; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G003790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G003790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationchr03:4434027..4436865
RNA-Seq ExpressionLsi03G003790
SyntenyLsi03G003790
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602677.1 hypothetical protein SDJN03_07910, partial [Cucurbita argyrosperma subsp. sororia]1.2e-12082.59Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF++LRNFANPS   SF VNDL N WTSE P  F LP +DFIRESRRGFAKGRKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIA VSVLD KTLSINPYDPN                              TLKNLESAIVSSPLGLA
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAED+CKAKEKEITGG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

KAG7033363.1 frr [Cucurbita argyrosperma subsp. argyrosperma]1.4e-12182.94Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF++LRNFANPS   SF VNDL N WTSE P  F LPP+DFIRESRRGFAKGRKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIA VSVLD KTLSINPYDPN                              TLKNLESAIVSSPLGLA
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAED+CKAKEKEITGG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

XP_022990977.1 uncharacterized protein LOC111487708 [Cucurbita maxima]4.1e-12182.94Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSF YR+F++LRNFANPS   SF VNDL N WTSE P VF LPP+DFIRESRRGFAKGRKSN+SSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIA VSVLD KTLSINPYDPN                              TLKNLESAIVSSPLGLA
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAED+CKAKEKEITGG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

XP_023544000.1 uncharacterized protein LOC111803704 [Cucurbita pepo subsp. pepo]2.2e-12283.28Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF++LRNFANPS  +SF VNDL NSWTSE P  F LPP+DFIRESRRGFAKGRKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIA VSVLD KTLSINPYDPN                              TLKNLESAIVSSPLGLA
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAED+CKAKEKEITGG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

XP_038885564.1 ribosome-recycling factor isoform X1 [Benincasa hispida]2.1e-12586.01Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNFIILRNFAN + K SFIVNDL NS TSETPAVF LPPSDF+RESRRGFAKGRKSN+SSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPN                              TLKNLESAIVSSPLGLA
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHIQA+CKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAED+CKAKEKEITGG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

TrEMBL top hitse value%identityAlignment
A0A1S3B2S9 Ribosome-recycling factor, chloroplastic7.9e-11880.2Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNFIILRNFAN +C  SF +N   NSWTS+T A F LPPSDFIRESRRGFAKGRKSN+SSTS+AEAL DIRPTIK+NASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVETSGVK+PLNQIA VSVLD KTLSINPYDP+                              TLKNLESAI+SSPLG+A
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKK+SSSYPKDDMKRLEKEVDELTKKFIKSAE++CKAKEKEITGG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

A0A5D3DLY3 Ribosome-recycling factor, chloroplastic7.9e-11880.2Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNFIILRNFAN +C  SF +N   NSWTS+T A F LPPSDFIRESRRGFAKGRKSN+SSTS+AEAL DIRPTIK+NASSQMEA+I AL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVETSGVK+PLNQIA VSVLD KTLSINPYDP+                              TLKNLESAI+SSPLG+A
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKK+SSSYPKDDMKRLEKEVDELTKKFIKSAE++CKAKEKEITGG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

A0A6J1BWU9 Ribosome-recycling factor, chloroplastic3.0e-11780.55Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS SYRNF++ RN A PS K SF VND   +WTSETP VF LPP+DFIRESRRGFAK RKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVETSG+KMPLNQIAVVSVLD KTLSINPYDPN                              TLKNLESAIVSSPLGLA
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDELTKKFIKSAED+CKAKEKEI GG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

A0A6J1GLU1 Ribosome-recycling factor, chloroplastic5.8e-12182.59Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSFSYRNF++LRNFANPS   SF V DL N WTSE P  F LPP+DFIRESRRGFAKGRKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIA VSVLD KTLSINPYDPN                              TLKNLESAIVSSPLGLA
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAED+CKAKEKEITGG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

A0A6J1JKE4 Ribosome-recycling factor, chloroplastic2.0e-12182.94Show/hide
Query:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSF YR+F++LRNFANPS   SF VNDL N WTSE P VF LPP+DFIRESRRGFAKGRKSN+SSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA
        SGELSKLRTGRASSGMLDHIIVE SGV+MPLNQIA VSVLD KTLSINPYDPN                              TLKNLESAIVSSPLGLA
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLA

Query:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG
        PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAED+CKAKEKEITGG
Subjt:  PRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG

SwissProt top hitse value%identityAlignment
A4IMC6 Ribosome-recycling factor4.6e-2234.31Show/hide
Query:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNL
        A  +M+ A+ A S EL+ +R GRA++G+L+ + V+  GV  P+NQ+A +SV + + L I PYD +VI                              K +
Subjt:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNL

Query:  ESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAK
        E AI++S LG+ P  DG  +  VIPPLT+E  + + KLV K  E+++ ++R  R+ A D +KK+  +S   +D+++    EV +LT   I   + I K K
Subjt:  ESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAK

Query:  EKEI
        EKE+
Subjt:  EKEI

A5G7W5 Ribosome-recycling factor4.6e-2233.66Show/hide
Query:  NASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKN
        N S+ M+  I AL  E  ++RTGRAS+G+LD I V+  G   P+NQ+A ++V +P+T+++ P+D  +I    PV                          
Subjt:  NASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKN

Query:  LESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDICKA
        +E AI+++ LGL P  DG+ +   IPPLT+E  + + K + K  ED++ ++R  R+ A+D +KK        +DD+KR EKEV ++T   +   +++   
Subjt:  LESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDICKA

Query:  KEKEI
        KEKE+
Subjt:  KEKEI

Q39W85 Ribosome-recycling factor1.2e-2233.5Show/hide
Query:  ANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLK
        A+  + ME ++ AL  E  K+RTGRA++G+LD I VE  G   PL+Q+A +SV +P+T++I P++  +I    PV                         
Subjt:  ANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLK

Query:  NLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDICK
         +E AI+++ LG  P  DG+ +   +PPLT+E  + + K + K  ED++ ++R  R+  +D++KK+       +DD+KR EKEV ++T  F+   E++  
Subjt:  NLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDICK

Query:  AKEKEI
         KEKE+
Subjt:  AKEKEI

Q3A398 Ribosome-recycling factor2.1e-2232.84Show/hide
Query:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNL
        A S M+ A+ +L  +++K+RTGRAS+ +LD ++V+  G   PLNQ+  ++V +P+ ++I P++  +                              L ++
Subjt:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNL

Query:  ESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAK
        E AI  + LGL P  DG  +  VIPP+T+E  + M K+V K  ED++  +R AR+ A D +KK+  +    +DD+KR EKE+ ++T  ++   +D+   K
Subjt:  ESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAK

Query:  EKEI
        EKEI
Subjt:  EKEI

Q9KA66 Ribosome-recycling factor2.7e-2236.1Show/hide
Query:  NASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKN
        +A  +M  A  AL  EL+KLR GRA+  MLD I VE  G + PLNQ+A +SV + + L I P+D + IS                              +
Subjt:  NASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKN

Query:  LESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKK--MSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKA
        +E AI  S LGL P  DG  +   IPPLT+E  + + KLV K  E+++ ++R  R+ A D +KK        +DD++R+ ++V +LT K+I+  +   +A
Subjt:  LESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKK--MSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKA

Query:  KEKEI
        KEKEI
Subjt:  KEKEI

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor2.2e-8059.46Show/hide
Query:  MAMFLKRSFSYRN---FIILRNFANPSCKISFIVNDLPN-SWTSETPAVFPLPPSDFIRESRRGFAKGRKS-NDSSTSMAEALPDIRPTIKANASSQMEA
        MAMF++R+ S RN   F+   +    S   SFI +  PN          F L   DF+R+SRRGFAKG+KS +DS T M +A PDI PT+KA ASSQMEA
Subjt:  MAMFLKRSFSYRN---FIILRNFANPSCKISFIVNDLPN-SWTSETPAVFPLPPSDFIRESRRGFAKGRKS-NDSSTSMAEALPDIRPTIKANASSQMEA

Query:  AIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSS
        AI ALS +L+KLRTGRA+ GMLDHI+VET GVKMPLN +A+VSVLDPKTLS+NPYD                              PDT+K LE AIV+S
Subjt:  AIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSS

Query:  PLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEIT
        PLGL P++DG+RL+A IP LTKEHIQAMCK+VTK  E  +QSIRRARQKA+DT+KK  SS PKD++KRLEKEVDELTKKF+KSAED+CK+KEKEIT
Subjt:  PLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEIT

AT3G63190.1 ribosome recycling factor, chloroplast precursor3.5e-1728.91Show/hide
Query:  RPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTL
        +  I+ +  S+ME  I  L    + +RTGR+++ MLD I VE  G  + L  IA +S  D  +L + PYD +                            
Subjt:  RPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTL

Query:  PDTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSA
          +LK +E AIV+S LG+ P  DG+ +   +PPLT +  + + K+V K  E+ + ++R  R+ A+ +  K+       +D++K L  ++ +L   ++K  
Subjt:  PDTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKM--SSSYPKDDMKRLEKEVDELTKKFIKSA

Query:  EDICKAKEKEI
        E++ K KEKE+
Subjt:  EDICKAKEKEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGTTTCTGAAACGTTCCTTCTCCTACAGAAATTTCATCATTCTCCGAAATTTTGCAAATCCAAGTTGTAAAATTTCGTTCATTGTCAACGATCTCCCCAACTC
ATGGACATCCGAGACGCCTGCCGTATTTCCTCTTCCTCCTTCAGATTTTATCCGAGAAAGTCGTAGGGGTTTTGCTAAAGGCCGAAAATCAAATGATTCTTCTACAAGTA
TGGCCGAGGCATTGCCTGATATTAGACCCACTATTAAAGCAAACGCTAGCTCCCAGATGGAGGCTGCAATAGCTGCATTATCGGGAGAATTAAGCAAACTTCGAACGGGC
AGGGCATCATCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGATGCCATTGAATCAGATCGCGGTTGTATCGGTCTTGGATCCAAAAACATTGTCAAT
AAATCCCTATGATCCTAATGTAATCAGCTTACAAAATCCTGTTCTTAAAGTATTGTCATTAGAGTATTGTCATTATCGTAACAAGGTTCTTGTTTCTACTCTACCTGACA
CACTAAAGAATTTAGAGAGTGCTATAGTCTCATCTCCTTTAGGTCTAGCACCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAACATATC
CAGGCCATGTGTAAGCTGGTCACCAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCCATGGATACAGTTAAAAAAATGAGCTCAAGCTACCC
GAAGGATGACATGAAAAGACTGGAAAAGGAAGTAGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGATATCTGCAAGGCAAAGGAGAAGGAGATCACTGGAGGTT
AA
mRNA sequenceShow/hide mRNA sequence
CCTGTTGTCACCGTTGGGGTTTACGAAAAACCCTAATCAGAAATCATAGCAAGCATCCAAATGAAGAATTAAGTTCGGGGGTTCGATCGGTTCGAGCATGAACGTCTAGT
TCAATGGCTATGTTTCTGAAACGTTCCTTCTCCTACAGAAATTTCATCATTCTCCGAAATTTTGCAAATCCAAGTTGTAAAATTTCGTTCATTGTCAACGATCTCCCCAA
CTCATGGACATCCGAGACGCCTGCCGTATTTCCTCTTCCTCCTTCAGATTTTATCCGAGAAAGTCGTAGGGGTTTTGCTAAAGGCCGAAAATCAAATGATTCTTCTACAA
GTATGGCCGAGGCATTGCCTGATATTAGACCCACTATTAAAGCAAACGCTAGCTCCCAGATGGAGGCTGCAATAGCTGCATTATCGGGAGAATTAAGCAAACTTCGAACG
GGCAGGGCATCATCTGGAATGCTTGACCACATTATAGTAGAAACTTCAGGTGTGAAGATGCCATTGAATCAGATCGCGGTTGTATCGGTCTTGGATCCAAAAACATTGTC
AATAAATCCCTATGATCCTAATGTAATCAGCTTACAAAATCCTGTTCTTAAAGTATTGTCATTAGAGTATTGTCATTATCGTAACAAGGTTCTTGTTTCTACTCTACCTG
ACACACTAAAGAATTTAGAGAGTGCTATAGTCTCATCTCCTTTAGGTCTAGCACCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAACAT
ATCCAGGCCATGTGTAAGCTGGTCACCAAGTGTTGCGAAGATTCCAGACAAAGCATACGACGAGCTCGTCAAAAGGCCATGGATACAGTTAAAAAAATGAGCTCAAGCTA
CCCGAAGGATGACATGAAAAGACTGGAAAAGGAAGTAGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGATATCTGCAAGGCAAAGGAGAAGGAGATCACTGGAG
GTTAAATGTTTGAAAGAAAAAAAAAATTAGTAGTTCCCAGTTTTGACAGATGAATCACTCAAATAATTATTGTATTTTTTTTTTCAATTCAGCCGTCCCATTATAGAGTT
TTTCATAGTCATATCGAGGGATGTAACAGTGAGATGAGTGTATCTGTCATACTTCGAGACATTGAATCAATCCAATTGGATTTTACAATAGATGGATGTTGAATGGTCGA
TTCAATATTATTTACTATTTCAATTATTTTCA
Protein sequenceShow/hide protein sequence
MAMFLKRSFSYRNFIILRNFANPSCKISFIVNDLPNSWTSETPAVFPLPPSDFIRESRRGFAKGRKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTG
RASSGMLDHIIVETSGVKMPLNQIAVVSVLDPKTLSINPYDPNVISLQNPVLKVLSLEYCHYRNKVLVSTLPDTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHI
QAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDELTKKFIKSAEDICKAKEKEITGG