CuGenDBv2

Gene ID	Lsi03G005300
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein TIC 21, chloroplastic
Genome location	chr03:6246369..6254860
RNA-Seq Expression	Lsi03G005300
Synteny	Lsi03G005300
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR022051 - Protein of unknown function DUF3611

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571949.1 Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

5.5e-120

89.81

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Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE
        MQSLLSPV R GPFP +AA+YTS+LHL+ F+RRPFSVR++SN  SP NSLPSFSAIRP SS SLLL K F TLEHRRGQFCS+ RASSSPISPTV PNDE
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE

Query:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
        AEKAKLAQVAKRLEKTS+YF+RLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
Subjt:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD

Query:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ SA
Subjt:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

XP_004136957.1 protein TIC 21, chloroplastic [Cucumis sativus]

9.3e-120

90.53

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Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEA
        MQSLLSPVAR+GPFPA AA+Y+SDLHL+RFHRRP SVRHS       NSLP FSAI  SSSSLLLLK F TL+H RGQ CSE RASSSPISPTVSPNDEA
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEA

Query:  EKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADV
        EKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADV
Subjt:  EKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADV

Query:  VNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        VNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQ ASPGNSPVLALDVFLVQ SA
Subjt:  VNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

XP_022952785.1 protein TIC 21, chloroplastic [Cucurbita moschata]

2.9e-121

90.94

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Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE
        MQSLLSPV R GPFP  AA+YTS+LHL+ F+RRPFSVR++SNL SPPNSLPSFSAIRP SS SLLLLK F TLEHRRGQFCS+  ASSSPISPTV PNDE
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE

Query:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
        AEKAKLAQVAKRLEKTS+YFKRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
Subjt:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD

Query:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ SA
Subjt:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

XP_022972396.1 protein TIC 21, chloroplastic [Cucurbita maxima]

9.3e-120

89.81

Show/hide

Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE
        MQSLLSPV R GPFP +AA+YTS+LHL+ F+RRPFSVR++SNL SP NSLPSFSAIRP SS SLLLLK F  LEHRRGQFCS+ RASSSPISPTV PNDE
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE

Query:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
        AEKAKLAQVAKRLEKTS+YFKRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
Subjt:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD

Query:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQG  PGNSPVLALDVFLVQ SA
Subjt:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

XP_038888764.1 protein TIC 21, chloroplastic [Benincasa hispida]

1.9e-125

93.21

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Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIR-PSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE
        MQSLLSPVARSGPFPAAAA+Y+SDLHL+RFHRRPFSVRHSSNLNSPPNSL SF+A+R  SSSSLLLLK F TLEHRRGQF SE  ASSSPISP V PNDE
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIR-PSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE

Query:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
        A+KAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
Subjt:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD

Query:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        VVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ SA
Subjt:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4J8 Uncharacterized protein

4.5e-120

90.53

Show/hide

Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEA
        MQSLLSPVAR+GPFPA AA+Y+SDLHL+RFHRRP SVRHS       NSLP FSAI  SSSSLLLLK F TL+H RGQ CSE RASSSPISPTVSPNDEA
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEA

Query:  EKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADV
        EKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADV
Subjt:  EKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADV

Query:  VNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        VNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQ ASPGNSPVLALDVFLVQ SA
Subjt:  VNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

A0A1S3C0L3 protein TIC 21, chloroplastic

1.0e-116

86.76

Show/hide

Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAI--------RPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISP
        MQSLLSPVAR+GPFP  AA+Y+SD HL+R HRRPFSVRHS       NSLP FSAI          SSSSLLLLK F TLEHRRGQ CSE RASSSPISP
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAI--------RPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISP

Query:  TVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPS
        TV PNDEAEKAKLAQVAKRLEKTS+YFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKI SPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPS
Subjt:  TVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPS

Query:  KAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        KAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQ ASPGNSPVLALDVFLVQ SA
Subjt:  KAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

A0A5A7SP50 Protein TIC 21

1.0e-116

86.76

Show/hide

Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAI--------RPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISP
        MQSLLSPVAR+GPFP  AA+Y+SD HL+R HRRPFSVRHS       NSLP FSAI          SSSSLLLLK F TLEHRRGQ CSE RASSSPISP
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAI--------RPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISP

Query:  TVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPS
        TV PNDEAEKAKLAQVAKRLEKTS+YFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKI SPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPS
Subjt:  TVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPS

