSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTGGGTTCCAATTCCTCTGCCTCCCTGCTATGTAATGTTCATAAACACAACTTGTAAAGCCAAGGAAAGGAGTTTGAAATCGACATCGTTTTTGTCCTTTCAATT
AATAACCAAACCATCCGAACTCGAAAAGACTGCCACTTCGAACCTGTCGAGAAATGTTGCCTACATTCATCATGATATTGATTTTGTGATACCCTCAATTCTCCTCGTTG
CAAATTCACGTTCAGGTCTCCCTCTGACGGGGCCCATTATAATCAGCCATAGGATTGTGGAGAACTGTCCTCGGACAGATCCCGGCTACGACCACGCGGCGGATGAGAGA
AAGCAGAGATGGAGCAAAAAGCTAATTTGTTCTTCAAGACAACATGTGTGGACTGAATCATCGCTGTTCAAATCTCGAAGCAAAAGTGGGTTTAGAAAATTTAGAGCTTC
CAATTCAACAGCAGGAAGTTATGGCGGATCTGCTGAGATATCTAAAGGTCAACCGGCGCCATGGCTTTCCACGTGGCCAAGCAAACAGGTTAGAACTTCCAAGTTGCAAT
CCCCCATCTCTCTCCCCTTTCCTCACCACTACGCTTCTCAGATCCTAATTCCTTTCAGTAAGGTCAACTCCATAAAATTTGCATATCCCACACTCTTGTCAAACAAGTTT
GCAATTACTTTTTCTAGCAAAAATACTATTGGTTTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTGGGTTCCAATTCCTCTGCCTCCCTGCTATGTAATGTTCATAAACACAACTTGTAAAGCCAAGGAAAGGAGTTTGAAATCGACATCGTTTTTGTCCTTTCAATT
AATAACCAAACCATCCGAACTCGAAAAGACTGCCACTTCGAACCTGTCGAGAAATGTTGCCTACATTCATCATGATATTGATTTTGTGATACCCTCAATTCTCCTCGTTG
CAAATTCACGTTCAGGTCTCCCTCTGACGGGGCCCATTATAATCAGCCATAGGATTGTGGAGAACTGTCCTCGGACAGATCCCGGCTACGACCACGCGGCGGATGAGAGA
AAGCAGAGATGGAGCAAAAAGCTAATTTGTTCTTCAAGACAACATGTGTGGACTGAATCATCGCTGTTCAAATCTCGAAGCAAAAGTGGGTTTAGAAAATTTAGAGCTTC
CAATTCAACAGCAGGAAGTTATGGCGGATCTGCTGAGATATCTAAAGGTCAACCGGCGCCATGGCTTTCCACGTGGCCAAGCAAACAGGTTAGAACTTCCAAGTTGCAAT
CCCCCATCTCTCTCCCCTTTCCTCACCACTACGCTTCTCAGATCCTAATTCCTTTCAGTAAGGTCAACTCCATAAAATTTGCATATCCCACACTCTTGTCAAACAAGTTT
GCAATTACTTTTTCTAGCAAAAATACTATTGGTTTTTTATAA
Protein sequenceShow/hide protein sequence
MSWVPIPLPPCYVMFINTTCKAKERSLKSTSFLSFQLITKPSELEKTATSNLSRNVAYIHHDIDFVIPSILLVANSRSGLPLTGPIIISHRIVENCPRTDPGYDHAADER
KQRWSKKLICSSRQHVWTESSLFKSRSKSGFRKFRASNSTAGSYGGSAEISKGQPAPWLSTWPSKQVRTSKLQSPISLPFPHHYASQILIPFSKVNSIKFAYPTLLSNKF
AITFSSKNTIGFL