; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G004370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G004370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:4923142..4925765
RNA-Seq ExpressionLsi03G004370
SyntenyLsi03G004370
Gene Ontology termsNA
InterPro domainsIPR037690 - Protein FAM204A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06677.1 uncharacterized protein E5676_scaffold453G001700 [Cucumis melo var. makuwa]3.2e-5285.82Show/hide
Query:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD
        MEDGEE ESRGLANAS+SSLQPNFKPKRVT EQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHL+TS+EVNEAEHSRLSNS+VDFG+KS  VQ D
Subjt:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD

Query:  KKKTKLPSKKLHKLHWGPELCGNSHSVDDEDWTK
        K KT L SKKLHKLHWGPELCGN   VD E+W K
Subjt:  KKKTKLPSKKLHKLHWGPELCGNSHSVDDEDWTK

XP_004138636.1 uncharacterized protein LOC101215509 isoform X3 [Cucumis sativus]1.4e-4284.62Show/hide
Query:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD
        MEDGEE ESRGL NAS+SSLQPN KP RVT EQ SKFQELQRRRLQIKSRSKIRKNTKDATGKSQ+ HL+TS+EVNEAEHSRLSNS+VDFG+KS  VQ D
Subjt:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD

Query:  KKKTKLPSKKLHKLHWG
        K KT LPSKKLHKLHWG
Subjt:  KKKTKLPSKKLHKLHWG

XP_008441256.1 PREDICTED: uncharacterized protein LOC103485441 [Cucumis melo]8.5e-4588.89Show/hide
Query:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD
        MEDGEE ESRGLANAS+SSLQPNFKPKRVT EQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHL+TS+EVNEAEHSRLSNS+VDFG+KS  VQ D
Subjt:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD

Query:  KKKTKLPSKKLHKLHWG
        K KT L SKKLHKLHWG
Subjt:  KKKTKLPSKKLHKLHWG

XP_038884370.1 uncharacterized protein LOC120075231 isoform X1 [Benincasa hispida]2.5e-4485.95Show/hide
Query:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTK-DATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQ
        MEDGEE E RGLA+ASA SLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSK RKNTK DATGKSQIKHL+T+DEVNEA++SRLSNSEVDFG+KS HVQQ
Subjt:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTK-DATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQ

Query:  DKKKTKLPSKKLHKLHWGPEL
        DK KT  PSKKLHKLHWG E+
Subjt:  DKKKTKLPSKKLHKLHWGPEL

XP_038884371.1 uncharacterized protein LOC120075231 isoform X2 [Benincasa hispida]7.2e-4487.29Show/hide
Query:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTK-DATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQ
        MEDGEE E RGLA+ASA SLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSK RKNTK DATGKSQIKHL+T+DEVNEA++SRLSNSEVDFG+KS HVQQ
Subjt:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTK-DATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQ

Query:  DKKKTKLPSKKLHKLHWG
        DK KT  PSKKLHKLHWG
Subjt:  DKKKTKLPSKKLHKLHWG

TrEMBL top hitse value%identityAlignment
A0A0A0LMI7 Uncharacterized protein6.5e-4384.62Show/hide
Query:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD
        MEDGEE ESRGL NAS+SSLQPN KP RVT EQ SKFQELQRRRLQIKSRSKIRKNTKDATGKSQ+ HL+TS+EVNEAEHSRLSNS+VDFG+KS  VQ D
Subjt:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD

Query:  KKKTKLPSKKLHKLHWG
        K KT LPSKKLHKLHWG
Subjt:  KKKTKLPSKKLHKLHWG

A0A1S3B3S6 uncharacterized protein LOC1034854414.1e-4588.89Show/hide
Query:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD
        MEDGEE ESRGLANAS+SSLQPNFKPKRVT EQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHL+TS+EVNEAEHSRLSNS+VDFG+KS  VQ D
Subjt:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD

Query:  KKKTKLPSKKLHKLHWG
        K KT L SKKLHKLHWG
Subjt:  KKKTKLPSKKLHKLHWG

A0A5D3C4A2 Uncharacterized protein1.6e-5285.82Show/hide
Query:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD
        MEDGEE ESRGLANAS+SSLQPNFKPKRVT EQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHL+TS+EVNEAEHSRLSNS+VDFG+KS  VQ D
Subjt:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD

Query:  KKKTKLPSKKLHKLHWGPELCGNSHSVDDEDWTK
        K KT L SKKLHKLHWGPELCGN   VD E+W K
Subjt:  KKKTKLPSKKLHKLHWGPELCGNSHSVDDEDWTK

A0A6J1BWD6 uncharacterized protein LOC111006121 isoform X12.5e-3476.07Show/hide
Query:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD
        M DG EGE R    AS  SLQPNFKPK VT+EQLSKFQEL RRRLQIKSRSKIRKNTKD  GKSQI+HL+ SD  NEAE S+ SNS+VD G+KS HVQQD
Subjt:  MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQD

Query:  KKKTKLPSKKLHKLHWG
        K KT LPSKKLHKLHWG
Subjt:  KKKTKLPSKKLHKLHWG

A0A6J1HF11 uncharacterized protein LOC111462444 isoform X11.1e-3477.39Show/hide
Query:  EEGESRGLANASASSLQPNF--KPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQDKK
        EEGE R    AS  SLQPNF  KPK VT+EQLSKFQEL RRRLQIKSRSKIRKNTK  TGKSQIK L+T DEVNEAEHSRLSNS+VDFG+KS HVQ+D  
Subjt:  EEGESRGLANASASSLQPNF--KPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQDKK

Query:  KTKLPSKKLHKLHWG
         T LPSK+LHKLHWG
Subjt:  KTKLPSKKLHKLHWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16160.1 unknown protein1.3e-0634.78Show/hide
Query:  DGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQDKK
        + EE     L  AS  SLQPNF    +T +Q+SK QEL +RR+QIK+ +KI K    A+  SQ      S  + + E S+           +   Q   K
Subjt:  DGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQDKK

Query:  KTKLPSKKLHKLHWG
              KK  KL WG
Subjt:  KTKLPSKKLHKLHWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATGGTGAAGAAGGCGAGTCGAGAGGCTTGGCAAATGCGTCAGCCTCATCTCTACAACCAAATTTCAAACCTAAAAGAGTCACTAACGAGCAGCTCTCGAAATT
TCAGGAGCTTCAAAGGAGGCGACTTCAGATTAAATCAAGGTCAAAGATAAGAAAGAATACAAAAGATGCGACTGGAAAATCTCAAATCAAACATCTCAGTACCAGTGATG
AAGTTAATGAAGCTGAACACTCGAGACTTTCCAATTCTGAGGTTGATTTTGGAAAAAAGAGCTACCATGTTCAGCAAGACAAGAAAAAAACTAAACTTCCATCCAAAAAG
CTACACAAGTTACATTGGGGACCTGAATTATGTGGAAACTCACACAGTGTGGACGATGAAGACTGGACAAAAAGATAG
mRNA sequenceShow/hide mRNA sequence
AAATCACGAGAGGGGAAGAACGCGGGCAGTTCTCGCTTCTCGGTCGTCGGAAGAGAGAACAAAATAGCGATGAAATTAGAAACCCAAAGAAGCTGAGTTAATTAAACAGT
GGCGAAAATGGAGGATGGTGAAGAAGGCGAGTCGAGAGGCTTGGCAAATGCGTCAGCCTCATCTCTACAACCAAATTTCAAACCTAAAAGAGTCACTAACGAGCAGCTCT
CGAAATTTCAGGAGCTTCAAAGGAGGCGACTTCAGATTAAATCAAGGTCAAAGATAAGAAAGAATACAAAAGATGCGACTGGAAAATCTCAAATCAAACATCTCAGTACC
AGTGATGAAGTTAATGAAGCTGAACACTCGAGACTTTCCAATTCTGAGGTTGATTTTGGAAAAAAGAGCTACCATGTTCAGCAAGACAAGAAAAAAACTAAACTTCCATC
CAAAAAGCTACACAAGTTACATTGGGGACCTGAATTATGTGGAAACTCACACAGTGTGGACGATGAAGACTGGACAAAAAGATAGAGAAACTGTAACAAATTCTTGTGAA
TTGCCTCTAGGTATGATGTCTTCTGCGTTGGCACATAAAAGTAATACATTTCAAGATGATTTAACATTGGTTAGAGAACCATTTTTTACAAGGTTGTATTATAAGTTTAT
ACTTCAACTTGAATGATTATGTGCCTAAGTAATGTTTTTTGAAATATGATGTGTGCTTTTATGTTGCTTTTGCTGTTAAA
Protein sequenceShow/hide protein sequence
MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQDKKKTKLPSKK
LHKLHWGPELCGNSHSVDDEDWTKR