Query:  KAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        KAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQ ASPGNSPVLALDVFLVQ SA
Subjt:  KAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

A0A6J1GMQ4 protein TIC 21, chloroplastic

1.4e-121

90.94

Show/hide

Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE
        MQSLLSPV R GPFP  AA+YTS+LHL+ F+RRPFSVR++SNL SPPNSLPSFSAIRP SS SLLLLK F TLEHRRGQFCS+  ASSSPISPTV PNDE
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE

Query:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
        AEKAKLAQVAKRLEKTS+YFKRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
Subjt:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD

Query:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQ SA
Subjt:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

A0A6J1I5V5 protein TIC 21, chloroplastic

4.5e-120

89.81

Show/hide

Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE
        MQSLLSPV R GPFP +AA+YTS+LHL+ F+RRPFSVR++SNL SP NSLPSFSAIRP SS SLLLLK F  LEHRRGQFCS+ RASSSPISPTV PNDE
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSS-SLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDE

Query:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
        AEKAKLAQVAKRLEKTS+YFKRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD
Subjt:  AEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRAD

Query:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
        VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQG  PGNSPVLALDVFLVQ SA
Subjt:  VVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

SwissProt top hits

e value

%identity

Alignment

Q9SHU7 Protein TIC 21, chloroplastic

5.0e-68

57.61

Show/hide

Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNS-PPNSLPSFSAIRPSSSSLLLLKAFST----------LEHRRGQFCSEIRASSSP
        MQSLL P A S    A A              RP   +HS N  S    SLP F+ +  +      + ++ +          +   +  F     A S P
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNS-PPNSLPSFSAIRPSSSSLLLLKAFST----------LEHRRGQFCSEIRASSSP

Query:  ISPTVSPND-EAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTA
         SP+  P D E +KAKLAQVAKRLEKTS+YFKRLGS+GFWGQLV T+VAAVILSFS+V+TGK TSPATFYATA GI AAF+SVFWSFGYIRLS++L+RT+
Subjt:  ISPTVSPND-EAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTA

Query:  NQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
          P+KAPPRADVV  L++GI+VN+LGMG+A+LGMQATVG LVAKALT+SA P+YQG S G SPVLALDVFLVQ SA
Subjt:  NQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

Arabidopsis top hits

e value

%identity

Alignment

AT2G15290.1 translocon at inner membrane of chloroplasts 21

3.6e-69

57.61

Show/hide

Query:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNS-PPNSLPSFSAIRPSSSSLLLLKAFST----------LEHRRGQFCSEIRASSSP
        MQSLL P A S    A A              RP   +HS N  S    SLP F+ +  +      + ++ +          +   +  F     A S P
Subjt:  MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNS-PPNSLPSFSAIRPSSSSLLLLKAFST----------LEHRRGQFCSEIRASSSP

Query:  ISPTVSPND-EAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTA
         SP+  P D E +KAKLAQVAKRLEKTS+YFKRLGS+GFWGQLV T+VAAVILSFS+V+TGK TSPATFYATA GI AAF+SVFWSFGYIRLS++L+RT+
Subjt:  ISPTVSPND-EAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTA

Query:  NQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA
          P+KAPPRADVV  L++GI+VN+LGMG+A+LGMQATVG LVAKALT+SA P+YQG S G SPVLALDVFLVQ SA
Subjt:  NQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGTCGCTACTCTCGCCGGTAGCTCGCAGCGGTCCCTTCCCTGCCGCTGCCGCACTTTATACCTCGGATTTACACCTCAACCGCTTCCATCGCCGGCCCTTCTCTGT
CCGCCACTCGTCCAATCTCAATTCTCCTCCCAATTCCCTCCCTTCATTTAGTGCCATTCGACCTTCTTCTTCTTCGTTGTTGCTTTTAAAGGCTTTTAGTACTCTGGAGC
ATCGAAGAGGACAGTTTTGCTCGGAAATACGCGCTTCTTCTAGTCCCATTTCGCCGACAGTTTCCCCTAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAG
AGATTAGAAAAGACATCGAAATATTTCAAGAGGTTAGGTAGTCTCGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCCGTTATTCTTTCGTTCTCTGTTGTCAT
CACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCCGTATTTTGGTCCTTTGGTTACATTCGGCTTTCTGATAAGC
TTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCCCGAGCTGATGTTGTGAATAGCCTAAAAAATGGAATAGTGGTGAACCTACTGGGCATGGGTGCTGCCATTCTG
GGGATGCAAGCGACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGGAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTCTGGATGT
ATTCCTAGTACAGGTCTCGGCCTTTTACCAGTGGTATATAGTGATTTTAACAATGGGAACAGTGAATGTCATGTATGCTTTATTGATTGCTAGAGCAGATCGTTCTACTT
CTCCTGTAACTAATGGCAGTCATGAGAGCTTCTGCAAACACTATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTACCTGCTAC
GGAGGTTATTCCTATTCCCCGAATAGCATAACCTCCACCATCGCCCTTCCAGTCAGTTAA

mRNA sequence

Show/hide mRNA sequence

AGAACATCCCCAAAACCCATCAAAACGCTAACTACTATAACATCCACTGTAGGCTCTCTGCCTGCAGCGCTATCAAAATTGTATTTGATCGTCAATCATGCAGTCGCTAC
TCTCGCCGGTAGCTCGCAGCGGTCCCTTCCCTGCCGCTGCCGCACTTTATACCTCGGATTTACACCTCAACCGCTTCCATCGCCGGCCCTTCTCTGTCCGCCACTCGTCC
AATCTCAATTCTCCTCCCAATTCCCTCCCTTCATTTAGTGCCATTCGACCTTCTTCTTCTTCGTTGTTGCTTTTAAAGGCTTTTAGTACTCTGGAGCATCGAAGAGGACA
GTTTTGCTCGGAAATACGCGCTTCTTCTAGTCCCATTTCGCCGACAGTTTCCCCTAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAGAGATTAGAAAAGA
CATCGAAATATTTCAAGAGGTTAGGTAGTCTCGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCCGTTATTCTTTCGTTCTCTGTTGTCATCACCGGGAAAATT
ACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCCGTATTTTGGTCCTTTGGTTACATTCGGCTTTCTGATAAGCTTCAACGGACTGC
AAATCAACCCTCCAAGGCTCCTCCCCGAGCTGATGTTGTGAATAGCCTAAAAAATGGAATAGTGGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGA
CGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGGAGCCTCCCCTGGGAATAGCCCTGTTCTTGCTCTGGATGTATTCCTAGTACAG
GTCTCGGCCTTTTACCAGTGGTATATAGTGATTTTAACAATGGGAACAGTGAATGTCATGTATGCTTTATTGATTGCTAGAGCAGATCGTTCTACTTCTCCTGTAACTAA
TGGCAGTCATGAGAGCTTCTGCAAACACTATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTACCTGCTACGGAGGTTATTCCT
ATTCCCCGAATAGCATAACCTCCACCATCGCCCTTCCAGTCAGTTAATCCAGCAGCAGATTCAACATCCAAGGCAACACAATACGAATTGCTCACGAGTTTAGTGTCCAT
TTTCAAGCGTAATCAAAGGCATTTGTATTTTTGTCTCACCCATCTGATCGGGGTACTCTCTTTTCTGATGTTGGTGGAAATCAAAAGCCTCTCTTGATATGGGACTTGAA
TAGTTACAAAGGTCCTTGAAGGTGTTTTCTGAGGGTAGCTTAAATGGAAGTTTCTTGTATTTGTATTAGAAGAATGGCAAGCCATGTCAAACTCTTCTCTTAAAGTGTAG
ATTCAATGATGGTTCTATCTCGAGTTTTAAATCTCTCATCCATTTTAATATTTACTTTGTTTTTTTCTTCTTTTAATGGAAAACATTTACATGGTTGAAACTTTGGTAAT
GGTTGTTTTCTATATTTGGTTTATGAAATTTTAATTTTAATTTTTAAGCACTATTTGAT

Protein sequence

Show/hide protein sequence

MQSLLSPVARSGPFPAAAALYTSDLHLNRFHRRPFSVRHSSNLNSPPNSLPSFSAIRPSSSSLLLLKAFSTLEHRRGQFCSEIRASSSPISPTVSPNDEAEKAKLAQVAK
RLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAIL
GMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQVSAFYQWYIVILTMGTVNVMYALLIARADRSTSPVTNGSHESFCKHYSLSFPGARFLVGATALGDITCY
GGYSYSPNSITSTIALPVS

Lsi03G005300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome