; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G005170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G005170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLeucine-rich repeat family protein
Genome locationchr03:5971959..5972429
RNA-Seq ExpressionLsi03G005170
SyntenyLsi03G005170
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031320.1 leucine-rich repeat family protein [Cucumis melo var. makuwa]8.2e-7688.39Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIGLLENTILFDAS N+LTGPIP+SFAC+AK++LLNFADN  YGAVPE VCKLPN+QN TLRNNF TQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFP
        ECTHFFT+VE C DEKSMKYIPCKG+WYLNEDPA VLRRPARKVTEMRTYAAL P
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFP

KAG6588675.1 hypothetical protein SDJN03_17240, partial [Cucurbita argyrosperma subsp. sororia]6.3e-7685.26Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIG L+NT+LFDASKN+LTGPIP+SF C+AKMELLNFADNH YGAVPE +CKLP LQ+ TLRNNFFTQ+GPVCRSLI KK LDVSGNCI+GLPEQRSEE
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH
        ECTHFFTNV+ CHDEKSMKYIPC GNWYLNEDPA VLRRPARK TEMRTYAAL PH
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH

KAG7022462.1 hypothetical protein SDJN02_16193, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-7685.26Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIG L+NT+LFDASKN+LTGPIP+SF C+AKMELLNFADNH YGAVPE +CKLP LQ+ TLRNNFFTQ+GPVCRSLI KK LDVSGNCI+GLPEQRSEE
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH
        ECTHFFTNV+ CHDEKSMKYIPC GNWYLNEDPA VLRRPARK TEMRTYAAL PH
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH

XP_022989512.1 uncharacterized protein At4g06744-like [Cucurbita maxima]1.7e-7685.9Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIG L+NT+LFDASKN+LTGPIP+SF C+AKMELLNFADNH YGAVPE +CKLP LQN TLRNNFFTQ+GPVCRSLI KK LDVSGNCI+GLPEQRSEE
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH
        ECTHFFTNV+ CHDEKSMKYIPC GNWYLNEDPA VLRRPARK TEMRTYAAL PH
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH

XP_038887135.1 uncharacterized protein At4g06744-like [Benincasa hispida]2.8e-8494.87Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIGLLEN +LFDASKN+LTGPIPHSFAC+AKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCR+LISKKVLDVSGNCILGLPEQRSEE
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH
        ECTHFFTNVEYC DEKSMKYIPCKGNWYLNEDPA VLRRPARKVTEMRTYAAL PH
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH

TrEMBL top hitse value%identityAlignment
A0A1S4E0C6 uncharacterized protein At4g06744-like4.0e-7688.39Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIGLLENTILFDAS N+LTGPIP+SFAC+AK++LLNFADN  YGAVPE VCKLPN+QN TLRNNF TQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFP
        ECTHFFT+VE C DEKSMKYIPCKG+WYLNEDPA VLRRPARKVTEMRTYAAL P
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFP

A0A5A7SKQ4 Leucine-rich repeat family protein4.0e-7688.39Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIGLLENTILFDAS N+LTGPIP+SFAC+AK++LLNFADN  YGAVPE VCKLPN+QN TLRNNF TQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFP
        ECTHFFT+VE C DEKSMKYIPCKG+WYLNEDPA VLRRPARKVTEMRTYAAL P
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFP

A0A6J1EHZ1 uncharacterized protein At4g06744-like8.9e-7684.62Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIG L+NT+LFDASKN+LTGPIP+SF C+AKMELLNFADNH YGAVPE +CKLP LQ+ TLRNNFFTQ+GPVCRSLI KK LDVSGNCI+GLPEQRSEE
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH
        EC+HFFTNV+ CHDEKSMKYIPC GNWYLNEDPA VLRRPARK TEMRTYAAL PH
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH

A0A6J1I680 uncharacterized protein At4g06744-like6.3e-7482.69Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIG+LENTILFDASKN LTGPIP+SF C+AKMELLNFADN  YGA+PE VC+LP+LQNFTLRNN+FTQVGPVCRSLI KK+LDVSGNCILGLP+Q+S+E
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH
        ECTHFF++V+YC DEKSMKYIPCKG WYLNEDPA  LRRPARK TEMRTY AL PH
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH

A0A6J1JG14 uncharacterized protein At4g06744-like8.0e-7785.9Show/hide
Query:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE
        MEIG L+NT+LFDASKN+LTGPIP+SF C+AKMELLNFADNH YGAVPE +CKLP LQN TLRNNFFTQ+GPVCRSLI KK LDVSGNCI+GLPEQRSEE
Subjt:  MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH
        ECTHFFTNV+ CHDEKSMKYIPC GNWYLNEDPA VLRRPARK TEMRTYAAL PH
Subjt:  ECTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH

SwissProt top hitse value%identityAlignment
O48809 Leucine-rich repeat extensin-like protein 26.6e-2044.66Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKK-VLDVSGNCILGLPEQRSEE
        +IG L+N  +FD S N L+GP+P S   +  +E LN A+N F G +P ++C+L NL+NFT  +NFFT   P C +L+    V++ S NCI G  +QRS +
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKK-VLDVSGNCILGLPEQRSEE

Query:  ECT
        EC+
Subjt:  ECT

O65375 Leucine-rich repeat extensin-like protein 12.1e-1837.5Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVC-RSLISKKVLDVSGNCILGLPEQRSEE
        +IG L+   +FD + N L GP+P S   +  +E L+ A+N F G +P ++C+L NL+NFT  +N+F+   P+C  SL++  V++ + NCI GL  QRS++
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVC-RSLISKKVLDVSGNCILGLPEQRSEE

Query:  ECTHFFTNVEYC
        +C+        C
Subjt:  ECTHFFTNVEYC

Q8W3M4 Uncharacterized protein At4g067442.1e-2648.03Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKL--PNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSE
        EIG L    + D   N LTGP+P S  C+ K+E LNFA N  +GAVPEAVC L   NL N +L +N+FT VGP CR L+ K VLDV  NCI   P QRS 
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKL--PNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSE

Query:  EECTHFFTNVE--YCHDEKSMKYIPCK
        +EC  FF   +  YC       +  C+
Subjt:  EECTHFFTNVE--YCHDEKSMKYIPCK

Q9LHF1 Leucine-rich repeat extensin-like protein 47.3e-1942.45Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE
        +IG L+N  +FD S N L GP+P S   + ++E LN A N   G +P ++C+LP L+NFT   NFFT   PVC  L      D   NC+ G P QRS  +
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE

Query:  CTHFFT
        C+ F +
Subjt:  CTHFFT

Q9T0K5 Leucine-rich repeat extensin-like protein 34.8e-1842.45Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE
        +IG L+N  +FD S N L GP+P S   +  +E LN A N   G +P ++C+LP L+NFT   NFFT   PVC  L      D   NC+ G P QRS  +
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE

Query:  CTHFFT
        C  F +
Subjt:  CTHFFT

Arabidopsis top hitse value%identityAlignment
AT1G49750.1 Leucine-rich repeat (LRR) family protein8.0e-3746.1Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE
        +IG L    +FD   N LTGPIP+SF C+  ME LN A N FYG +PE VC++  LQN +L NN+FTQVGP CR LI +K++DVS NCIL LP Q++  E
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE

Query:  CTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFP
        C  FF   + C + KS+  +PC  N    +     L     +V+   TY  L P
Subjt:  CTHFFTNVEYCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFP

AT1G62440.1 leucine-rich repeat/extensin 24.7e-2144.66Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKK-VLDVSGNCILGLPEQRSEE
        +IG L+N  +FD S N L+GP+P S   +  +E LN A+N F G +P ++C+L NL+NFT  +NFFT   P C +L+    V++ S NCI G  +QRS +
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKK-VLDVSGNCILGLPEQRSEE

Query:  ECT
        EC+
Subjt:  ECT

AT3G19320.1 Leucine-rich repeat (LRR) family protein5.7e-3553.28Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE
        +IG L    +FD   N LTGPIP+SF C+ KME LN A N+FYG +PE VC+L  L+N +L  N+FTQVGP CR+LI +K+LDV  NCIL L  QR+  E
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE

Query:  CTHFFTNVEYCHDEKSMKYIPC
        C  FF   + C + KS  Y+PC
Subjt:  CTHFFTNVEYCHDEKSMKYIPC

AT3G24480.1 Leucine-rich repeat (LRR) family protein5.2e-2042.45Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE
        +IG L+N  +FD S N L GP+P S   + ++E LN A N   G +P ++C+LP L+NFT   NFFT   PVC  L      D   NC+ G P QRS  +
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEE

Query:  CTHFFT
        C+ F +
Subjt:  CTHFFT

AT4G06744.1 Leucine-rich repeat (LRR) family protein1.5e-2748.03Show/hide
Query:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKL--PNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSE
        EIG L    + D   N LTGP+P S  C+ K+E LNFA N  +GAVPEAVC L   NL N +L +N+FT VGP CR L+ K VLDV  NCI   P QRS 
Subjt:  EIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKL--PNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSE

Query:  EECTHFFTNVE--YCHDEKSMKYIPCK
        +EC  FF   +  YC       +  C+
Subjt:  EECTHFFTNVE--YCHDEKSMKYIPCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGGTCTTTTAGAGAACACCATTCTCTTCGACGCAAGCAAAAACAACCTCACCGGCCCAATCCCACATTCCTTCGCCTGCGTAGCCAAAATGGAGCTTCTCAA
TTTCGCCGACAACCACTTCTACGGCGCCGTTCCGGAGGCCGTCTGCAAATTACCAAACCTCCAAAACTTCACCCTCCGCAACAATTTCTTCACCCAAGTCGGCCCCGTCT
GCCGGAGCTTGATCTCGAAGAAAGTTCTAGACGTTTCTGGAAACTGCATTTTGGGTCTGCCGGAACAGAGATCGGAAGAGGAATGTACACATTTCTTCACCAATGTTGAG
TATTGTCATGATGAGAAGTCAATGAAATACATTCCTTGTAAAGGGAATTGGTATTTGAATGAAGATCCGGCCACCGTGCTCCGACGGCCGGCGAGGAAAGTGACGGAGAT
GAGAACTTACGCGGCTCTGTTCCCTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGGTCTTTTAGAGAACACCATTCTCTTCGACGCAAGCAAAAACAACCTCACCGGCCCAATCCCACATTCCTTCGCCTGCGTAGCCAAAATGGAGCTTCTCAA
TTTCGCCGACAACCACTTCTACGGCGCCGTTCCGGAGGCCGTCTGCAAATTACCAAACCTCCAAAACTTCACCCTCCGCAACAATTTCTTCACCCAAGTCGGCCCCGTCT
GCCGGAGCTTGATCTCGAAGAAAGTTCTAGACGTTTCTGGAAACTGCATTTTGGGTCTGCCGGAACAGAGATCGGAAGAGGAATGTACACATTTCTTCACCAATGTTGAG
TATTGTCATGATGAGAAGTCAATGAAATACATTCCTTGTAAAGGGAATTGGTATTTGAATGAAGATCCGGCCACCGTGCTCCGACGGCCGGCGAGGAAAGTGACGGAGAT
GAGAACTTACGCGGCTCTGTTCCCTCATTAA
Protein sequenceShow/hide protein sequence
MEIGLLENTILFDASKNNLTGPIPHSFACVAKMELLNFADNHFYGAVPEAVCKLPNLQNFTLRNNFFTQVGPVCRSLISKKVLDVSGNCILGLPEQRSEEECTHFFTNVE
YCHDEKSMKYIPCKGNWYLNEDPATVLRRPARKVTEMRTYAALFPH