CuGenDBv2

Gene ID	Lsi03G004810
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein PARTING DANCERS
Genome location	chr03:5469807..5474970
RNA-Seq Expression	Lsi03G004810
Synteny	Lsi03G004810
Gene Ontology terms	GO:0000712 - resolution of meiotic recombination intermediates (biological process) GO:0007140 - male meiotic nuclear division (biological process) GO:0009555 - pollen development (biological process) GO:0010845 - positive regulation of reciprocal meiotic recombination (biological process) GO:0048236 - plant-type sporogenesis (biological process) GO:0005634 - nucleus (cellular component) GO:0005694 - chromosome (cellular component)
InterPro domains	IPR010994 - RuvA domain 2-like IPR039172 - Protein parting dancers

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004138826.1 protein PARTING DANCERS isoform X3 [Cucumis sativus]

1.2e-121

90.28

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Query:  MENLSHRDA-----NQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ
        M N S RDA     NQ+KAKN GGGVCLMSN WRDEQHPSFINF+SNFLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSW+CSNTSSIFSRVQKLKKQ
Subjt:  MENLSHRDA-----NQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ

Query:  FANFYVVVALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FAN YVVV LPTKEQN SFVQSYFRNG+EIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQD++SKL+TERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Subjt:  FANFYVVVALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        QAIGSIEAIAKASKEYILENTDLSVEKAERIR+FFRDPK YLSPKIN
Subjt:  QAIGSIEAIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

XP_008441175.1 PREDICTED: uncharacterized protein LOC103485388 isoform X3 [Cucumis melo]

9.0e-122

93.19

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Query:  DANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVALPT
        D N +KAKNHGGGVCLMSN WRDEQHPSFINF+SNFLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFAN YVVV LPT
Subjt:  DANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVALPT

Query:  KEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKA
        KEQN SFVQSYFRNG+EIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQD++SKL+TERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKA
Subjt:  KEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKA

Query:  SKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        SKEYILENTDLSVEKAERIR+FFRDPKFYLS KIN
Subjt:  SKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

XP_022938483.1 protein PARTING DANCERS [Cucurbita moschata]

1.2e-118

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Query:  NLSHRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVV
        +++  D NQ+KAKN GGGVCLMSN WRDEQHPS INFMSNFL  NSFRLNFVPI PDLIFNCGGLSVAFAF+TSWDCSNTSSIF RVQKL KQFANFYVV
Subjt:  NLSHRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVV

Query:  VALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE
        VALPTKEQN SFVQSYFRNG+EIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQDVMSKL+TERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE
Subjt:  VALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE

Query:  AIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        AIAKASKE ILENTDLSV+KAERIR+FFRDPKFYLSPKIN
Subjt:  AIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

XP_022992780.1 protein PARTING DANCERS [Cucurbita maxima]

2.9e-120

90.83

Show/hide

Query:  NLSHRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVV
        +++  D NQ+KAKN GGGVCLMSN WRDEQHPS INFMSNFL TNSFRLNFVPI PDLIFNCGGLSVAFAF+TSWDCSNTSSIF RVQKL KQFANFYVV
Subjt:  NLSHRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVV

Query:  VALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE
        VALPTKEQN SFVQSYFRNG+EIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQDVMSKL+TERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE
Subjt:  VALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE

Query:  AIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        AIAKASKEYILENTDLSV+KAERIR+FFRDPKFYLSPKIN
Subjt:  AIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

XP_038884563.1 protein PARTING DANCERS isoform X1 [Benincasa hispida]

1.6e-123

91.9

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Query:  MENLSHRDANQL-----KAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ
        MEN S RDANQ+     KAKN GGGVCLMSN WRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTS I+SRVQKLKKQ
Subjt:  MENLSHRDANQL-----KAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ

Query:  FANFYVVVALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFYVVV LPTKEQN SFVQSYFRNG+EIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDV+ KL+TERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Subjt:  FANFYVVVALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        QAIGSIEAIAKASKEYILENTDLSVEKAERIR+FFRDPK YLSPKIN
Subjt:  QAIGSIEAIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMP7 Uncharacterized protein

5.7e-122

90.28

Show/hide

Query:  MENLSHRDA-----NQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ
        M N S RDA     NQ+KAKN GGGVCLMSN WRDEQHPSFINF+SNFLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSW+CSNTSSIFSRVQKLKKQ
Subjt:  MENLSHRDA-----NQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ

Query:  FANFYVVVALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FAN YVVV LPTKEQN SFVQSYFRNG+EIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQD++SKL+TERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
Subjt:  FANFYVVVALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        QAIGSIEAIAKASKEYILENTDLSVEKAERIR+FFRDPK YLSPKIN
Subjt:  QAIGSIEAIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

A0A1S3B2D1 uncharacterized protein LOC103485388 isoform X3

4.4e-122

93.19

Show/hide

Query:  DANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVALPT
        D N +KAKNHGGGVCLMSN WRDEQHPSFINF+SNFLC+NSFRLNFVPI PDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFAN YVVV LPT
Subjt:  DANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVALPT

Query:  KEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKA
        KEQN SFVQSYFRNG+EIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQD++SKL+TERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKA
Subjt:  KEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKA

Query:  SKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        SKEYILENTDLSVEKAERIR+FFRDPKFYLS KIN
Subjt:  SKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

A0A6J1DG15 protein PARTING DANCERS isoform X1

7.7e-119

88.26

Show/hide

Query:  MENLSHRDA-----NQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ
        M NLS  DA     NQ+KAKN  GGVCLMSN WRDEQHPSFINFMSNFL TNSFRLNFVPI PDLIFNCGGLSVAFAF+TSWDCSNTSSIFSRVQKLKKQ
Subjt:  MENLSHRDA-----NQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQ

Query:  FANFYVVVALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN
        FANFY VVALPTKEQN SFV+SYFRNG+EIGKPPF+ VQDIEMGFEKIVKIAHSRGACKQQDVMSKL+TERKRSVQ MDAFRRV++SVPG+DDHDANSLN
Subjt:  FANFYVVVALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLN

Query:  QAIGSIEAIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        QAIGSIEAIAKASKEYILENTDLS +KAERIR FFRDPKFYLSPKIN
Subjt:  QAIGSIEAIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

A0A6J1FJ08 protein PARTING DANCERS

5.9e-119

Show/hide

Query:  NLSHRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVV
        +++  D NQ+KAKN GGGVCLMSN WRDEQHPS INFMSNFL  NSFRLNFVPI PDLIFNCGGLSVAFAF+TSWDCSNTSSIF RVQKL KQFANFYVV
Subjt:  NLSHRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVV

Query:  VALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE
        VALPTKEQN SFVQSYFRNG+EIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQDVMSKL+TERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE
Subjt:  VALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE

Query:  AIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        AIAKASKE ILENTDLSV+KAERIR+FFRDPKFYLSPKIN
Subjt:  AIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

A0A6J1JWN6 protein PARTING DANCERS

1.4e-120

90.83

Show/hide

Query:  NLSHRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVV
        +++  D NQ+KAKN GGGVCLMSN WRDEQHPS INFMSNFL TNSFRLNFVPI PDLIFNCGGLSVAFAF+TSWDCSNTSSIF RVQKL KQFANFYVV
Subjt:  NLSHRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVV

Query:  VALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE
        VALPTKEQN SFVQSYFRNG+EIGKPPFV VQD+EMGFEKIVKIAHSRGACKQQDVMSKL+TERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE
Subjt:  VALPTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIE

Query:  AIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        AIAKASKEYILENTDLSV+KAERIR+FFRDPKFYLSPKIN
Subjt:  AIAKASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

