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Lsi03G005160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:5962222..5962551
RNA-Seq ExpressionLsi03G005160
SyntenyLsi03G005160
Gene Ontology termsGO:0046916 - cellular transition metal ion homeostasis (biological process)
GO:0051179 - localization (biological process)
GO:0016020 - membrane (cellular component)
GO:0046915 - transition metal ion transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646140.1 hypothetical protein Csa_015664 [Cucumis sativus]1.0e-1651.33Show/hide
Query:  MVVSKETVVIFIGVLLFSMNFVEIASAIRSIKQVPLEDEANVVYSP---RVPIELHDDANQYARWNNPIDHCKSPQDCQYRIHGDEVRNMV-VDTSKNVK
        MVVSK+ + +FIG+LLFS+NFVEIASA R IK+ P ED   VV  P    +  EL DDA +YA W N +  CKS +  ++ I+ D+V N   V+TS+NVK
Subjt:  MVVSKETVVIFIGVLLFSMNFVEIASAIRSIKQVPLEDEANVVYSP---RVPIELHDDANQYARWNNPIDHCKSPQDCQYRIHGDEVRNMV-VDTSKNVK

Query:  GDKDIVRPLPYIV
        GDKD     P+IV
Subjt:  GDKDIVRPLPYIV
KGN44636.2 hypothetical protein Csa_016656 [Cucumis sativus]6.7e-1650.44Show/hide
Query:  MVVSKETVVIFIGVLLFSMNFVEIASAIRSIKQVPLEDEANVVYSP---RVPIELHDDANQYARWNNPIDHCKSPQDCQYRIHGDEVRNMV-VDTSKNVK
        MVVSK+ + +FIG+LLFS+NFVEIASA R IK+    D   VV  P    +  EL DDA +YA W N +  CKS +  ++ I+GD+V N   V+TS+NVK
Subjt:  MVVSKETVVIFIGVLLFSMNFVEIASAIRSIKQVPLEDEANVVYSP---RVPIELHDDANQYARWNNPIDHCKSPQDCQYRIHGDEVRNMV-VDTSKNVK

Query:  GDKDIVRPLPYIV
        GDKD     P+IV
Subjt:  GDKDIVRPLPYIV
TrEMBL top hitse value%identityAlignment
A0A0A0K3T5 Uncharacterized protein2.7e-1549.56Show/hide
Query:  MVVSKETVVIFIGVLLFSMNFVEIASAIRSIKQVPLEDEANVVYSP---RVPIELHDDANQYARWNNPIDHCKSPQDCQYRIHGDEVRNMV-VDTSKNVK
        MVVSK+ + +FIG+LLFS+NFVEIASA R IK+    D   VV  P    +  EL DDA +YA W N +  CKS +  ++ I+ D+V N   V+TS+NVK
Subjt:  MVVSKETVVIFIGVLLFSMNFVEIASAIRSIKQVPLEDEANVVYSP---RVPIELHDDANQYARWNNPIDHCKSPQDCQYRIHGDEVRNMV-VDTSKNVK

Query:  GDKDIVRPLPYIV
        GDKD     P+IV
Subjt:  GDKDIVRPLPYIV
A0A0A0K605 Uncharacterized protein3.2e-1650.44Show/hide
Query:  MVVSKETVVIFIGVLLFSMNFVEIASAIRSIKQVPLEDEANVVYSP---RVPIELHDDANQYARWNNPIDHCKSPQDCQYRIHGDEVRNMV-VDTSKNVK
        MVVSK+ + +FIG+LLFS+NFVEIASA R IK+    D   VV  P    +  EL DDA +YA W N +  CKS +  ++ I+GD+V N   V+TS+NVK
Subjt:  MVVSKETVVIFIGVLLFSMNFVEIASAIRSIKQVPLEDEANVVYSP---RVPIELHDDANQYARWNNPIDHCKSPQDCQYRIHGDEVRNMV-VDTSKNVK

Query:  GDKDIVRPLPYIV
        GDKD     P+IV
Subjt:  GDKDIVRPLPYIV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTTTCCAAAGAGACCGTAGTTATTTTTATTGGTGTGCTTTTGTTTAGCATGAACTTTGTTGAAATTGCAAGTGCAATTAGATCTATCAAACAAGTTCCTCTTGA
AGATGAAGCCAATGTTGTATATAGTCCAAGAGTTCCTATAGAACTACATGATGATGCTAATCAATATGCAAGATGGAACAATCCAATTGATCACTGCAAATCTCCACAAG
ACTGCCAATATAGGATTCATGGAGATGAAGTAAGAAATATGGTTGTTGACACCTCAAAAAATGTTAAAGGGGATAAAGATATCGTTCGTCCTCTACCATACATTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTTTCCAAAGAGACCGTAGTTATTTTTATTGGTGTGCTTTTGTTTAGCATGAACTTTGTTGAAATTGCAAGTGCAATTAGATCTATCAAACAAGTTCCTCTTGA
AGATGAAGCCAATGTTGTATATAGTCCAAGAGTTCCTATAGAACTACATGATGATGCTAATCAATATGCAAGATGGAACAATCCAATTGATCACTGCAAATCTCCACAAG
ACTGCCAATATAGGATTCATGGAGATGAAGTAAGAAATATGGTTGTTGACACCTCAAAAAATGTTAAAGGGGATAAAGATATCGTTCGTCCTCTACCATACATTGTTTAA
Protein sequenceShow/hide protein sequence
MVVSKETVVIFIGVLLFSMNFVEIASAIRSIKQVPLEDEANVVYSPRVPIELHDDANQYARWNNPIDHCKSPQDCQYRIHGDEVRNMVVDTSKNVKGDKDIVRPLPYIV