; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G005060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCBS domain-containing protein CBSX2, chloroplastic
Genome locationchr03:5857172..5860308
RNA-Seq ExpressionLsi03G005060
SyntenyLsi03G005060
Gene Ontology termsGO:0045454 - cell redox homeostasis (biological process)
InterPro domainsIPR000644 - CBS domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588674.1 CBS domain-containing protein CBSX1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.0e-5686.03Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGV-GGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL
        QALEVLVEK+LSGFPV+DDDWKLVGVVSDYDLLAL +ISGV GGGETNIFPDVNSSWK FK IQ LLSK NGEVV DLMTPAPLVVRE  NLE+AAR+LL
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGV-GGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL

Query:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTH
        ETK HRLPVVD +GKLVG+ITREDIVRAGL IKRTH
Subjt:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTH

TYK06762.1 CBS domain-containing protein CBSX2 [Cucumis melo var. makuwa]1.1e-6087.94Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL
        +ALEVLVEK++SGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+  NIFPDVN SW+SFKLIQ LLSKKNGE+VGDLMTPAPLVV E MN ENAARLLL
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL

Query:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI
        ETKFHRLPVVD EGKLVGIITREDIVR GL +KRTHSKELI
Subjt:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI

XP_004136971.1 CBS domain-containing protein CBSX2, chloroplastic [Cucumis sativus]1.4e-5788.89Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL
        +ALEVLVEK+LSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+  NIFPDVN SW+SFKLIQ LLSKKNGEVVGDLMTPAPLVV E MN ENAARLLL
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL

Query:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRT
        ETKFHRLPVVD EGKLVGIITREDIVR GL +KRT
Subjt:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRT

XP_008455519.1 PREDICTED: CBS domain-containing protein CBSX2, chloroplastic [Cucumis melo]1.1e-6087.94Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL
        +ALEVLVEK++SGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+  NIFPDVN SW+SFKLIQ LLSKKNGE+VGDLMTPAPLVV E MN ENAARLLL
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL

Query:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI
        ETKFHRLPVVD EGKLVGIITREDIVR GL +KRTHSKELI
Subjt:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI

XP_038888405.1 CBS domain-containing protein CBSX1, chloroplastic-like [Benincasa hispida]3.3e-6290.71Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLE
        +ALEVLVEK+LSGFPVVDDDWKLVGVVSDYDLLALDSISGVG  E NIFPDVNSSWKSFKLIQ LLSKKNGEVVGDLMTPAPLVVRE MNLE+AARLLLE
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLE

Query:  TKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI
        TKFH LPVVD EGKL+GIITREDIVRAGL +KRTHSKELI
Subjt:  TKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI

TrEMBL top hitse value%identityAlignment
A0A0A0K7X9 Uncharacterized protein6.9e-5888.89Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL
        +ALEVLVEK+LSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+  NIFPDVN SW+SFKLIQ LLSKKNGEVVGDLMTPAPLVV E MN ENAARLLL
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL

Query:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRT
        ETKFHRLPVVD EGKLVGIITREDIVR GL +KRT
Subjt:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRT

A0A1S3C189 CBS domain-containing protein CBSX2, chloroplastic5.1e-6187.94Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL
        +ALEVLVEK++SGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+  NIFPDVN SW+SFKLIQ LLSKKNGE+VGDLMTPAPLVV E MN ENAARLLL
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL

Query:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI
        ETKFHRLPVVD EGKLVGIITREDIVR GL +KRTHSKELI
Subjt:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI

A0A5D3C646 CBS domain-containing protein CBSX25.1e-6187.94Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL
        +ALEVLVEK++SGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+  NIFPDVN SW+SFKLIQ LLSKKNGE+VGDLMTPAPLVV E MN ENAARLLL
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLL

Query:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI
        ETKFHRLPVVD EGKLVGIITREDIVR GL +KRTHSKELI
Subjt:  ETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI

A0A6J1EM78 CBS domain-containing protein CBSX2, chloroplastic4.9e-5685.4Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGV--GGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLL
        QALEVLVEK+LSGFPV+DDDWKLVGVVSDYDLLAL +ISGV  GGGETNIFPDVNSSWK FK IQ LLSK NGEVV DLMTPAPLVVRE  NLE+AAR+L
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGV--GGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLL

Query:  LETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTH
        LETK HRLPVVD +GKLVG+ITREDIVRAGL IKRTH
Subjt:  LETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTH

A0A6J1JN04 CBS domain-containing protein CBSX1, chloroplastic6.0e-5471.6Show/hide
Query:  LSSINRSTTARYSI--------NLNFIPNLLLSIQALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLL
        LSS +  ++A Y +        NL  +       QALEVLVEK+LSGFPV+DDDWKLVGVVSDYDLLAL +ISGV   E NIFPDVNSSWK FK +Q LL
Subjt:  LSSINRSTTARYSI--------NLNFIPNLLLSIQALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLL

Query:  SKKNGEVVGDLMTPAPLVVRENMNLENAARLLLETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTH
        SK NGEVV DLMTPAPLVVRE MNLE+AAR+LLETK HRLPVVD +GKLVGIITREDIVRAGL IKRTH
Subjt:  SKKNGEVVGDLMTPAPLVVRENMNLENAARLLLETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTH

SwissProt top hitse value%identityAlignment
O23193 CBS domain-containing protein CBSX1, chloroplastic3.7e-4868.66Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLE
        +ALE+LVE  ++GFPV+D+DWKLVG+VSDYDLLALDSISG G  E ++FP+V+S+WK+F  +Q LLSK NG++VGDLMTPAPLVV E  NLE+AA++LLE
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLE

Query:  TKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRT
        TK+ RLPVVD +GKLVGIITR ++VRA L IKR+
Subjt:  TKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRT

O58045 Inosine-5'-monophosphate dehydrogenase1.7e-0829.84Show/hide
Query:  ALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLET
        AL ++ +  + G PVV+D+ K+VG+++  D+ A                                  + G++V +LMT   + V E++ +E A ++++E 
Subjt:  ALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLET

Query:  KFHRLPVVDFEGKLVGIITREDIV
        +  RLPVVD  GKLVG+IT  D+V
Subjt:  KFHRLPVVDFEGKLVGIITREDIV

Q58821 Uncharacterized protein MJ14265.2e-1031.85Show/hide
Query:  IQALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPD----VNSSWK-SFKLIQTLLSKKNG--EVVGDLMTPAPLVVRENMNLE
        I  + +  +  +SG PV++ D KLVG++S+ D+  + +I         I P     +    K + K+ + +   KN     V D+MT   +V + +M + 
Subjt:  IQALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPD----VNSSWK-SFKLIQTLLSKKNG--EVVGDLMTPAPLVVRENMNLE

Query:  NAARLLLETKFHRLPVVDFEGKLVGIITREDIVRA
        +AA+L+++    RLPVVD EG L+GI+TR D++ A
Subjt:  NAARLLLETKFHRLPVVDFEGKLVGIITREDIVRA

Q9C5D0 CBS domain-containing protein CBSX2, chloroplastic3.1e-4769.7Show/hide
Query:  ALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLET
        ALE+LVEK ++G PV+DD+W LVGVVSDYDLLALDSISG    +TN+FPDV+S+WK+F  +Q L+SK  G+VVGDLMTP+PLVVR++ NLE+AARLLLET
Subjt:  ALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLET

Query:  KFHRLPVVDFEGKLVGIITREDIVRAGLLIKR
        KF RLPVVD +GKL+GI+TR ++VRA L IKR
Subjt:  KFHRLPVVDFEGKLVGIITREDIVRAGLLIKR

Q9UY49 Inosine-5'-monophosphate dehydrogenase5.7e-0929.84Show/hide
Query:  ALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLET
        AL ++ + ++ G PVV+++ K+VG++S  D+ A                                  + G++V +LMT   + V EN+ +E A ++++E 
Subjt:  ALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLET

Query:  KFHRLPVVDFEGKLVGIITREDIV
        +  RLPVVD EG+L+G+IT  D+V
Subjt:  KFHRLPVVDFEGKLVGIITREDIV

Arabidopsis top hitse value%identityAlignment
AT4G34120.1 Cystathionine beta-synthase (CBS) family protein2.2e-4869.7Show/hide
Query:  ALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLET
        ALE+LVEK ++G PV+DD+W LVGVVSDYDLLALDSISG    +TN+FPDV+S+WK+F  +Q L+SK  G+VVGDLMTP+PLVVR++ NLE+AARLLLET
Subjt:  ALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLET

Query:  KFHRLPVVDFEGKLVGIITREDIVRAGLLIKR
        KF RLPVVD +GKL+GI+TR ++VRA L IKR
Subjt:  KFHRLPVVDFEGKLVGIITREDIVRAGLLIKR

AT4G36910.1 Cystathionine beta-synthase (CBS) family protein2.6e-4968.66Show/hide
Query:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLE
        +ALE+LVE  ++GFPV+D+DWKLVG+VSDYDLLALDSISG G  E ++FP+V+S+WK+F  +Q LLSK NG++VGDLMTPAPLVV E  NLE+AA++LLE
Subjt:  QALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPAPLVVRENMNLENAARLLLE

Query:  TKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRT
        TK+ RLPVVD +GKLVGIITR ++VRA L IKR+
Subjt:  TKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATCTATCTTCGATCAATAGATCAACCACAGCAAGATACTCAATAAATCTTAATTTTATACCTAATTTATTATTGTCTATTCAAGCCTTGGAGGTTCTGGTGGA
GAAGAATCTATCTGGATTTCCTGTAGTTGATGACGACTGGAAACTGGTTGGCGTTGTCTCAGATTATGATTTGTTAGCATTGGACTCAATTTCAGGTGTGGGTGGTGGTG
AGACTAATATATTTCCAGATGTCAACAGTAGCTGGAAAAGCTTCAAGTTGATACAGACATTGTTGAGCAAGAAGAATGGGGAAGTTGTAGGAGATTTAATGACACCTGCT
CCATTGGTTGTTCGTGAAAACATGAACTTGGAAAATGCTGCCAGGTTGTTGCTTGAAACAAAGTTCCACCGTTTACCGGTGGTAGACTTTGAAGGGAAGCTGGTGGGGAT
CATTACAAGAGAAGACATAGTTAGAGCTGGTCTTTTGATCAAGCGTACACATTCAAAAGAGTTAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATATCTATCTTCGATCAATAGATCAACCACAGCAAGATACTCAATAAATCTTAATTTTATACCTAATTTATTATTGTCTATTCAAGCCTTGGAGGTTCTGGTGGA
GAAGAATCTATCTGGATTTCCTGTAGTTGATGACGACTGGAAACTGGTTGGCGTTGTCTCAGATTATGATTTGTTAGCATTGGACTCAATTTCAGGTGTGGGTGGTGGTG
AGACTAATATATTTCCAGATGTCAACAGTAGCTGGAAAAGCTTCAAGTTGATACAGACATTGTTGAGCAAGAAGAATGGGGAAGTTGTAGGAGATTTAATGACACCTGCT
CCATTGGTTGTTCGTGAAAACATGAACTTGGAAAATGCTGCCAGGTTGTTGCTTGAAACAAAGTTCCACCGTTTACCGGTGGTAGACTTTGAAGGGAAGCTGGTGGGGAT
CATTACAAGAGAAGACATAGTTAGAGCTGGTCTTTTGATCAAGCGTACACATTCAAAAGAGTTAATATGATTGAGAAGAAACATTTTGAAGATCGAAAAATTTAGAAGGC
TCATTCACAAAGAATGATGTTGTCTATTTATATGGATAGGAATCACCAATTATTTTTTATAAGCTCATAACAATTTTGACTCTCATTTAATGTGTAGCATCATTCATTTA
TCCCATAGTTTATTGATATATTTTTTTCATAGTTTATTGATATATAGTTTATTAATTTTGTTTATAGTTT
Protein sequenceShow/hide protein sequence
MEYLSSINRSTTARYSINLNFIPNLLLSIQALEVLVEKNLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKLIQTLLSKKNGEVVGDLMTPA
PLVVRENMNLENAARLLLETKFHRLPVVDFEGKLVGIITREDIVRAGLLIKRTHSKELI