SwissProt top hits

e value

%identity

Alignment

F4IDW9 Protein PARTING DANCERS

2.8e-81

64.14

Show/hide

Query:  HRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVAL
        H+ ++ L    +  GVC+MSN W+ EQ PS INF+S FL  NSFRLNFV I PDLIFNCGG+S+AF F+T WD SN +SIFSRV++LK QFA  YVV  L
Subjt:  HRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVAL

Query:  PTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIA
         TKEQ+ SF++SYF+  +E GKP FV V D EMGFEKIVKIAHSRG CKQQ V SKLK ERKR+VQ  + F R ++S+P ++ HDAN+L QAIGSIEAIA
Subjt:  PTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIA

Query:  KASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        KASKE IL NTDLS +KA+ +  FF+DP+FYLSPK N
Subjt:  KASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

Q6L5B5 Protein PARTING DANCERS homolog

3.6e-81

64.89

Show/hide

Query:  GGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVALPTKEQNGSFVQS
        G GVC MS +WRD+Q PS INF++ FL  NS+RLNF+ I PD IFN G LSVAF F T+WDC N  ++FSRV  LK+Q  + YVVVA+PTKEQN SF +S
Subjt:  GGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVALPTKEQNGSFVQS

Query:  YFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTD
        Y + G+++G P FV V D EMGFEKIVKIAH+ G CKQQD++S+LK ER+++VQ  D+F RV++S+PG+D+HDAN+L QAIGSIEAIAKASK++ILENTD
Subjt:  YFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTD

Query:  LSVEKAERIRTFFRDPKFYLSPKIN
        LS +KAE I  FFRDP++YLSPKIN
Subjt:  LSVEKAERIRTFFRDPKFYLSPKIN

Arabidopsis top hits

e value

%identity

Alignment

AT1G12790.1 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

2.0e-82

64.14

Show/hide

Query:  HRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVAL
        H+ ++ L    +  GVC+MSN W+ EQ PS INF+S FL  NSFRLNFV I PDLIFNCGG+S+AF F+T WD SN +SIFSRV++LK QFA  YVV  L
Subjt:  HRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVAL

Query:  PTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIA
         TKEQ+ SF++SYF+  +E GKP FV V D EMGFEKIVKIAHSRG CKQQ V SKLK ERKR+VQ  + F R ++S+P ++ HDAN+L QAIGSIEAIA
Subjt:  PTKEQNGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIA

Query:  KASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN
        KASKE IL NTDLS +KA+ +  FF+DP+FYLSPK N
Subjt:  KASKEYILENTDLSVEKAERIRTFFRDPKFYLSPKIN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGAATTTGTCACACAGAGATGCTAATCAATTGAAAGCAAAAAATCACGGTGGTGGAGTCTGTTTGATGAGCAATACATGGAGAGATGAGCAGCATCCATCCTTCAT
CAATTTCATGTCAAATTTCCTTTGCACAAACTCATTTCGCCTCAATTTTGTTCCAATTGTCCCAGACTTGATATTCAATTGCGGGGGTTTATCAGTGGCTTTTGCTTTCC
TGACAAGTTGGGATTGCAGCAATACGTCATCAATCTTTAGCAGAGTTCAAAAGTTGAAGAAGCAGTTTGCAAATTTCTATGTTGTTGTTGCCCTTCCAACCAAGGAGCAG
AATGGTTCATTTGTTCAATCTTACTTCAGAAATGGGTTGGAGATTGGTAAGCCACCATTTGTAGCAGTTCAGGATATTGAGATGGGCTTTGAGAAGATTGTGAAGATAGC
ACATTCTCGTGGAGCATGCAAGCAGCAAGATGTCATGTCAAAACTGAAAACTGAGAGGAAGAGATCGGTGCAAGTCATGGATGCTTTTCGTAGAGTCATGTCTTCTGTAC
CAGGCCTTGATGATCACGATGCAAATTCGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCATCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTG
GAGAAGGCGGAGAGAATTAGGACCTTTTTCAGGGATCCAAAATTCTACCTCAGTCCCAAAATAAACTGA

mRNA sequence

Show/hide mRNA sequence

CGCCACTTCTCCTCTCGGCTCCCACTGCGTCTCTTCCTCTCTTTCAAATCTCTCTCGTTTCTGTACAACTTTACTGTTACTACTGAGAATTGGCTATGGAGAATTTGTCA
CACAGAGATGCTAATCAATTGAAAGCAAAAAATCACGGTGGTGGAGTCTGTTTGATGAGCAATACATGGAGAGATGAGCAGCATCCATCCTTCATCAATTTCATGTCAAA
TTTCCTTTGCACAAACTCATTTCGCCTCAATTTTGTTCCAATTGTCCCAGACTTGATATTCAATTGCGGGGGTTTATCAGTGGCTTTTGCTTTCCTGACAAGTTGGGATT
GCAGCAATACGTCATCAATCTTTAGCAGAGTTCAAAAGTTGAAGAAGCAGTTTGCAAATTTCTATGTTGTTGTTGCCCTTCCAACCAAGGAGCAGAATGGTTCATTTGTT
CAATCTTACTTCAGAAATGGGTTGGAGATTGGTAAGCCACCATTTGTAGCAGTTCAGGATATTGAGATGGGCTTTGAGAAGATTGTGAAGATAGCACATTCTCGTGGAGC
ATGCAAGCAGCAAGATGTCATGTCAAAACTGAAAACTGAGAGGAAGAGATCGGTGCAAGTCATGGATGCTTTTCGTAGAGTCATGTCTTCTGTACCAGGCCTTGATGATC
ACGATGCAAATTCGCTAAATCAAGCTATTGGTTCAATTGAGGCAATCGCCAAAGCATCGAAGGAGTACATTTTGGAGAACACAGATCTGTCAGTGGAGAAGGCGGAGAGA
ATTAGGACCTTTTTCAGGGATCCAAAATTCTACCTCAGTCCCAAAATAAACTGATATTTGTAATCTCTTTGGTCTCAGATGAATTCCATGGAAGAAGTTCGAGACACACA
CACACCCAAAGGAAAAGGTAAGAAAAATAGAAAAGATCAAATAGAAGTAAAAGAAAACTCTATAAGCAAGTGGAAATTGAAGAGAATAAGCAGTTCCCAAGTGTTAAAGT
GAGGGAGAGGATATGAACCGAGAGATGGAGAAAGAATCTTACCCATTGCTTTGTTGCTAATATAATATCCGCTGCTTAGGCTGTAGGGATGCTTAGTCAAGTTTGACTCG
GTTTAAACTGTTGACTCATTCAGATTTTGAATACATATAAATGCTTTGCTAGCTATTGCCTGTGCGGCCTGTCGTTTGTGTAGATTGAGTCTCATTCCATTTCCAGTAGG
CAAAGCCAATCCACATAATAAATTGCCGTAACGGATTGAATTTATCTTATAAACATGGATGCTGGATGGAGTCAACCCATGTGATAAATTTTGGGGTTAGGTTCTATGAG
CAAATATTTATTATTATTGTAAATATCAATTTATACTTTTAAACTTCGGAGGTTATATCAATTTGAACCCTGAACTAATA

Protein sequence

Show/hide protein sequence

MENLSHRDANQLKAKNHGGGVCLMSNTWRDEQHPSFINFMSNFLCTNSFRLNFVPIVPDLIFNCGGLSVAFAFLTSWDCSNTSSIFSRVQKLKKQFANFYVVVALPTKEQ
NGSFVQSYFRNGLEIGKPPFVAVQDIEMGFEKIVKIAHSRGACKQQDVMSKLKTERKRSVQVMDAFRRVMSSVPGLDDHDANSLNQAIGSIEAIAKASKEYILENTDLSV
EKAERIRTFFRDPKFYLSPKIN

Lsi03G004810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome