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Lsi03G004510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G004510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:5111724..5112146
RNA-Seq ExpressionLsi03G004510
SyntenyLsi03G004510
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037001.1 uncharacterized protein E6C27_scaffold86G00860 [Cucumis melo var. makuwa]4.5e-4185Show/hide
Query:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN
        M  IDASNEKRK KSR+CQTT+  DGEENENENNDSDNELG+ Q+V ENGEEEGKNAPTKDGANG ED SNDNGDGGSENSGEGG DDEE+NDDGGSD+N
Subjt:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN

Query:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        NEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

XP_008441238.1 PREDICTED: uncharacterized protein DDB_G0290685-like [Cucumis melo]4.5e-4185Show/hide
Query:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN
        M  IDASNEKRK KSR+CQTT+  DGEENENENNDSDNELG+ Q+V ENGEEEGKNAPTKDGANG ED SNDNGDGGSENSGEGG DDEE+NDDGGSD+N
Subjt:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN

Query:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        NEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

XP_011649914.1 uncharacterized protein DDB_G0290685 isoform X2 [Cucumis sativus]5.0e-4084.51Show/hide
Query:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNA-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSD
        M  IDAS+EKRK KSR+CQTT+PI+GEENENENNDSDNELGEDQ+V ENG EEGKNA PTKDGAN GGED SNDNGDGGSENSGEGGD++EE+NDDGGSD
Subjt:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNA-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSD

Query:  KNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        +NNEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  KNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

XP_038885474.1 uncharacterized protein DDB_G0290685-like isoform X1 [Benincasa hispida]5.9e-4184.83Show/hide
Query:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENG-EEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDK
        M  IDAS EKRK KSR+CQTTKPIDGEENENENNDSDNELGEDQ+VLENG EEEGKNAPTKDGANGG+ ASNDNGDGG ENSGEGG DDEEDNDDGGSD+
Subjt:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENG-EEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDK

Query:  ----NNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
            NNEDNNED+ED+DEEDAEED+F  E DDDEETLPPPKKRKK
Subjt:  ----NNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

XP_038885476.1 uncharacterized protein DDB_G0290685-like isoform X2 [Benincasa hispida]5.9e-4184.83Show/hide
Query:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENG-EEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDK
        M  IDAS EKRK KSR+CQTTKPIDGEENENENNDSDNELGEDQ+VLENG EEEGKNAPTKDGANGG+ ASNDNGDGG ENSGEGG DDEEDNDDGGSD+
Subjt:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENG-EEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDK

Query:  ----NNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
            NNEDNNED+ED+DEEDAEED+F  E DDDEETLPPPKKRKK
Subjt:  ----NNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

TrEMBL top hitse value%identityAlignment
A0A0A0LSW9 Uncharacterized protein2.4e-4084.51Show/hide
Query:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNA-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSD
        M  IDAS+EKRK KSR+CQTT+PI+GEENENENNDSDNELGEDQ+V ENG EEGKNA PTKDGAN GGED SNDNGDGGSENSGEGGD++EE+NDDGGSD
Subjt:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNA-PTKDGAN-GGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSD

Query:  KNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        +NNEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  KNNEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

A0A1S3B301 uncharacterized protein DDB_G0290685-like2.2e-4185Show/hide
Query:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN
        M  IDASNEKRK KSR+CQTT+  DGEENENENNDSDNELG+ Q+V ENGEEEGKNAPTKDGANG ED SNDNGDGGSENSGEGG DDEE+NDDGGSD+N
Subjt:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN

Query:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        NEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

A0A5A7T5X7 Uncharacterized protein2.2e-4185Show/hide
Query:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN
        M  IDASNEKRK KSR+CQTT+  DGEENENENNDSDNELG+ Q+V ENGEEEGKNAPTKDGANG ED SNDNGDGGSENSGEGG DDEE+NDDGGSD+N
Subjt:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN

Query:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        NEDNNED++DVDEEDAEEDNFE E +DDEETLPPPKKRKK
Subjt:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

A0A6J1DGC0 uncharacterized protein DDB_G0290685-like2.3e-2774.1Show/hide
Query:  SNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDA--SNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDN
        +NEKRK     CQ  KP+DGE NENENN SDN+LGED++VLENGEEEGKNAP K+GANGG DA  SNDN DGGS+NSG+GGDD   DNDDGGSD N+EDN
Subjt:  SNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDA--SNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDN

Query:  NEDEEDVDEEDA---EEDNFEEEDDDDEETLPPPKKRKK
        NED+EDVDE+DA   EEDNFE E  +DEETLPPPKKRKK
Subjt:  NEDEEDVDEEDA---EEDNFEEEDDDDEETLPPPKKRKK

A0A6J1FG81 uncharacterized protein DDB_G0290685-like isoform X13.4e-2671.43Show/hide
Query:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN
        M AI   N+KRK  S + QT     G ENEN+NNDSDNE G++Q+ LENG E+GKNAPTKDGANGGE+ASNDNGDGGSENSG+GG  DE+D DDGGS++N
Subjt:  MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKN

Query:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK
        +EDN EDEED DEED EED FE E  DDEETLPPPKKRKK
Subjt:  NEDNNEDEEDVDEEDAEEDNFEEEDDDDEETLPPPKKRKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCCATTGATGCATCCAACGAAAAAAGGAAACCCAAGTCTAGGAGATGTCAAACGACAAAGCCGATTGATGGAGAAGAAAATGAAAATGAGAATAACGATAGTGA
TAACGAACTTGGAGAAGATCAAGAAGTGCTTGAAAATGGAGAGGAAGAAGGTAAAAATGCTCCCACTAAAGATGGTGCTAATGGAGGAGAAGATGCTAGCAATGATAACG
GCGATGGTGGAAGTGAGAATAGTGGTGAGGGTGGTGATGACGACGAAGAAGATAATGATGATGGTGGAAGCGATAAAAACAATGAAGATAATAATGAAGATGAGGAAGAC
GTGGATGAAGAAGATGCCGAGGAAGACAACTTTGAAGAAGAAGACGATGATGATGAAGAAACCCTTCCACCACCAAAGAAGAGAAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGCCATTGATGCATCCAACGAAAAAAGGAAACCCAAGTCTAGGAGATGTCAAACGACAAAGCCGATTGATGGAGAAGAAAATGAAAATGAGAATAACGATAGTGA
TAACGAACTTGGAGAAGATCAAGAAGTGCTTGAAAATGGAGAGGAAGAAGGTAAAAATGCTCCCACTAAAGATGGTGCTAATGGAGGAGAAGATGCTAGCAATGATAACG
GCGATGGTGGAAGTGAGAATAGTGGTGAGGGTGGTGATGACGACGAAGAAGATAATGATGATGGTGGAAGCGATAAAAACAATGAAGATAATAATGAAGATGAGGAAGAC
GTGGATGAAGAAGATGCCGAGGAAGACAACTTTGAAGAAGAAGACGATGATGATGAAGAAACCCTTCCACCACCAAAGAAGAGAAAGAAGTAA
Protein sequenceShow/hide protein sequence
MYAIDASNEKRKPKSRRCQTTKPIDGEENENENNDSDNELGEDQEVLENGEEEGKNAPTKDGANGGEDASNDNGDGGSENSGEGGDDDEEDNDDGGSDKNNEDNNEDEED
VDEEDAEEDNFEEEDDDDEETLPPPKKRKK