CuGenDBv2

Gene ID	Lsi03G004930
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Ribulose bisphosphate carboxylase large chain
Genome location	chr03:5657245..5659579
RNA-Seq Expression	Lsi03G004930
Synteny	Lsi03G004930
Gene Ontology terms	GO:0009853 - photorespiration (biological process) GO:0019253 - reductive pentose-phosphate cycle (biological process) GO:0009507 - chloroplast (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0004497 - monooxygenase activity (molecular function) GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domains	IPR017443 - Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal IPR033966 - RuBisCO IPR036422 - RuBisCO large subunit, N-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AAR98686.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Leontodon hispidus]

1.6e-34

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

ACB29074.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Hesperomannia arbuscula]

4.3e-35

98.67

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE KNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

CAJ86723.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Athanasia trifurcata]

1.6e-34

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

XP_042755668.1 ribulose bisphosphate carboxylase large chain-like [Lactuca sativa]

1.6e-34

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

XP_042756606.1 ribulose bisphosphate carboxylase large chain [Lactuca sativa]

1.6e-34

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

TrEMBL top hits

e value

%identity

Alignment

A0A345EZG6 Ribulose bisphosphate carboxylase large chain (Fragment)

7.9e-35

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

A0A3G1M608 Ribulose bisphosphate carboxylase large chain (Fragment)

7.9e-35

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

B2Y4U6 Ribulose bisphosphate carboxylase large chain

2.1e-35

98.67

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE KNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

E9NFR8 Ribulose-bisphosphate carboxylase (Fragment)

7.9e-35

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

G8DRZ8 Ribulose bisphosphate carboxylase large chain (Fragment)

7.9e-35

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

SwissProt top hits

e value

%identity

Alignment

P36478 Ribulose bisphosphate carboxylase large chain (Fragment)

2.1e-37

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

P48693 Ribulose bisphosphate carboxylase large chain

2.1e-37

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

P48697 Ribulose bisphosphate carboxylase large chain (Fragment)

2.1e-37

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

P48706 Ribulose bisphosphate carboxylase large chain

2.1e-37

97.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

Q37192 Ribulose bisphosphate carboxylase large chain

4.7e-37

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGE+NQYIAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00490.1 ribulose-bisphosphate carboxylases

1.9e-36

93.33

Show/hide

Query:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV
        PEYE K+TDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY IEPVPGEE Q+IAYV
Subjt:  PEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGCTTACTCACATACGTGTCATTGAGAGCTTTCTTGTTCTTATAAGTGGGAGTTATGGTCAAAATTCAATTGAATTGAGACATCTTTTAATTTTTCCTGAATATGA
AAACAAAAATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCTGAGGAAGCAGGGGCCGCCGTAGCTGCTGAATCTTCTACTGGTACATGGA
CAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGACGATGCTATGGAATCGAGCCTGTTCCTGGAGAAGAAAATCAATATATTGCTTATGTAACTTTA
ACTTTTGTAGTTGCCAAATGTTTTATCTACAAATGGAAATTATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLLTHIRVIESFLVLISGSYGQNSIELRHLLIFPEYENKNTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVTL
TFVVAKCFIYKWKL

Lsi03G004930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome