; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G005120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscriptional regulator
Genome locationchr03:5942218..5946566
RNA-Seq ExpressionLsi03G005120
SyntenyLsi03G005120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD41343.1 TPA_asm: hypothetical protein HUJ06_015666 [Nelumbo nucifera]4.1e-1740.77Show/hide
Query:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG
        MPQ++   +Q+  A++ +A N    P  +V+ H+   IP    A  QN  REDRRH+SRRR ++  R + + H+P  LV V+ +++D + A GE+++L G
Subjt:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG

Query:  FAFVIGLRFGLKQKFLHLAHFGCVLDIVRF
         AFV+ L  G + + LHLAH G VLD+V F
Subjt:  FAFVIGLRFGLKQKFLHLAHFGCVLDIVRF

EYU34561.1 hypothetical protein MIMGU_mgv1a014739mg [Erythranthe guttata]4.5e-1643.94Show/hide
Query:  LHHKMPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEE
        L +KM   I R H+I PA++L+A   ++L   +++E M FR+P   FA  ++ RRE RRH  RR R VP+RPV +  IP +LV +V QIV AE A GEEE
Subjt:  LHHKMPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEE

Query:  ILNGFAFVIGLRFGLKQKFLHLAHFGCVLDIV
        +L+G A V  L    + +  H+   G VL +V
Subjt:  ILNGFAFVIGLRFGLKQKFLHLAHFGCVLDIV

KAF5444354.1 hypothetical protein F2P56_036839 [Juglans regia]2.4e-1739.64Show/hide
Query:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG
        MPQ+IH F+ I  A++ +A  P +L   +V+EHMG   P  A A RQ++RRE  RH +     VPT  +D+N++P  +VNVV ++VD+E AF E+E+L+ 
Subjt:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG

Query:  FAFVIGLRFGLKQKFLHLAHFGCVLDIVRFSS-------GEHSDAAV--------VEGAPEEGFVGR---------RARGERGGDGGKLGGGHV-GFGGV
         A V    FG   +  H+   G V  +V F S       G+   A V        VEG PEEG VG          RA  +  G G +LGG HV   G V
Subjt:  FAFVIGLRFGLKQKFLHLAHFGCVLDIVRFSS-------GEHSDAAV--------VEGAPEEGFVGR---------RARGERGGDGGKLGGGHV-GFGGV

Query:  RVGGGVVEKGRGNGMGEGGGAG
        R  GGVVE+  G+G  E  G G
Subjt:  RVGGGVVEKGRGNGMGEGGGAG

PON40830.1 hypothetical protein PanWU01x14_294330 [Parasponia andersonii]8.0e-2141.28Show/hide
Query:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG
        MPQRI   HQI   +KLL  NPL+L   +++EH+G        A  QNS  E+ RH +RRRR + T P++E H+P DLV VVRQIVD +FA  EEEILNG
Subjt:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG

Query:  FAFVIGLRFGLKQKFLHLAHFGCVLDIVRFSS---------------GEHSDAAVVEGAP----------EEGFVGRRARGERGGDGGKLGGGHVGFGGV
         A V G R   +++ L +     VL +V                    EH  A VV+G P          EE   G  A  ERG  G  LGGGH    G 
Subjt:  FAFVIGLRFGLKQKFLHLAHFGCVLDIVRFSS---------------GEHSDAAVVEGAP----------EEGFVGRRARGERGGDGGKLGGGHVGFGGV

Query:  RVGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGGG
           GGVV++G G+G  E         GGV  GGGG
Subjt:  RVGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGGG

PON88101.1 LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_161270 [Trema orientale]2.3e-2040.34Show/hide
Query:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG
        MPQRI+  HQI   +KL+  NPL+L   +++EH+         A  Q+S  E+ RH +RR R + T P++E+H+P DLV VVRQIVD +FA  EEE+LNG
Subjt:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG

Query:  FAFVIGLRFGLKQKFLHLAHFGCVLDIV--------------RFSSGEHSDAAVVEGAPEEGFVGRR----------ARGERGGDGGKLGGGHVGFGGVR
         A V G R   +++ L +     VL +V                +  EH  A VV+G PEE  VG            A  ERG  G  LGGGH   GG  
Subjt:  FAFVIGLRFGLKQKFLHLAHFGCVLDIV--------------RFSSGEHSDAAVVEGAPEEGFVGRR----------ARGERGGDGGKLGGGHVGFGGVR

Query:  VGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGG
          GGVVE+G G+G  E         GGV  GGG
Subjt:  VGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGG

TrEMBL top hitse value%identityAlignment
A0A2P5AW99 Uncharacterized protein3.9e-2141.28Show/hide
Query:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG
        MPQRI   HQI   +KLL  NPL+L   +++EH+G        A  QNS  E+ RH +RRRR + T P++E H+P DLV VVRQIVD +FA  EEEILNG
Subjt:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG

Query:  FAFVIGLRFGLKQKFLHLAHFGCVLDIVRFSS---------------GEHSDAAVVEGAP----------EEGFVGRRARGERGGDGGKLGGGHVGFGGV
         A V G R   +++ L +     VL +V                    EH  A VV+G P          EE   G  A  ERG  G  LGGGH    G 
Subjt:  FAFVIGLRFGLKQKFLHLAHFGCVLDIVRFSS---------------GEHSDAAVVEGAP----------EEGFVGRRARGERGGDGGKLGGGHVGFGGV

Query:  RVGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGGG
           GGVV++G G+G  E         GGV  GGGG
Subjt:  RVGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGGG

A0A2P5ERD6 Uncharacterized protein1.1e-2040.34Show/hide
Query:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG
        MPQRI+  HQI   +KL+  NPL+L   +++EH+         A  Q+S  E+ RH +RR R + T P++E+H+P DLV VVRQIVD +FA  EEE+LNG
Subjt:  MPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNG

Query:  FAFVIGLRFGLKQKFLHLAHFGCVLDIV--------------RFSSGEHSDAAVVEGAPEEGFVGRR----------ARGERGGDGGKLGGGHVGFGGVR
         A V G R   +++ L +     VL +V                +  EH  A VV+G PEE  VG            A  ERG  G  LGGGH   GG  
Subjt:  FAFVIGLRFGLKQKFLHLAHFGCVLDIV--------------RFSSGEHSDAAVVEGAPEEGFVGRR----------ARGERGGDGGKLGGGHVGFGGVR

Query:  VGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGG
          GGVVE+G G+G  E         GGV  GGG
Subjt:  VGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGG

A0A5A7QMN2 Transcriptional regulator5.4e-1537.91Show/hide
Query:  LHHKMPQR--IHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGE
        L H++  R  + R HQI PAKKL+A +P+ L   +V+EH+  R+     A R++  RE+  H SRR   VP RPV +++IP DLV++V Q+V+ + A  E
Subjt:  LHHKMPQR--IHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGE

Query:  EEILNGFAFVIGL---------RFGLKQKFLH---------LAHFGCVLDIVRFSSGEHSDAAVVEGAPEEGFVGRRARGERGGDGGKLGGGHVGFGGVR
        E+IL+G A V G            G  ++ LH         L H G V+ ++     E   A +VEG PEEG VG     E    GG L  G     GVR
Subjt:  EEILNGFAFVIGL---------RFGLKQKFLH---------LAHFGCVLDIVRFSSGEHSDAAVVEGAPEEGFVGRRARGERGGDGGKLGGGHVGFGGVR

Query:  VGGGVVEKGRG
        VG  V   G G
Subjt:  VGGGVVEKGRG

A0A6J5Y615 Uncharacterized protein3.3e-1244.29Show/hide
Query:  FASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNGFAFVIGLRFGLKQKFL---------HLAHFGCVLDIVRFSSG
        FA  QNS  EDRRH  R RR VPT PVD+NHIP DLV VVRQ+VD   A  E++IL+  A V  L  G +++           H+  FG V+ +  F  G
Subjt:  FASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFGEEEILNGFAFVIGLRFGLKQKFL---------HLAHFGCVLDIVRFSSG

Query:  --------EHSDAAVVEGAPEEGFVGR----------RARGERGGDGGKLGGGHVGF-GGVRVGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGGGGEGR
                E   A V+EG  EEG VG              GE GG GG L  GHVG   GVR   GVV+K   NG  E    G G  GGV  G G  +G 
Subjt:  --------EHSDAAVVEGAPEEGFVGR----------RARGERGGDGGKLGGGHVGF-GGVRVGGGVVEKGRGNGMGEGGGAGAGAAGGVAGGGGGGEGR

Query:  VNEGESEGESEEGKEGEEP
        V E ESE E EEG+E E+P
Subjt:  VNEGESEGESEEGKEGEEP

A0A7C8ZU93 Uncharacterized protein7.5e-1740.43Show/hide
Query:  HHKMPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFAS----RQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFG
        HHKM Q I   H+I P +KLL V+PL LPP L+++HM  R+   + +S      +   E  RH   R R VP+RP++ENHIP +++ ++ QI+D + A  
Subjt:  HHKMPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFAS----RQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVNVVRQIVDAEFAFG

Query:  EEEILNGFAFVIGLRFGLKQKFLHLAHFGCVLDIVRFSSGE
        EE++L+    V  +   +    L LAHFG  L++V F SGE
Subjt:  EEEILNGFAFVIGLRFGLKQKFLHLAHFGCVLDIVRFSSGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTGATGAGAAGGAAAAAGAGGACCCGAAGAAGAATTCTTACAGAATCTTCCGCCATTCCCTTCCGTTGCCTTCTCCACCACAAAATGCCCCAACGAATCCATCG
ATTCCACCAAATTTTCCCGGCAAAGAAACTCCTCGCTGTAAATCCTCTCAACCTCCCGCCCCATCTCGTGAACGAACACATGGGTTTTCGAATTCCGTTTACCGCATTTG
CTTCTCGCCAAAACTCCCGCCGTGAAGATCGCCGACATTCTTCCCGGCGACGCCGCATTGTACCCACGAGGCCCGTCGACGAGAATCACATCCCATGGGACTTGGTAAAT
GTGGTTAGGCAAATCGTTGATGCCGAGTTTGCATTCGGAGAAGAGGAGATTCTGAACGGGTTTGCATTCGTTATCGGCTTGAGATTTGGCCTGAAACAGAAGTTCCTTCA
TCTCGCTCACTTTGGTTGTGTATTGGACATCGTACGCTTCAGTTCCGGGGAACACAGTGACGCCGCCGTGGTTGAGGGCGCGCCAGAGGAGGGATTCGTGGGCCGGAGAG
CAAGGGGAGAGCGCGGCGGCGATGGAGGAAAGCTCGGCGGTGGACATGTGGGGTTTGGTGGAGTTCGTGTCGGCGGCGGCGTAGTGGAGAAGGGCAGAGGAAATGGAATG
GGGGAGGGCGGTGGAGCTGGCGCCGGGGCTGCCGGCGGAGTGGCGGGCGGTGGCGGAGGAGGAGAAGGTAGAGTTAATGAGGGTGAGAGTGAAGGCGAGAGTGAAGAAGG
TAAGGAAGGAGAAGAGCCAGCGGCGGGGGGTGAGAGTGGCGACGCCGGTAGCGGCGGTGGGGGCGGAGAGGGCTTGCTTGTGGATGGAAGGGTGGAGGAGGATGAGCTTG
GCGTTGGCGAGAGAAATGGGAAATGGACGGAGAAGAGAAGTTTCGATTTGTATTTTAAGGAGAGTGAGAGAGAAGATGACAGTGAAAATTCACGGACTGTGGTGGCGCGT
GAGGGTGAAGTAAATGTTAAGATATTTATTATTCTTTTAGAGATTAAAAATATCTGTTTTAAAAACATATATTATGTTCAACAACCATTTTCAAGATCACTTCTTGAAAA
GTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATTGATGAGAAGGAAAAAGAGGACCCGAAGAAGAATTCTTACAGAATCTTCCGCCATTCCCTTCCGTTGCCTTCTCCACCACAAAATGCCCCAACGAATCCATCG
ATTCCACCAAATTTTCCCGGCAAAGAAACTCCTCGCTGTAAATCCTCTCAACCTCCCGCCCCATCTCGTGAACGAACACATGGGTTTTCGAATTCCGTTTACCGCATTTG
CTTCTCGCCAAAACTCCCGCCGTGAAGATCGCCGACATTCTTCCCGGCGACGCCGCATTGTACCCACGAGGCCCGTCGACGAGAATCACATCCCATGGGACTTGGTAAAT
GTGGTTAGGCAAATCGTTGATGCCGAGTTTGCATTCGGAGAAGAGGAGATTCTGAACGGGTTTGCATTCGTTATCGGCTTGAGATTTGGCCTGAAACAGAAGTTCCTTCA
TCTCGCTCACTTTGGTTGTGTATTGGACATCGTACGCTTCAGTTCCGGGGAACACAGTGACGCCGCCGTGGTTGAGGGCGCGCCAGAGGAGGGATTCGTGGGCCGGAGAG
CAAGGGGAGAGCGCGGCGGCGATGGAGGAAAGCTCGGCGGTGGACATGTGGGGTTTGGTGGAGTTCGTGTCGGCGGCGGCGTAGTGGAGAAGGGCAGAGGAAATGGAATG
GGGGAGGGCGGTGGAGCTGGCGCCGGGGCTGCCGGCGGAGTGGCGGGCGGTGGCGGAGGAGGAGAAGGTAGAGTTAATGAGGGTGAGAGTGAAGGCGAGAGTGAAGAAGG
TAAGGAAGGAGAAGAGCCAGCGGCGGGGGGTGAGAGTGGCGACGCCGGTAGCGGCGGTGGGGGCGGAGAGGGCTTGCTTGTGGATGGAAGGGTGGAGGAGGATGAGCTTG
GCGTTGGCGAGAGAAATGGGAAATGGACGGAGAAGAGAAGTTTCGATTTGTATTTTAAGGAGAGTGAGAGAGAAGATGACAGTGAAAATTCACGGACTGTGGTGGCGCGT
GAGGGTGAAGTAAATGTTAAGATATTTATTATTCTTTTAGAGATTAAAAATATCTGTTTTAAAAACATATATTATGTTCAACAACCATTTTCAAGATCACTTCTTGAAAA
GTTATAG
Protein sequenceShow/hide protein sequence
MRLMRRKKRTRRRILTESSAIPFRCLLHHKMPQRIHRFHQIFPAKKLLAVNPLNLPPHLVNEHMGFRIPFTAFASRQNSRREDRRHSSRRRRIVPTRPVDENHIPWDLVN
VVRQIVDAEFAFGEEEILNGFAFVIGLRFGLKQKFLHLAHFGCVLDIVRFSSGEHSDAAVVEGAPEEGFVGRRARGERGGDGGKLGGGHVGFGGVRVGGGVVEKGRGNGM
GEGGGAGAGAAGGVAGGGGGGEGRVNEGESEGESEEGKEGEEPAAGGESGDAGSGGGGGEGLLVDGRVEEDELGVGERNGKWTEKRSFDLYFKESEREDDSENSRTVVAR
EGEVNVKIFIILLEIKNICFKNIYYVQQPFSRSLLEKL