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Lsi03G004230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G004230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:4791532..4793454
RNA-Seq ExpressionLsi03G004230
SyntenyLsi03G004230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0D9UYE8 Uncharacterized protein5.9e-1043.59Show/hide
Query:  KIGYSSLSVSPITDRKSSFVSFAMTSARLVLLVE-------WEYIFAWKNGVASTSWTDNLNFDAVSTLAIL--------LGLTAIASSKLVDSRRSWEI
        KIGY S +VSP +D   S  S   ++A L LL+E       W Y+ AWKNG A  S T+N   +AVSTL IL        + +T +ASS+LV SRRS + 
Subjt:  KIGYSSLSVSPITDRKSSFVSFAMTSARLVLLVE-------WEYIFAWKNGVASTSWTDNLNFDAVSTLAIL--------LGLTAIASSKLVDSRRSWEI

Query:  KFRPIAPGSISSFTGRT
        KFR + P + S   G T
Subjt:  KFRPIAPGSISSFTGRT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATAGGATATTCCTCGTTGTCTGTATCTCCAATAACCGACAGGAAATCATCTTTTGTTTCTTTTGCCATGACATCAGCTCGTCTTGTTCTGCTTGTGGAGTGGGA
ATACATATTTGCATGGAAAAATGGTGTAGCCTCAACCTCGTGGACTGACAATCTAAACTTTGATGCTGTTTCTACACTCGCAATTCTTCTTGGCCTTACAGCTATTGCAT
CTTCGAAGCTTGTAGATTCAAGGAGGTCCTGGGAGATAAAGTTTCGTCCGATTGCCCCAGGTTCAATCTCATCATTCACTGGACGCACTGTATTCATGCCAGACAGACCA
AAGCTGGCATCTTCATTATGTGCTGCAAGGGCTAATGAATCACTAACAACAAGAATATCAGAACAATCATCTGTACAATCAACAATGGAAGCCTCGTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATAGGATATTCCTCGTTGTCTGTATCTCCAATAACCGACAGGAAATCATCTTTTGTTTCTTTTGCCATGACATCAGCTCGTCTTGTTCTGCTTGTGGAGTGGGA
ATACATATTTGCATGGAAAAATGGTGTAGCCTCAACCTCGTGGACTGACAATCTAAACTTTGATGCTGTTTCTACACTCGCAATTCTTCTTGGCCTTACAGCTATTGCAT
CTTCGAAGCTTGTAGATTCAAGGAGGTCCTGGGAGATAAAGTTTCGTCCGATTGCCCCAGGTTCAATCTCATCATTCACTGGACGCACTGTATTCATGCCAGACAGACCA
AAGCTGGCATCTTCATTATGTGCTGCAAGGGCTAATGAATCACTAACAACAAGAATATCAGAACAATCATCTGTACAATCAACAATGGAAGCCTCGTCCTGA
Protein sequenceShow/hide protein sequence
MKIGYSSLSVSPITDRKSSFVSFAMTSARLVLLVEWEYIFAWKNGVASTSWTDNLNFDAVSTLAILLGLTAIASSKLVDSRRSWEIKFRPIAPGSISSFTGRTVFMPDRP
KLASSLCAARANESLTTRISEQSSVQSTMEASS